source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	61575851	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	16	A3,B103,B107,B121,B19,B30,B54,B62,C25,C36,C5,C52,C61,C85,C9,D7
lof_cds	Chr3	61575888	CTG	C	INDEL	2bp_deletion	frameshift_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	38	A1,A10,A11,A16,B10,B102,B121,B127,B139,B17,B21,B32,B58,B62,B73,B76,B81,C10,C18,C20,C25,C28,C41,C45,C5,C52,C53,C56,C66,C72,C73,C74,C75,C76,C77,C80,C9,D6
typical_cds_rare	Chr3	61575915	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	4	B121,C5,C53,C77
lof_cds	Chr3	61575934	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	2	B133,B15
typical_cds_rare	Chr3	61575934	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	2	B133,B15
typical_cds_rare	Chr3	61575973	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	4	B103,B54,B62,C5
typical_cds_rare	Chr3	61575979	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	1	C54
typical_cds_rare	Chr3	61576003	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	1	C12
typical_cds_rare	Chr3	61576034	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	1	D1
lof_cds	Chr3	61576076	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	6	A10,A8,B118,B135,C58,C8
lof_cds	Chr3	61576114	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	3	B3,C27,C53
typical_cds_rare	Chr3	61576114	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	3	B3,C27,C53
lof_cds	Chr3	61576147	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	40	A11,A13,A14,A5,B11,B110,B124,B125,B135,B21,B26,B29,B38,B39,B42,B43,B45,B52,B53,B54,B55,B70,B90,B92,B97,C11,C2,C21,C22,C29,C3,C36,C43,C62,C69,C71,C78,C83,C84,D4
lof_cds	Chr3	61576151	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	8	B104,B33,B51,B6,B67,C63,C70,D2
typical_cds_rare	Chr3	61576178	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	2	B27,C54
typical_cds_rare	Chr3	61576215	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	5	B68,C33,C64,C66,C87
lof_cds	Chr3	61576245	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	52	A20,A21,A3,A5,A7,A8,A9,B113,B119,B122,B21,B22,B26,B35,B36,B4,B47,B56,B61,B62,B67,B69,B71,B75,B77,B78,B84,B91,B93,B95,B96,C11,C13,C15,C17,C23,C24,C26,C27,C38,C4,C40,C43,C45,C50,C51,C6,C69,C79,C81,D2,D8
lof_cds	Chr3	61576253	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	8	A18,B100,B104,B21,B22,B5,C71,D10
lof_cds	Chr3	61576316	T	TTA	INDEL	2bp_insertion	frameshift_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	63	A11,A13,A14,A7,B104,B11,B110,B125,B135,B138,B17,B18,B2,B26,B28,B29,B3,B39,B4,B42,B43,B45,B48,B52,B53,B54,B55,B59,B70,B77,B8,B80,B87,B89,B90,B91,B92,B97,C2,C21,C22,C29,C3,C30,C33,C36,C37,C4,C42,C43,C57,C62,C69,C71,C77,C78,C79,C82,C83,C84,C85,C86,D4
lof_cds	Chr3	61576391	G	GGT	INDEL	2bp_insertion	frameshift_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	4	A6,B123,B33,C12
typical_cds_rare	Chr3	61576391	G	GGT	INDEL	2bp_insertion	CDS_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	4	A6,B123,B33,C12
typical_cds_rare	Chr3	61578345	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	1	D10
typical_cds_rare	Chr3	61578349	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	5	B129,B14,B16,C10,C73
typical_cds_rare	Chr3	61578374	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	1	D10
typical_cds_rare	Chr3	61578376	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	1	B111
lof_cds	Chr3	61578383	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	5	B25,B38,B39,B66,B89
typical_cds_rare	Chr3	61578383	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	5	B25,B38,B39,B66,B89
typical_cds_rare	Chr3	61578391	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	1	D10
typical_cds_rare	Chr3	61578396	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	1	D10
typical_cds_rare	Chr3	61578874	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	1	C18
lof_cds	Chr3	61578890	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	3	B36,C1,C18
typical_cds_rare	Chr3	61578890	ACC	A	INDEL	2bp_deletion	CDS_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	3	B36,C1,C18
typical_cds_rare	Chr3	61578907	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019098	SmilChr03G004321	131019098	rna-XM_057947781.1	5	A6,B109,B12,C20,C54