source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	63677129	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	1	B89
typical_cds_rare	Chr3	63677160	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	2	A15,C51
typical_cds_rare	Chr3	63677658	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	4	B38,B39,C38,C62
typical_cds_rare	Chr3	63677661	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	1	C15
lof_cds	Chr3	63677697	C	CAG	INDEL	2bp_insertion	frameshift_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	1	B32
typical_cds_rare	Chr3	63677697	C	CAG	INDEL	2bp_insertion	CDS_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	1	B32
typical_cds_rare	Chr3	63677771	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	3	B38,B39,C62
lof_cds	Chr3	63677802	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	48	A11,A13,A2,A23,A6,A8,B100,B108,B11,B112,B114,B119,B12,B121,B125,B130,B17,B2,B26,B33,B35,B42,B53,B57,B58,B62,B63,B65,B69,B73,B84,B86,B87,B90,C10,C2,C4,C41,C50,C58,C59,C62,C75,C76,C80,C83,C84,D2
lof_cds	Chr3	63677837	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	178	A1,A10,A11,A15,A18,A2,A22,A25,A3,A4,A5,A7,A9,B100,B101,B103,B104,B105,B107,B108,B11,B110,B111,B112,B114,B117,B118,B12,B120,B121,B122,B123,B125,B130,B131,B132,B133,B134,B135,B138,B139,B140,B15,B18,B19,B2,B21,B22,B24,B26,B27,B3,B30,B32,B33,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B51,B53,B57,B58,B6,B60,B61,B62,B65,B66,B69,B7,B70,B71,B72,B74,B75,B76,B77,B79,B82,B83,B85,B86,B87,B88,B89,B90,B92,B95,B98,B99,C1,C11,C13,C14,C15,C17,C18,C19,C2,C20,C21,C22,C23,C25,C26,C27,C28,C29,C3,C31,C32,C33,C35,C36,C38,C4,C40,C41,C42,C43,C44,C46,C47,C48,C49,C5,C51,C53,C54,C55,C56,C57,C59,C6,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C73,C74,C76,C77,C78,C80,C81,C82,C83,C85,C86,C87,C9,D1,D10,D11,D2,D3,D5,D7,D9
lof_cds	Chr3	63677838	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	203	A1,A10,A13,A14,A16,A18,A19,A20,A21,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B101,B102,B103,B104,B106,B107,B108,B109,B11,B110,B112,B113,B114,B115,B117,B119,B12,B121,B122,B123,B124,B126,B127,B128,B129,B13,B131,B132,B134,B136,B137,B14,B140,B15,B16,B17,B18,B19,B20,B21,B22,B23,B25,B26,B27,B28,B29,B3,B30,B31,B34,B35,B36,B38,B39,B4,B40,B41,B42,B44,B45,B47,B5,B50,B51,B52,B54,B55,B56,B58,B59,B6,B62,B63,B64,B65,B66,B67,B68,B69,B7,B70,B72,B73,B75,B76,B78,B79,B8,B80,B81,B83,B84,B85,B88,B9,B91,B93,B94,B96,B97,B98,B99,C1,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C20,C23,C24,C25,C26,C27,C3,C30,C32,C33,C34,C35,C36,C37,C39,C4,C41,C43,C44,C45,C46,C47,C48,C49,C50,C51,C52,C53,C55,C57,C58,C59,C6,C60,C61,C63,C64,C65,C66,C67,C68,C69,C70,C71,C72,C73,C74,C75,C78,C79,C8,C81,C82,C83,C84,C85,C86,C9,D11,D2,D3,D4,D6,D7,D8,D9
lof_cds	Chr3	63677840	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	143	A10,A18,A20,A23,A24,A6,A8,B1,B100,B102,B103,B107,B109,B11,B112,B113,B114,B118,B119,B12,B120,B122,B123,B124,B125,B128,B13,B130,B131,B132,B133,B136,B138,B139,B14,B140,B17,B2,B20,B24,B26,B28,B3,B30,B31,B34,B35,B37,B40,B42,B43,B45,B48,B49,B5,B50,B55,B56,B57,B58,B59,B6,B62,B64,B65,B66,B67,B68,B69,B70,B73,B74,B75,B76,B77,B78,B79,B80,B81,B84,B86,B87,B88,B9,B90,B91,B93,B95,B96,B98,C10,C11,C15,C16,C2,C22,C24,C25,C27,C28,C29,C36,C39,C4,C40,C41,C43,C44,C45,C46,C47,C48,C49,C5,C50,C53,C56,C58,C59,C6,C61,C62,C67,C68,C69,C70,C72,C75,C76,C80,C81,C83,C84,C86,C87,C9,D11,D2,D4,D6,D7,D8,D9
typical_cds_rare	Chr3	63678070	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	5	B44,C27,C40,C45,C50
typical_cds_rare	Chr3	63678138	GC	*	INDEL	1bp_deletion	CDS_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	3	B65,B78,B88
