source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	62687751	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	3	A14,B18,C67
lof_cds	Chr3	62687759	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	18	A20,A21,A24,B10,B103,B110,B12,B13,B34,B70,B75,B8,C17,C27,C55,C69,C7,D7
typical_cds_rare	Chr3	62687786	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	4	B14,B41,C10,D3
typical_cds_rare	Chr3	62687787	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	4	B25,B55,B91,C31
typical_cds_rare	Chr3	62687789	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	1	B24
lof_cds	Chr3	62687795	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	14	A15,B121,B134,B25,B26,B28,B46,B55,B82,B91,C14,C31,C87,C9
lof_cds	Chr3	62687802	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	24	B1,B114,B118,B126,B127,B137,B140,B18,B35,B48,B5,B51,B63,B69,B70,B80,B83,B86,C28,C37,C53,C59,C71,C80
typical_cds_rare	Chr3	62687839	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	5	B131,B14,B41,C48,D3
lof_cds	Chr3	62687863	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	1	A14
typical_cds_rare	Chr3	62687863	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	1	A14
typical_cds_rare	Chr3	62687894	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	1	A11
typical_cds_rare	Chr3	62687920	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	5	B124,B79,C23,C56,C74
typical_cds_rare	Chr3	62687923	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	3	B19,B49,B79
typical_cds_rare	Chr3	62687927	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	4	A18,B129,B24,C26
typical_cds_rare	Chr3	62687963	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	1	B140
lof_cds	Chr3	62687972	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	3	B122,B24,C52
typical_cds_rare	Chr3	62687972	G	GAT	INDEL	2bp_insertion	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	3	B122,B24,C52
typical_cds_rare	Chr3	62688016	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	1	C43
typical_cds_rare	Chr3	62688036	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	5	A16,B125,B133,B9,C81
typical_cds_rare	Chr3	62688065	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	1	B121
lof_cds	Chr3	62688085	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	1	A4
typical_cds_rare	Chr3	62688085	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	1	A4
typical_cds_rare	Chr3	62688103	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	1	B30
typical_cds_rare	Chr3	62688109	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	1	C44
typical_cds_rare	Chr3	62688121	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	5	B16,B84,C14,C45,D11
lof_cds	Chr3	62688125	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	8	A1,A20,B14,B22,B44,B88,C46,C76
typical_cds_rare	Chr3	62688140	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	2	B24,C81
typical_cds_rare	Chr3	62688143	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	2	B69,C40
typical_cds_rare	Chr3	62688164	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	4	A15,B44,C38,C87
lof_cds	Chr3	62688217	CCT	C	INDEL	2bp_deletion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	149	A1,A10,A14,A15,A16,A18,A19,A2,A20,A23,A24,A3,A5,A6,A7,A8,B1,B10,B100,B102,B103,B104,B105,B106,B108,B11,B110,B111,B112,B114,B115,B119,B121,B122,B123,B124,B125,B127,B128,B129,B132,B133,B135,B137,B139,B14,B15,B16,B17,B23,B24,B25,B27,B3,B31,B32,B35,B36,B37,B39,B40,B41,B43,B44,B45,B49,B51,B52,B53,B54,B58,B59,B6,B60,B61,B62,B63,B64,B66,B68,B69,B7,B75,B76,B79,B84,B85,B86,B89,B9,B90,B92,B93,B94,B95,B98,C10,C12,C13,C16,C18,C19,C2,C23,C24,C26,C27,C29,C30,C31,C34,C36,C38,C39,C4,C44,C46,C49,C5,C55,C58,C6,C61,C62,C63,C64,C66,C7,C70,C74,C75,C76,C77,C80,C81,C82,C84,C85,C86,C87,C9,D1,D10,D3,D4,D5,D6,D7,D8
lof_cds	Chr3	62688222	T	TGC	INDEL	2bp_insertion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	148	A1,A10,A14,A15,A16,A18,A19,A2,A20,A23,A24,A3,A5,A6,A7,A8,B1,B10,B100,B102,B103,B104,B105,B106,B108,B11,B110,B111,B112,B115,B119,B121,B122,B123,B124,B125,B127,B128,B129,B132,B133,B135,B137,B139,B14,B15,B16,B17,B23,B24,B25,B27,B3,B31,B32,B35,B36,B37,B39,B40,B41,B43,B44,B45,B49,B51,B52,B53,B54,B58,B59,B6,B60,B61,B62,B63,B64,B66,B68,B69,B7,B75,B76,B79,B84,B85,B86,B89,B9,B90,B92,B93,B94,B95,B98,C10,C12,C13,C16,C18,C19,C2,C23,C24,C26,C27,C29,C30,C31,C34,C36,C38,C39,C4,C44,C46,C49,C5,C55,C58,C6,C61,C62,C63,C64,C66,C7,C70,C74,C75,C76,C77,C80,C81,C82,C84,C85,C86,C87,C9,D1,D10,D3,D4,D5,D6,D7,D8
lof_cds	Chr3	62688240	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	7	A20,B122,B6,B7,C7,D4,D7
lof_cds	Chr3	62688245	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	4	B106,B125,B59,C61
typical_cds_rare	Chr3	62688245	T	TTG	INDEL	2bp_insertion	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	4	B106,B125,B59,C61
typical_cds_rare	Chr3	62688274	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	1	B37
