source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	62756656	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	2	A24,C19
typical_cds_rare	Chr3	62756764	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	1	A3
lof_cds	Chr3	62756813	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	6	A21,A24,B115,B70,B91,C61
typical_cds_rare	Chr3	62756867	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	2	B48,C56
typical_cds_rare	Chr3	62756971	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	3	B11,B59,C77
typical_cds_rare	Chr3	62756980	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	4	B130,B53,B71,C24
typical_cds_rare	Chr3	62756985	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	3	A10,B124,C70
lof_cds	Chr3	62757003	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	7	A5,B13,B66,B8,B80,C22,C77
lof_cds	Chr3	62757060	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	3	B111,B90,B92
typical_cds_rare	Chr3	62757060	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	3	B111,B90,B92
typical_cds_rare	Chr3	62757291	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	3	B130,B53,B71
lof_cds	Chr3	62757300	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	40	A20,A8,B1,B105,B111,B119,B122,B13,B138,B17,B2,B22,B24,B40,B59,B60,B62,B65,B67,B8,B87,B88,B90,B92,C17,C25,C30,C40,C43,C44,C45,C49,C5,C51,C54,C62,C71,C8,C84,D10
lof_cds	Chr3	62757330	GAC	G	INDEL	2bp_deletion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	6	A21,A24,B115,B70,B91,C61
typical_cds_rare	Chr3	62757452	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	2	B115,C61
lof_cds	Chr3	62757485	GGC	G	INDEL	2bp_deletion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	9	A15,B122,B125,B128,B35,B36,B45,B64,B73
typical_cds_rare	Chr3	62757603	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	4	B60,C23,C42,C62
typical_cds_rare	Chr3	62757620	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	1	B13
typical_cds_rare	Chr3	62757637	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	1	C45
typical_cds_rare	Chr3	62757784	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	2	C33,D3
typical_cds_rare	Chr3	62757803	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	3	C23,C42,C62
typical_cds_rare	Chr3	62757805	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	1	D10
typical_cds_rare	Chr3	62757820	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	1	B49
lof_cds	Chr3	62757826	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	6	A9,B52,C21,C22,C55,D1
typical_cds_rare	Chr3	62757866	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	3	A16,B9,D11
typical_cds_rare	Chr3	62757983	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	4	B71,C62,C8,D5
typical_cds_rare	Chr3	62757986	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	2	B48,C56
typical_cds_rare	Chr3	62757996	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	2	B7,C70
typical_cds_rare	Chr3	62758035	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	2	B119,B67
typical_cds_rare	Chr3	62758039	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	3	A20,C52,C69
lof_cds	Chr3	62758046	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	1	B38
typical_cds_rare	Chr3	62758046	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	1	B38
lof_cds	Chr3	62758051	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	1	B38
typical_cds_rare	Chr3	62758051	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	1	B38
typical_cds_rare	Chr3	62758167	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	2	B56,B96
lof_cds	Chr3	62758216	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	8	A3,B112,B76,B98,C16,C29,C7,C9
typical_cds_rare	Chr3	62758221	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	4	B104,B137,C80,D11
typical_cds_rare	Chr3	62758297	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	4	B100,C10,C53,D5
lof_cds	Chr3	62758308	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	6	B111,B68,B84,C22,C49,C58
lof_cds	Chr3	62758311	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	6	B111,B68,B84,C22,C49,C58
lof_cds	Chr3	62758345	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	1	A4
typical_cds_rare	Chr3	62758345	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	1	A4
lof_cds	Chr3	62758369	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	2	A14,A4
typical_cds_rare	Chr3	62758369	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	2	A14,A4
lof_cds	Chr3	62758371	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	2	A14,A4
typical_cds_rare	Chr3	62758371	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	2	A14,A4
lof_cds	Chr3	62758380	CTA	C	INDEL	2bp_deletion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	2	A14,A4
typical_cds_rare	Chr3	62758380	CTA	C	INDEL	2bp_deletion	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	2	A14,A4
typical_cds_rare	Chr3	62758406	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	4	A4,B109,B30,C33
typical_cds_rare	Chr3	62758410	TC	*	INDEL	1bp_deletion	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	5	A14,A4,B1,B109,B30
typical_cds_rare	Chr3	62758418	TC	*	INDEL	1bp_deletion	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	3	A14,B1,C19
lof_cds	Chr3	62758422	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	3	A14,B1,C19
typical_cds_rare	Chr3	62758422	T	TTC	INDEL	2bp_insertion	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	3	A14,B1,C19
lof_cds	Chr3	62758423	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	3	B60,C42,C50
typical_cds_rare	Chr3	62758423	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	3	B60,C42,C50
typical_cds_rare	Chr3	62758425	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	1	C33
lof_cds	Chr3	62758429	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	6	A14,A4,B1,B109,B30,C19
lof_cds	Chr3	62758432	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	6	A14,A4,B1,B109,B30,C19
typical_cds_rare	Chr3	62758439	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	1	C50
lof_cds	Chr3	62758555	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	2	C33,D3
typical_cds_rare	Chr3	62758555	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	2	C33,D3
lof_cds	Chr3	62758557	T	TTA	INDEL	2bp_insertion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	5	B105,B80,B89,C61,D8
typical_cds_rare	Chr3	62758557	T	TTA	INDEL	2bp_insertion	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	5	B105,B80,B89,C61,D8
lof_cds	Chr3	62758565	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	7	B105,B52,B80,B89,C23,C61,D8
typical_cds_rare	Chr3	62758590	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	1	B65
typical_cds_rare	Chr3	62758600	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	1	C51
typical_cds_rare	Chr3	62758609	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	2	B93,D10
typical_cds_rare	Chr3	62758624	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	4	B34,B95,C1,C78
lof_cds	Chr3	62758795	GCC	G	INDEL	2bp_deletion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	4	B84,C65,C78,D10
typical_cds_rare	Chr3	62758795	GCC	G	INDEL	2bp_deletion	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	4	B84,C65,C78,D10
lof_cds	Chr3	62758798	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	4	B84,C65,C78,D10
typical_cds_rare	Chr3	62758798	G	GTA	INDEL	2bp_insertion	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	4	B84,C65,C78,D10
lof_cds	Chr3	62758802	G	GCT	INDEL	2bp_insertion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	73	A18,A19,A23,A5,A6,A7,B103,B104,B110,B111,B114,B124,B125,B127,B133,B135,B15,B17,B19,B2,B27,B3,B30,B31,B38,B39,B43,B46,B48,B52,B54,B58,B60,B63,B69,B7,B71,B74,B8,B85,B86,B97,B98,B99,C2,C23,C25,C28,C36,C4,C42,C46,C47,C49,C5,C50,C52,C58,C59,C60,C62,C66,C67,C7,C74,C75,C77,C79,C80,C83,D1,D10,D9
lof_cds	Chr3	62758805	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	11	B17,B21,B34,B56,C14,C46,C52,C7,C73,C80,D5
typical_cds_rare	Chr3	62758820	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015317	SmilChr03G004468	131015317	rna-XM_057943673.1	1	C43