typical_cds_rare	Chr3	63678299	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	5	A2,B72,C40,C44,C80
typical_cds_rare	Chr3	63678540	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	1	B126
typical_cds_rare	Chr3	63678565	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	2	B44,C62
lof_cds	Chr3	63678731	TAC	T	INDEL	2bp_deletion	frameshift_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	50	A10,A18,A2,A22,A23,A6,A7,A9,B100,B105,B108,B12,B121,B14,B2,B3,B30,B36,B42,B43,B46,B48,B50,B53,B59,B60,B62,B65,B66,B72,B73,B76,B77,B87,B9,B92,C13,C20,C24,C28,C30,C32,C34,C4,C47,C53,C59,C68,C71,C84
lof_cds	Chr3	63678736	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	49	A10,A18,A2,A22,A23,A6,A7,A9,B100,B105,B108,B12,B121,B14,B2,B3,B30,B36,B42,B43,B46,B48,B50,B53,B59,B60,B62,B65,B66,B72,B73,B76,B77,B87,B9,B92,C13,C20,C24,C30,C32,C34,C4,C47,C53,C59,C68,C71,C84
typical_cds_rare	Chr3	63678971	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	1	C52
lof_cds	Chr3	63678977	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	81	A10,A11,A16,A21,A24,B100,B101,B102,B103,B104,B108,B114,B118,B120,B122,B123,B125,B130,B131,B139,B14,B2,B22,B25,B27,B3,B31,B33,B36,B37,B5,B51,B57,B62,B72,B83,B87,B90,B92,B94,B95,B98,B99,C1,C11,C13,C16,C19,C2,C21,C25,C26,C27,C29,C3,C31,C33,C36,C43,C54,C55,C56,C59,C64,C65,C66,C67,C69,C7,C73,C75,C76,C77,C83,C84,C87,C9,D1,D2,D4,D9
lof_cds	Chr3	63678979	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	201	A1,A11,A13,A15,A16,A18,A19,A2,A20,A21,A22,A23,A24,A25,A3,A4,A5,A7,A9,B1,B10,B100,B101,B102,B103,B104,B105,B106,B108,B109,B11,B110,B111,B112,B113,B114,B115,B117,B119,B12,B120,B121,B122,B124,B125,B127,B128,B129,B13,B130,B131,B132,B133,B134,B137,B139,B140,B15,B16,B17,B18,B2,B20,B21,B22,B23,B24,B25,B26,B29,B31,B32,B33,B34,B35,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B52,B53,B54,B55,B56,B57,B58,B6,B61,B62,B63,B66,B67,B68,B69,B7,B70,B72,B73,B74,B77,B78,B81,B82,B83,B84,B85,B86,B87,B88,B89,B9,B90,B91,B93,B95,B98,B99,C1,C11,C12,C13,C16,C17,C20,C21,C22,C23,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C4,C40,C41,C43,C44,C45,C46,C47,C48,C49,C5,C51,C52,C53,C54,C55,C56,C57,C58,C6,C60,C61,C62,C63,C65,C66,C67,C68,C69,C7,C70,C71,C73,C75,C77,C79,C80,C81,C82,C84,C85,C87,C9,D1,D11,D2,D3,D4,D5,D6
lof_cds	Chr3	63678982	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	220	A1,A10,A11,A13,A15,A16,A18,A19,A2,A20,A21,A22,A23,A24,A25,A3,A4,A5,A7,A9,B1,B10,B100,B101,B103,B104,B105,B106,B108,B109,B11,B110,B111,B112,B113,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B127,B128,B129,B13,B130,B131,B132,B133,B134,B137,B139,B14,B140,B15,B16,B17,B18,B2,B20,B21,B22,B23,B24,B25,B26,B27,B29,B3,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B5,B51,B52,B53,B54,B55,B56,B57,B58,B6,B61,B62,B63,B66,B67,B68,B69,B7,B70,B72,B73,B74,B77,B78,B80,B81,B82,B83,B84,B85,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B98,B99,C1,C11,C12,C13,C16,C17,C19,C2,C20,C21,C22,C23,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C4,C40,C41,C43,C44,C45,C46,C47,C48,C49,C5,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C73,C75,C76,C77,C79,C8,C80,C81,C82,C83,C84,C85,C87,C9,D1,D11,D2,D3,D4,D5,D6,D9