lof_cds	Chr3	62688305	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	1	C48
typical_cds_rare	Chr3	62688305	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	1	C48
typical_cds_rare	Chr3	62688314	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	1	D11
lof_cds	Chr3	62688338	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	2	B114,B69
typical_cds_rare	Chr3	62688338	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	2	B114,B69
lof_cds	Chr3	62688355	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	25	B1,B126,B127,B137,B140,B18,B28,B35,B4,B46,B48,B5,B51,B63,B70,B80,B83,B86,C28,C37,C53,C59,C71,C77,C80
typical_cds_rare	Chr3	62688366	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	4	A3,B50,C16,C29
typical_cds_rare	Chr3	62688401	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	1	B87
typical_cds_rare	Chr3	62688409	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	4	B1,B129,C84,D11
lof_cds	Chr3	62688417	C	CGT	INDEL	2bp_insertion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	6	B128,B6,B76,C41,C64,D9
lof_cds	Chr3	62688419	G	GCT	INDEL	2bp_insertion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	6	B128,B6,B76,C41,C64,D9
typical_cds_rare	Chr3	62688479	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	5	A22,B53,B71,C42,C76
lof_cds	Chr3	62688507	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	23	A11,A8,B120,B140,B21,B23,B27,B54,B57,B80,B82,B99,C26,C31,C36,C38,C46,C53,C63,C65,C77,C82,C86
typical_cds_rare	Chr3	62688556	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	1	D11
typical_cds_rare	Chr3	62688573	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	3	B50,C85,D5
lof_cds	Chr3	62688587	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	16	A11,A8,B119,B137,B140,B51,B54,B63,B82,B99,C38,C46,C65,C77,C82,C86
typical_cds_rare	Chr3	62688593	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	5	A9,C33,C57,C65,C83
typical_cds_rare	Chr3	62688609	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	2	B76,B98
lof_cds	Chr3	62688622	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	3	A11,B40,B99
typical_cds_rare	Chr3	62688622	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	3	A11,B40,B99
typical_cds_rare	Chr3	62688639	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	4	A1,B65,B67,C76
typical_cds_rare	Chr3	62688663	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	3	A4,C13,C48
lof_cds	Chr3	62688676	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	1	B44
typical_cds_rare	Chr3	62688676	G	GT	INDEL	1bp_insertion	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	1	B44
typical_cds_rare	Chr3	62688690	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	1	C66
typical_cds_rare	Chr3	62688697	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	5	A22,B18,B73,B9,C67
typical_cds_rare	Chr3	62688705	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	3	B118,B37,B57
typical_cds_rare	Chr3	62688727	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	5	B17,B30,B73,C20,C25
typical_cds_rare	Chr3	62688748	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	2	B90,B92
lof_cds	Chr3	62688790	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	13	A16,A9,B118,B135,B138,B33,B36,B54,B57,B69,B8,B85,C38
lof_cds	Chr3	62688801	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	10	A18,A9,B109,B118,B138,B50,B54,C38,C44,C85
typical_cds_rare	Chr3	62688817	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	5	B139,B51,B86,C65,C77
lof_cds	Chr3	62688820	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	7	B1,B117,B126,B22,B57,C4,C86
lof_cds	Chr3	62688834	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	48	A14,A23,A25,A5,A6,B101,B107,B110,B113,B115,B128,B136,B15,B20,B23,B29,B38,B39,B51,B52,B59,B6,B60,B7,B74,B78,B87,B89,B93,B94,B98,C2,C24,C28,C38,C39,C41,C47,C49,C58,C6,C61,C65,C70,C73,C78,D6,D8
typical_cds_rare	Chr3	62688850	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	4	B40,B50,C44,C50
lof_cds	Chr3	62688851	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	6	A2,B31,B64,B85,C54,C60
lof_cds	Chr3	62688879	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	4	B138,B54,C65,C74
typical_cds_rare	Chr3	62688879	TCA	T	INDEL	2bp_deletion	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	4	B138,B54,C65,C74
typical_cds_rare	Chr3	62688890	ATT	*	INDEL	2bp_deletion	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	4	B138,B39,B54,B57
lof_cds	Chr3	62688904	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	4	B118,C40,C52,C71
typical_cds_rare	Chr3	62688904	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	4	B118,C40,C52,C71
lof_cds	Chr3	62688907	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	3	B118,C40,C52
typical_cds_rare	Chr3	62688907	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131015275	SmilChr03G004460	131015275	rna-XM_057943601.1	3	B118,C40,C52