source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr4	1693783	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	1	B54
typical_cds_rare	Chr4	1693783	TTC	T	INDEL	2bp_deletion	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	1	B54
lof_cds	Chr4	1693823	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	186	A1,A10,A14,A16,A18,A19,A2,A22,A24,A4,A5,A6,A7,A8,A9,B10,B100,B101,B102,B103,B104,B105,B106,B108,B109,B11,B111,B112,B113,B114,B115,B117,B118,B119,B12,B121,B122,B123,B125,B126,B128,B13,B130,B131,B132,B133,B134,B135,B136,B14,B140,B15,B16,B17,B21,B22,B26,B27,B30,B32,B33,B34,B35,B37,B38,B39,B4,B46,B47,B48,B49,B50,B53,B54,B55,B56,B57,B58,B6,B60,B62,B63,B64,B65,B66,B67,B68,B69,B70,B72,B73,B74,B75,B77,B78,B79,B80,B81,B82,B84,B86,B87,B88,B89,B9,B90,B91,B92,B93,B96,B97,B98,B99,C1,C11,C12,C15,C17,C18,C19,C2,C20,C21,C22,C23,C24,C26,C27,C29,C3,C31,C32,C34,C35,C36,C37,C38,C39,C40,C41,C42,C43,C44,C45,C46,C48,C49,C5,C50,C51,C52,C53,C54,C55,C57,C58,C6,C60,C63,C64,C65,C66,C68,C69,C7,C71,C73,C74,C76,C78,C79,C80,C81,C82,C84,C85,C87,C9,D1,D10,D11,D2,D3,D5,D6,D9
lof_cds	Chr4	1693826	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	186	A1,A10,A14,A16,A18,A19,A2,A22,A24,A4,A5,A6,A7,A8,A9,B10,B100,B101,B102,B103,B104,B105,B106,B108,B109,B11,B111,B112,B113,B114,B115,B117,B118,B119,B12,B121,B122,B123,B125,B126,B128,B13,B130,B131,B132,B133,B134,B135,B136,B14,B140,B15,B16,B17,B21,B22,B26,B27,B30,B32,B33,B34,B35,B37,B38,B39,B4,B46,B47,B48,B49,B50,B53,B54,B55,B56,B57,B58,B6,B60,B62,B63,B64,B65,B66,B67,B68,B69,B70,B72,B73,B74,B75,B77,B78,B79,B80,B81,B82,B84,B86,B87,B88,B89,B9,B90,B91,B92,B93,B96,B97,B98,B99,C1,C11,C12,C15,C17,C18,C19,C2,C20,C21,C22,C23,C24,C26,C27,C29,C3,C31,C32,C34,C35,C36,C37,C38,C39,C40,C41,C42,C43,C44,C45,C46,C48,C49,C5,C50,C51,C52,C53,C54,C55,C57,C58,C6,C60,C63,C64,C65,C66,C68,C69,C7,C71,C73,C74,C76,C78,C79,C80,C81,C82,C84,C85,C87,C9,D1,D10,D11,D2,D3,D5,D6,D9
lof_cds	Chr4	1693843	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	1	B59
typical_cds_rare	Chr4	1693843	CTT	C	INDEL	2bp_deletion	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	1	B59
typical_cds_rare	Chr4	1694003	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	2	B122,C8
lof_cds	Chr4	1694004	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	2	B131,C50
typical_cds_rare	Chr4	1694004	CG	C	INDEL	1bp_deletion	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	2	B131,C50
typical_cds_rare	Chr4	1694006	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	4	A16,B102,B29,D11
typical_cds_rare	Chr4	1694016	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	3	A14,B131,C50
lof_cds	Chr4	1694020	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	20	A13,A24,B102,B11,B112,B12,B135,B17,B37,B44,B63,B94,B98,C2,C23,C30,C33,C48,C61,C80
typical_cds_rare	Chr4	1694084	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	4	B43,B7,C20,C50
typical_cds_rare	Chr4	1694090	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	2	B74,C14
typical_cds_rare	Chr4	1694127	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	5	B40,B43,B7,C20,C50
typical_cds_rare	Chr4	1694162	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	3	A5,B40,C20
typical_cds_rare	Chr4	1694185	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	1	B120
lof_cds	Chr4	1694243	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	87	A10,A18,A19,A2,A22,B100,B101,B105,B106,B111,B112,B113,B114,B117,B118,B122,B123,B126,B130,B131,B134,B138,B140,B15,B16,B17,B20,B21,B25,B26,B29,B32,B34,B38,B40,B49,B50,B54,B55,B58,B59,B6,B62,B63,B64,B67,B68,B69,B70,B78,B79,B80,B81,B9,B90,B92,B96,C11,C15,C18,C25,C27,C29,C3,C35,C38,C39,C43,C46,C49,C5,C50,C53,C55,C57,C58,C60,C66,C73,C79,C82,C87,C9,D1,D10,D3,D4
lof_cds	Chr4	1694275	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	30	A9,B105,B111,B125,B136,B139,B24,B25,B29,B52,B56,B62,B73,B75,B80,B82,B84,B87,B93,B97,C13,C4,C40,C5,C53,C62,C72,C73,C75,D10
typical_cds_rare	Chr4	1694332	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	1	B79
typical_cds_rare	Chr4	1694368	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	3	A9,B121,C34
typical_cds_rare	Chr4	1694386	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	1	D4
lof_cds	Chr4	1694403	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	1	B60
typical_cds_rare	Chr4	1694403	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	1	B60
lof_cds	Chr4	1694405	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	41	A16,A7,A8,A9,B101,B103,B104,B109,B121,B128,B131,B15,B21,B32,B33,B46,B49,B54,B55,B77,B78,B81,B83,B90,B99,C2,C23,C26,C28,C29,C34,C38,C41,C45,C46,C48,C51,C52,C53,C85,D3