lof_cds	Chr3	63679012	C	CGT	INDEL	2bp_insertion	frameshift_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	196	A1,A11,A13,A15,A16,A18,A19,A2,A20,A21,A22,A23,A24,A25,A3,A4,A5,A9,B1,B100,B101,B102,B103,B104,B105,B106,B108,B109,B11,B110,B111,B113,B114,B115,B117,B119,B12,B120,B121,B122,B124,B125,B127,B128,B129,B13,B131,B132,B133,B134,B137,B140,B15,B16,B17,B18,B2,B20,B22,B23,B24,B25,B26,B29,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B44,B45,B46,B47,B48,B49,B52,B53,B54,B55,B56,B58,B6,B61,B62,B63,B66,B67,B68,B69,B7,B70,B71,B72,B73,B74,B77,B78,B79,B81,B82,B83,B84,B85,B86,B87,B88,B89,B9,B90,B91,B93,B94,B95,B98,B99,C1,C11,C12,C13,C16,C17,C2,C20,C21,C22,C23,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C4,C40,C41,C43,C44,C45,C46,C47,C48,C49,C5,C51,C52,C53,C54,C55,C56,C57,C58,C6,C60,C62,C63,C65,C66,C67,C68,C69,C70,C71,C73,C75,C77,C79,C80,C81,C82,C84,C85,C87,C9,D11,D2,D3,D4,D5,D6
lof_cds	Chr3	63679015	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	173	A1,A11,A13,A15,A18,A19,A2,A20,A22,A23,A24,A25,A3,A4,A9,B1,B100,B101,B102,B103,B104,B105,B106,B108,B109,B11,B110,B111,B113,B114,B115,B119,B12,B120,B121,B125,B127,B128,B129,B13,B131,B132,B133,B137,B15,B17,B18,B2,B20,B22,B23,B24,B25,B26,B29,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B44,B45,B46,B47,B48,B49,B52,B53,B54,B55,B56,B58,B6,B61,B62,B63,B66,B68,B69,B70,B71,B72,B73,B74,B79,B81,B82,B83,B84,B85,B86,B87,B88,B89,B9,B91,B93,B94,B98,B99,C1,C11,C12,C13,C16,C17,C2,C20,C21,C22,C23,C25,C26,C27,C28,C29,C3,C31,C32,C33,C35,C36,C37,C38,C43,C44,C45,C46,C47,C48,C5,C51,C52,C53,C54,C55,C56,C57,C58,C6,C60,C62,C63,C65,C66,C67,C68,C69,C73,C75,C77,C79,C8,C80,C81,C82,C84,C85,C87,C9,D11,D2,D3,D4,D5,D6
typical_cds_rare	Chr3	63679249	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	2	B133,B56
typical_cds_rare	Chr3	63679255	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	2	B12,B77
typical_cds_rare	Chr3	63679267	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	3	B38,B39,C38
lof_cds	Chr3	63679269	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	60	A11,A14,A21,A22,A24,A5,A7,B106,B119,B124,B129,B134,B17,B20,B21,B30,B31,B40,B47,B50,B53,B59,B6,B61,B62,B64,B66,B70,B76,B8,B80,B81,B86,B87,B9,B91,B95,C1,C17,C24,C33,C37,C4,C46,C5,C54,C57,C59,C60,C63,C64,C65,C66,C67,C80,C87,D1,D3,D4,D9
lof_cds	Chr3	63679271	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	60	A11,A14,A21,A22,A24,A5,A7,B106,B119,B124,B129,B17,B20,B21,B30,B31,B40,B47,B50,B53,B59,B6,B61,B62,B64,B66,B70,B76,B8,B80,B81,B86,B87,B9,B91,B95,C1,C17,C24,C33,C37,C4,C46,C5,C54,C57,C59,C60,C63,C64,C65,C66,C67,C71,C80,C87,D1,D3,D4,D9
typical_cds_rare	Chr3	63680234	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	1	B136
lof_cds	Chr3	63680321	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	4	A6,B4,C21,C57
typical_cds_rare	Chr3	63680321	C	CAA	INDEL	2bp_insertion	CDS_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	4	A6,B4,C21,C57
lof_cds	Chr3	63680322	CGG	C	INDEL	2bp_deletion	frameshift_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	3	A6,C21,C57
typical_cds_rare	Chr3	63680322	CGG	C	INDEL	2bp_deletion	CDS_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	3	A6,C21,C57
lof_cds	Chr3	63680374	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	39	A1,A2,B105,B118,B120,B125,B24,B32,B36,B37,B40,B47,B48,B49,B58,B60,B66,B72,B77,B85,B89,B95,B99,C13,C23,C25,C26,C40,C42,C44,C7,C70,C80,C81,C83,C84,D1,D10,D11
lof_cds	Chr3	63680376	C	CT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	39	A1,A2,B105,B118,B12,B125,B24,B32,B36,B37,B40,B47,B48,B49,B58,B60,B66,B72,B77,B85,B89,B95,B99,C13,C23,C25,C26,C40,C42,C44,C7,C70,C80,C81,C83,C84,D1,D10,D11
typical_cds_rare	Chr3	63680407	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	3	B76,C86,D11
typical_cds_rare	Chr3	63680425	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	2	B11,B53
typical_cds_rare	Chr3	63680451	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015380	SmilChr03G004581	131015380	rna-XM_057943760.1	2	B11,B53