source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	61499844	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	17	A2,A8,B103,B105,B123,B124,B35,B55,B6,B99,C23,C31,C38,C49,C67,C70,D10
typical_cds_rare	Chr3	61499852	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	B49
typical_cds_rare	Chr3	61499855	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	3	B140,B34,B83
typical_cds_rare	Chr3	61499868	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	5	A15,A5,B40,B47,B6
lof_cds	Chr3	61499886	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	B105
typical_cds_rare	Chr3	61499886	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	B105
typical_cds_rare	Chr3	61499921	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	3	A8,C31,C77
lof_cds	Chr3	61499976	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	C49
typical_cds_rare	Chr3	61499976	TCA	T	INDEL	2bp_deletion	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	C49
lof_cds	Chr3	61499979	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	C49
typical_cds_rare	Chr3	61499979	T	TTG	INDEL	2bp_insertion	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	C49
typical_cds_rare	Chr3	61499986	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	B83
typical_cds_rare	Chr3	61500008	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	C49
typical_cds_rare	Chr3	61500021	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	B83
typical_cds_rare	Chr3	61500033	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	5	B81,C5,C68,C74,D1
typical_cds_rare	Chr3	61500072	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	C10,C18
typical_cds_rare	Chr3	61500074	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	B60,C23
typical_cds_rare	Chr3	61500129	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	3	B109,C36,C59
typical_cds_rare	Chr3	61500136	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	B56,B96
typical_cds_rare	Chr3	61500151	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	B56,B96
typical_cds_rare	Chr3	61501134	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	B134,D9
typical_cds_rare	Chr3	61501143	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	C54
typical_cds_rare	Chr3	61501151	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	3	C66,C74,D7
typical_cds_rare	Chr3	61501156	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	B23,B83
typical_cds_rare	Chr3	61501162	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	B23,B83
typical_cds_rare	Chr3	61501236	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	5	B136,B137,C32,C68,C74
typical_cds_rare	Chr3	61501241	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	A20
typical_cds_rare	Chr3	61501267	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	B136,C25
typical_cds_rare	Chr3	61501274	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	A20,B30
typical_cds_rare	Chr3	61501320	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	4	A19,B129,B13,C22
typical_cds_rare	Chr3	61501344	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	3	B33,B53,D6
typical_cds_rare	Chr3	61501426	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	5	B129,B13,B64,C22,C29
typical_cds_rare	Chr3	61501465	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	C60
typical_cds_rare	Chr3	61501500	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	5	A20,C21,C60,C62,C71
typical_cds_rare	Chr3	61501656	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	5	B15,B67,C40,C54,D10
lof_cds	Chr3	61501683	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	B109
typical_cds_rare	Chr3	61501683	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	B109
typical_cds_rare	Chr3	61501700	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	B101
typical_cds_rare	Chr3	61501740	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	A7
typical_cds_rare	Chr3	61501741	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	D10
typical_cds_rare	Chr3	61501797	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	B101
typical_cds_rare	Chr3	61501853	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	C62,D1
typical_cds_rare	Chr3	61501899	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	D1
typical_cds_rare	Chr3	61501914	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	3	B86,C1,C62
typical_cds_rare	Chr3	61501916	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	5	B32,B34,B96,C14,D6
typical_cds_rare	Chr3	61501926	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	C24
typical_cds_rare	Chr3	61501932	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	A5
typical_cds_rare	Chr3	61501981	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	4	A11,B120,B62,B8
typical_cds_rare	Chr3	61501998	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	B103,B32
typical_cds_rare	Chr3	61502013	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	5	A23,A6,B132,B68,C86
typical_cds_rare	Chr3	61502020	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	5	B118,B121,B46,C53,C77
typical_cds_rare	Chr3	61502032	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	A6,C3
typical_cds_rare	Chr3	61502052	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	C33,C69
typical_cds_rare	Chr3	61502088	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	B48
typical_cds_rare	Chr3	61502127	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	4	B26,B43,C53,D4
