source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	64040100	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	93	A10,A11,A13,A14,A16,A2,A25,A8,B100,B101,B106,B108,B109,B113,B12,B121,B129,B130,B133,B15,B18,B21,B22,B26,B27,B28,B29,B3,B30,B33,B45,B47,B48,B49,B50,B59,B61,B62,B65,B67,B70,B73,B74,B75,B79,B80,B83,B85,B87,B93,B98,C1,C13,C15,C17,C19,C23,C29,C3,C33,C35,C36,C39,C4,C41,C43,C47,C48,C5,C50,C51,C56,C57,C59,C6,C62,C63,C67,C7,C75,C76,C77,C78,C8,C81,C82,C83,C85,D10,D11,D2,D7,D9
typical_cds_rare	Chr3	64040188	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	4	B19,B45,C42,C72
typical_cds_rare	Chr3	64040203	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	1	B104
typical_cds_rare	Chr3	64040233	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	4	B133,B15,C5,C7
lof_cds	Chr3	64040239	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	159	A1,A11,A13,A14,A15,A16,A19,A2,A22,A23,A24,A25,A5,A6,A7,A8,B1,B100,B101,B103,B105,B106,B107,B109,B11,B110,B114,B12,B122,B124,B125,B127,B129,B13,B130,B132,B133,B136,B138,B15,B18,B19,B2,B20,B21,B22,B23,B24,B27,B28,B29,B3,B32,B33,B34,B37,B40,B41,B42,B43,B45,B47,B49,B50,B52,B54,B55,B56,B57,B59,B6,B61,B62,B63,B64,B65,B67,B69,B70,B73,B74,B75,B76,B78,B79,B8,B81,B82,B83,B85,B87,B89,B9,B93,B94,B96,B98,B99,C1,C10,C11,C13,C14,C15,C17,C18,C19,C2,C21,C23,C27,C29,C3,C30,C31,C34,C35,C36,C39,C4,C40,C41,C43,C45,C47,C48,C49,C50,C51,C52,C53,C56,C57,C59,C6,C61,C62,C63,C65,C67,C69,C72,C76,C77,C78,C8,C81,C82,C83,C84,C85,C86,C87,D10,D11,D2,D5,D7,D9
lof_cds	Chr3	64040243	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	156	A1,A11,A13,A14,A15,A16,A19,A2,A22,A23,A24,A25,A5,A6,A7,A8,B1,B100,B101,B103,B105,B106,B107,B109,B11,B110,B114,B12,B122,B124,B125,B127,B129,B13,B130,B132,B133,B136,B138,B15,B18,B19,B2,B20,B21,B22,B23,B24,B27,B28,B29,B3,B32,B33,B37,B40,B41,B42,B43,B45,B47,B49,B50,B52,B54,B55,B56,B57,B59,B6,B61,B62,B63,B64,B65,B67,B69,B70,B73,B74,B75,B76,B78,B79,B8,B81,B82,B83,B85,B87,B89,B9,B93,B94,B96,B98,B99,C1,C11,C13,C14,C15,C17,C18,C19,C2,C21,C23,C27,C29,C3,C30,C31,C34,C35,C36,C39,C4,C40,C41,C43,C45,C47,C48,C49,C50,C51,C52,C53,C56,C57,C59,C6,C61,C62,C63,C65,C67,C69,C72,C76,C77,C78,C8,C81,C82,C83,C84,C85,C86,C87,D10,D11,D2,D5,D9
typical_cds_rare	Chr3	64040258	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	3	B131,C9,D5
typical_cds_rare	Chr3	64040301	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	1	D10
typical_cds_rare	Chr3	64040308	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	4	A2,B56,B84,B96
lof_cds	Chr3	64040310	GTT	G	INDEL	2bp_deletion	frameshift_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	68	A15,A16,A19,A2,A7,B100,B101,B105,B114,B129,B130,B132,B18,B21,B22,B28,B29,B3,B32,B33,B47,B49,B50,B55,B59,B6,B62,B64,B65,B67,B70,B73,B75,B79,B83,B85,B87,B94,B96,B99,C1,C13,C17,C19,C23,C3,C34,C35,C36,C39,C4,C41,C45,C47,C50,C51,C52,C59,C6,C61,C67,C72,C78,C81,C83,C87,D2,D5
typical_cds_rare	Chr3	64040350	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	1	B77
lof_cds	Chr3	64040358	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	1	B130
typical_cds_rare	Chr3	64040358	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	1	B130
lof_cds	Chr3	64040374	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	1	B130
typical_cds_rare	Chr3	64040374	C	CG	INDEL	1bp_insertion	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	1	B130
lof_cds	Chr3	64041268	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	14	B130,B137,B34,B49,B79,B9,B90,B91,B92,C2,C21,C36,C60,D1
lof_cds	Chr3	64041273	C	CGG	INDEL	2bp_insertion	frameshift_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	10	A7,B1,B106,B114,B54,C39,C52,C61,C63,D5
typical_cds_rare	Chr3	64041278	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	2	C40,D11
typical_cds_rare	Chr3	64041331	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	4	B12,B18,B44,B55
typical_cds_rare	Chr3	64041344	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	1	B44
typical_cds_rare	Chr3	64041346	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	1	B122
typical_cds_rare	Chr3	64041376	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	2	B18,B68
typical_cds_rare	Chr3	64041410	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	1	B107
typical_cds_rare	Chr3	64041412	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	5	A16,B47,C17,C49,C62
typical_cds_rare	Chr3	64041421	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	5	A16,B98,C17,C23,C49
typical_cds_rare	Chr3	64041427	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	2	B140,C20
typical_cds_rare	Chr3	64041434	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	1	B93
typical_cds_rare	Chr3	64041443	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	1	B18
typical_cds_rare	Chr3	64041517	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	5	B105,B12,B122,B55,B99
typical_cds_rare	Chr3	64041524	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	1	A16
typical_cds_rare	Chr3	64041555	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	2	B112,C85
typical_cds_rare	Chr3	64041558	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	1	C40
typical_cds_rare	Chr3	64041618	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	3	B105,B122,B55
lof_cds	Chr3	64041652	A	AGC	INDEL	2bp_insertion	frameshift_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	9	A6,B11,B127,B41,B47,B98,C49,C76,C86
typical_cds_rare	Chr3	64041669	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	1	A16
lof_cds	Chr3	64041701	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	1	C48
typical_cds_rare	Chr3	64041701	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	1	C48
typical_cds_rare	Chr3	64041708	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	1	B107
typical_cds_rare	Chr3	64041746	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	5	B105,B122,B55,B74,B99
lof_cds	Chr3	64041749	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	1	B85
typical_cds_rare	Chr3	64041749	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	1	B85
typical_cds_rare	Chr3	64041757	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	4	B106,B45,B85,C85
typical_cds_rare	Chr3	64041830	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	2	B35,B68
typical_cds_rare	Chr3	64041843	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	2	B35,B68
typical_cds_rare	Chr3	64041849	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	5	A2,B121,B56,B84,B96
typical_cds_rare	Chr3	64041850	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015482	SmilChr03G004650	131015482	rna-XM_057943907.1	2	B27,B50