source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	63077531	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	4	B111,C10,C28,C85
typical_cds_rare	Chr3	63077537	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	2	B128,D8
lof_cds	Chr3	63077714	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	238	A1,A10,A11,A13,A15,A16,A18,A19,A2,A20,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,A9,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B111,B112,B113,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B127,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B51,B52,B53,B54,B55,B56,B57,B58,B6,B60,B61,B62,B63,B64,B65,B66,B68,B69,B7,B70,B71,B72,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B86,B88,B89,B9,B90,B92,B93,B94,B95,B97,B98,B99,C1,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C34,C35,C36,C37,C38,C39,C4,C41,C42,C44,C45,C46,C47,C48,C49,C5,C50,C52,C53,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C80,C82,C83,C84,C85,C86,C87,C9,D1,D10,D11,D2,D4,D5,D6,D7,D9
lof_cds	Chr3	63077719	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	227	A1,A10,A11,A13,A15,A16,A18,A19,A2,A20,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,A9,B10,B101,B102,B103,B104,B105,B106,B107,B108,B109,B110,B111,B112,B113,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B127,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B23,B24,B25,B26,B27,B28,B3,B30,B31,B33,B34,B35,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B51,B52,B53,B54,B55,B56,B58,B6,B60,B61,B62,B63,B64,B65,B66,B68,B69,B7,B70,B71,B72,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B86,B88,B89,B9,B90,B92,B93,B94,B95,B97,B98,B99,C1,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C34,C35,C36,C37,C38,C39,C4,C41,C42,C44,C46,C47,C48,C49,C5,C50,C52,C53,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C77,C78,C79,C8,C80,C82,C83,C84,C86,C87,C9,D1,D10,D11,D2,D4,D6,D9
lof_cds	Chr3	63077724	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	227	A1,A10,A11,A13,A14,A15,A16,A18,A19,A2,A22,A23,A25,A3,A4,A5,A6,A7,A8,B1,B10,B101,B102,B103,B104,B105,B106,B107,B108,B109,B111,B112,B113,B114,B115,B117,B118,B119,B12,B120,B122,B123,B124,B125,B126,B127,B128,B129,B13,B130,B132,B133,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B32,B33,B34,B35,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B48,B49,B5,B51,B52,B53,B54,B55,B56,B58,B6,B60,B61,B62,B63,B64,B65,B66,B67,B68,B69,B7,B71,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C41,C42,C44,C46,C47,C48,C49,C5,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C65,C68,C7,C71,C72,C73,C74,C75,C77,C78,C79,C8,C80,C81,C82,C83,C84,C86,C87,C9,D1,D10,D11,D2,D4,D6,D8,D9
typical_cds_rare	Chr3	63077732	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	1	B126
lof_cds	Chr3	63077736	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	1	B63
typical_cds_rare	Chr3	63077736	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	1	B63
typical_cds_rare	Chr3	63077752	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	5	B28,B76,B98,C54,C86
lof_cds	Chr3	63077757	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	14	A13,B108,B133,B27,B30,B56,B96,C1,C20,C23,C25,C35,C52,C7
typical_cds_rare	Chr3	63078063	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	1	B106
typical_cds_rare	Chr3	63078249	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	5	B13,B15,B21,B32,B48
lof_cds	Chr3	63078404	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	2	B113,D9
typical_cds_rare	Chr3	63078404	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	2	B113,D9
typical_cds_rare	Chr3	63078443	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	3	B118,B46,B48
typical_cds_rare	Chr3	63078560	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	2	B139,B79
typical_cds_rare	Chr3	63078580	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	1	C28
typical_cds_rare	Chr3	63078584	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	1	B98
typical_cds_rare	Chr3	63078589	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	2	B21,C85