typical_cds_rare	Chr3	61502171	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	C79
typical_cds_rare	Chr3	61502179	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	C50,C81
typical_cds_rare	Chr3	61502190	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	3	C11,C23,C73
typical_cds_rare	Chr3	61502193	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	3	A11,B132,C3
typical_cds_rare	Chr3	61502249	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	3	B113,C79,D1
typical_cds_rare	Chr3	61502269	CT	*	INDEL	1bp_deletion	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	B106
lof_cds	Chr3	61502273	T	TAG	INDEL	2bp_insertion	frameshift_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	C4
typical_cds_rare	Chr3	61502273	T	TAG	INDEL	2bp_insertion	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	C4
typical_cds_rare	Chr3	61502289	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	B104
typical_cds_rare	Chr3	61502292	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	A9,B77
lof_cds	Chr3	61502298	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	A11
typical_cds_rare	Chr3	61502298	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	A11
typical_cds_rare	Chr3	61502326	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	B19
typical_cds_rare	Chr3	61502341	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	5	A9,B140,B75,B77,C26
typical_cds_rare	Chr3	61502363	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	4	B54,B62,C25,C5
typical_cds_rare	Chr3	61502446	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	B101
lof_cds	Chr3	61502490	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	22	A3,B113,B128,B14,B15,B17,B28,B32,B41,B5,B54,B59,B60,B62,B67,C34,C43,C50,C6,C78,D10,D2
lof_cds	Chr3	61502492	A	ACG	INDEL	2bp_insertion	frameshift_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	18	A3,B113,B128,B14,B15,B17,B28,B41,B5,B54,B60,B62,C34,C43,C50,C6,D10,D2
lof_cds	Chr3	61502496	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	28	A3,B108,B113,B128,B13,B14,B15,B17,B19,B28,B30,B32,B41,B5,B54,B62,B67,B83,C34,C36,C39,C43,C49,C50,C6,C78,D10,D2
typical_cds_rare	Chr3	61502543	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	B1,B129
typical_cds_rare	Chr3	61502558	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	A15
typical_cds_rare	Chr3	61502586	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	B18
typical_cds_rare	Chr3	61502595	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	D10
typical_cds_rare	Chr3	61502607	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	C8
typical_cds_rare	Chr3	61502624	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	3	A21,A25,B84
lof_cds	Chr3	61502643	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	7	B123,B4,B60,B76,C32,C41,D9
lof_cds	Chr3	61502675	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	A20,B74
typical_cds_rare	Chr3	61502675	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	A20,B74
typical_cds_rare	Chr3	61502699	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	4	B113,C1,C34,C59
typical_cds_rare	Chr3	61502727	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	B108
lof_cds	Chr3	61502769	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	A5
typical_cds_rare	Chr3	61502769	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	A5
typical_cds_rare	Chr3	61502773	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	3	A3,B108,B62
typical_cds_rare	Chr3	61502823	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	B28,C9
typical_cds_rare	Chr3	61502846	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	B24,C80
lof_cds	Chr3	61502858	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	B56,B96
typical_cds_rare	Chr3	61502858	TGA	T	INDEL	2bp_deletion	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	B56,B96
typical_cds_rare	Chr3	61502908	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	3	B50,C18,C53
typical_cds_rare	Chr3	61502939	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	4	B21,B53,B89,C81
typical_cds_rare	Chr3	61502947	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	5	B31,B97,C15,C54,C86
typical_cds_rare	Chr3	61502968	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	B104
typical_cds_rare	Chr3	61503072	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	A23
typical_cds_rare	Chr3	61503079	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	A23
typical_cds_rare	Chr3	61503082	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	B93,C19
typical_cds_rare	Chr3	61503136	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	3	B13,C27,D3
typical_cds_rare	Chr3	61503159	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	B45
typical_cds_rare	Chr3	61503164	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	2	C27,D3
typical_cds_rare	Chr3	61503184	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	A25
typical_cds_rare	Chr3	61503260	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	4	B113,B15,C34,D10
typical_cds_rare	Chr3	61503285	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	B134
lof_cds	Chr3	61503286	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	15	A19,B117,B129,B13,B134,B17,B32,B56,B96,B97,C22,C54,C60,C86,D9
typical_cds_rare	Chr3	61503300	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131015196	SmilChr03G004313	131015196	rna-XM_057943470.1	1	A23