lof_cds	Chr4	1694407	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	41	A16,A7,A8,A9,B101,B103,B104,B109,B121,B128,B131,B15,B21,B32,B33,B46,B49,B54,B55,B77,B78,B81,B83,B90,B99,C2,C23,C26,C28,C29,C34,C38,C41,C45,C46,C48,C51,C52,C53,C85,D3
typical_cds_rare	Chr4	1694419	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	2	B71,C53
typical_cds_rare	Chr4	1694441	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	1	D4
lof_cds	Chr4	1694564	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	36	A16,A19,B11,B113,B114,B122,B13,B134,B17,B59,B60,B64,B70,B71,B75,B83,B92,B98,B99,C2,C26,C28,C33,C34,C41,C45,C5,C51,C55,C57,C58,C60,C66,C68,C80,D10
typical_cds_rare	Chr4	1694735	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	4	B111,B50,C29,C73
typical_cds_rare	Chr4	1694759	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	4	A10,B78,C4,C64
lof_cds	Chr4	1694763	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	4	A2,B117,C74,C84
typical_cds_rare	Chr4	1694763	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	4	A2,B117,C74,C84
lof_cds	Chr4	1694765	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	10	A1,B103,B32,B57,B77,B99,C36,C41,C46,C75
lof_cds	Chr4	1694769	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	5	A2,B117,C14,C74,C84
typical_cds_rare	Chr4	1694769	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	5	A2,B117,C14,C74,C84
lof_cds	Chr4	1694775	GGT	G	INDEL	2bp_deletion	frameshift_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1,rna-XM_057951527.1	1	B54
typical_cds_rare	Chr4	1694775	GGT	G	INDEL	2bp_deletion	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951526.1	1	B54
lof_cds	Chr4	1694796	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	54	A18,A7,B102,B11,B113,B117,B119,B120,B121,B13,B131,B15,B20,B27,B29,B30,B49,B56,B6,B60,B64,B67,B68,B69,B75,B78,B9,B90,B92,B96,B98,C11,C12,C15,C21,C22,C24,C26,C36,C38,C42,C45,C51,C54,C60,C63,C65,C69,C7,C71,C79,C81,C9,D5
lof_cds	Chr4	1694838	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	1	A5
typical_cds_rare	Chr4	1694838	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	1	A5
typical_cds_rare	Chr4	1694839	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	2	B108,C74
lof_cds	Chr4	1694884	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	1	A5
typical_cds_rare	Chr4	1694884	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	1	A5
lof_cds	Chr4	1694904	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	6	A22,B12,B2,B55,C34,C67
typical_cds_rare	Chr4	1694952	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	1	D6
typical_cds_rare	Chr4	1695013	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	3	B140,C29,C73
typical_cds_rare	Chr4	1695044	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	1	C73
typical_cds_rare	Chr4	1695069	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	1	B20
lof_cds	Chr4	1695080	A	AGT	INDEL	2bp_insertion	frameshift_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	1	B20
typical_cds_rare	Chr4	1695080	A	AGT	INDEL	2bp_insertion	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	1	B20
lof_cds	Chr4	1695081	ACT	A	INDEL	2bp_deletion	frameshift_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	1	B20
typical_cds_rare	Chr4	1695081	ACT	A	INDEL	2bp_deletion	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	1	B20
typical_cds_rare	Chr4	1695092	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	3	C77,C79,D2
typical_cds_rare	Chr4	1695104	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	2	B128,B79
typical_cds_rare	Chr4	1695108	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	4	B20,C79,D2,D8
typical_cds_rare	Chr4	1695109	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	4	B20,C79,D2,D8
typical_cds_rare	Chr4	1695116	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	5	B128,B20,C79,D2,D8
typical_cds_rare	Chr4	1695130	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	1	B129
lof_cds	Chr4	1695138	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	1	B129
typical_cds_rare	Chr4	1695138	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	1	B129
typical_cds_rare	Chr4	1695143	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	1	C44
typical_cds_rare	Chr4	1695167	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	2	B71,C75
typical_cds_rare	Chr4	1695175	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	1	B53
typical_cds_rare	Chr4	1695177	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	4	A1,B10,B60,D9
typical_cds_rare	Chr4	1695182	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	2	B10,B60
typical_cds_rare	Chr4	1695187	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022121	SmilChr04G000190	131022121	rna-XM_057951527.1	2	B98,C2