typical_cds_rare	Chr3	63078595	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	1	C75
typical_cds_rare	Chr3	63078600	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	2	B49,B79
typical_cds_rare	Chr3	63078603	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	1	C75
typical_cds_rare	Chr3	63078629	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	1	B84
typical_cds_rare	Chr3	63078653	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	3	B119,B59,C37
lof_cds	Chr3	63078785	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	11	A7,B119,B124,B4,B40,B67,C22,C27,C48,C63,C79
lof_cds	Chr3	63078792	CCA	C	INDEL	2bp_deletion	frameshift_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	7	A19,A8,B1,B67,B68,C76,C8
typical_cds_rare	Chr3	63078975	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	2	B79,C83
typical_cds_rare	Chr3	63079014	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	1	C75
typical_cds_rare	Chr3	63079105	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	3	B1,B13,D11
typical_cds_rare	Chr3	63079109	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	1	C79
typical_cds_rare	Chr3	63079126	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	2	A8,B76
lof_cds	Chr3	63079195	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	2	A19,B48
typical_cds_rare	Chr3	63079195	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	2	A19,B48
lof_cds	Chr3	63079206	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	26	A16,A18,A24,B102,B11,B123,B131,B135,B138,B14,B19,B25,B31,B36,B60,B72,C19,C37,C55,C66,C67,C75,C83,C87,C9,D4
lof_cds	Chr3	63079208	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	174	A1,A10,A11,A13,A15,A16,A18,A19,A2,A20,A21,A22,A23,A25,A3,A4,A5,A7,B10,B100,B103,B106,B107,B109,B112,B113,B114,B115,B117,B12,B120,B124,B125,B126,B129,B13,B130,B132,B133,B134,B137,B139,B140,B15,B16,B17,B18,B2,B20,B21,B22,B26,B27,B28,B3,B31,B34,B38,B39,B4,B40,B41,B44,B45,B46,B47,B48,B50,B51,B54,B55,B57,B58,B59,B6,B61,B62,B64,B65,B66,B67,B70,B71,B73,B74,B75,B76,B77,B79,B8,B80,B81,B82,B83,B84,B85,B86,B89,B90,B92,B93,B94,B95,B98,C10,C11,C12,C13,C14,C15,C16,C18,C19,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C31,C33,C34,C35,C36,C38,C39,C4,C41,C42,C44,C45,C46,C47,C48,C49,C50,C51,C53,C54,C57,C58,C59,C6,C60,C61,C62,C63,C65,C67,C69,C7,C70,C71,C72,C73,C74,C76,C78,C82,C85,C86,C87,D10,D2,D3,D5,D6,D7,D9
lof_cds	Chr3	63079219	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	192	A1,A10,A11,A13,A15,A16,A18,A19,A2,A20,A21,A22,A23,A24,A25,A3,A4,A5,A7,B100,B102,B103,B106,B107,B109,B11,B112,B113,B114,B115,B117,B12,B120,B123,B124,B125,B126,B129,B13,B130,B131,B132,B133,B134,B135,B137,B138,B139,B14,B140,B16,B17,B18,B19,B2,B20,B21,B22,B25,B26,B27,B28,B3,B31,B34,B36,B38,B39,B4,B40,B41,B45,B46,B47,B48,B50,B51,B54,B55,B57,B58,B59,B6,B60,B61,B62,B64,B65,B66,B67,B70,B71,B72,B73,B74,B75,B76,B77,B79,B8,B80,B81,B82,B83,B84,B85,B86,B89,B90,B92,B93,B94,B95,B98,C10,C11,C12,C13,C14,C15,C16,C18,C19,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C31,C33,C34,C35,C36,C37,C38,C39,C4,C41,C42,C44,C45,C46,C48,C49,C50,C51,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C65,C66,C67,C69,C7,C70,C71,C72,C73,C74,C75,C76,C78,C82,C83,C85,C86,C87,C9,D10,D11,D2,D3,D4,D5,D6,D7,D9
typical_cds_rare	Chr3	63079222	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	2	B132,C70
typical_cds_rare	Chr3	63079359	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	5	B10,B113,B79,C73,C74
lof_cds	Chr3	63079376	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	1	C82
typical_cds_rare	Chr3	63079376	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	1	C82
typical_cds_rare	Chr3	63079397	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	1	B95
typical_cds_rare	Chr3	63079423	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	3	B119,B59,C37
typical_cds_rare	Chr3	63079558	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	2	B134,C74
typical_cds_rare	Chr3	63079603	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015395	SmilChr03G004496	131015395	rna-XM_057943775.1	1	C38