source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr4	2515543	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	3	B131,B9,C26
typical_cds_rare	Chr4	2515587	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	3	B131,B9,C26
lof_cds	Chr4	2515610	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	51	A1,A4,A7,A9,B119,B124,B127,B134,B15,B19,B20,B22,B31,B36,B37,B42,B43,B45,B53,B60,B66,B73,B76,B78,B79,B82,B91,C15,C17,C19,C2,C21,C27,C28,C30,C31,C33,C35,C41,C45,C46,C60,C65,C74,C78,C85,C86,C9,D1,D2,D9
typical_cds_rare	Chr4	2515875	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	1	A22
lof_cds	Chr4	2515878	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	62	A2,A20,A21,A3,A7,B100,B103,B104,B108,B109,B111,B118,B123,B124,B128,B129,B131,B137,B140,B15,B2,B20,B23,B25,B36,B39,B43,B59,B6,B71,B72,B76,B8,B82,B84,B85,B88,B90,B92,B94,C12,C14,C15,C21,C25,C26,C27,C28,C40,C41,C44,C45,C52,C62,C63,C7,C81,C84,C87,D10,D2,D3
lof_cds	Chr4	2515884	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	65	A2,A20,A21,A3,A7,B100,B103,B104,B107,B108,B109,B111,B118,B123,B124,B128,B129,B131,B137,B140,B15,B2,B20,B23,B25,B36,B39,B43,B44,B59,B6,B61,B71,B72,B76,B8,B82,B84,B85,B88,B90,B92,B94,C12,C14,C15,C21,C25,C26,C27,C28,C40,C41,C44,C45,C52,C62,C63,C7,C81,C84,C87,D10,D2,D3
lof_cds	Chr4	2515885	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	66	A2,A20,A21,A3,A7,B100,B103,B104,B107,B108,B109,B111,B118,B123,B124,B128,B129,B131,B137,B140,B15,B2,B20,B23,B25,B36,B39,B43,B44,B59,B6,B61,B71,B72,B76,B8,B82,B84,B85,B88,B90,B92,B94,C12,C14,C15,C21,C25,C26,C27,C28,C40,C41,C44,C45,C52,C62,C63,C7,C81,C84,C87,D10,D11,D2,D3
typical_cds_rare	Chr4	2515906	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	1	C28
typical_cds_rare	Chr4	2515925	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	4	B127,B128,C1,C79
lof_cds	Chr4	2515928	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	14	A2,A3,B107,B108,B112,B118,B124,B20,B33,B71,C21,C45,C52,D10
typical_cds_rare	Chr4	2515983	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	1	B108
typical_cds_rare	Chr4	2516007	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	1	B88
lof_cds	Chr4	2516027	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	17	A19,A7,B112,B20,B23,B24,B51,B72,B89,C15,C34,C40,C52,C62,C63,C67,D4
lof_cds	Chr4	2516030	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	1	B104
typical_cds_rare	Chr4	2516030	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	1	B104
lof_cds	Chr4	2516034	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	6	A3,B101,B104,B71,C45,C56
typical_cds_rare	Chr4	2516045	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	2	B9,C26
typical_cds_rare	Chr4	2516065	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	5	B128,C1,C54,C79,C9
lof_cds	Chr4	2516070	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	60	A13,A16,A21,A23,A7,B102,B105,B11,B111,B113,B121,B123,B127,B130,B133,B14,B23,B27,B31,B38,B39,B4,B44,B45,B49,B5,B53,B6,B62,B66,B69,B71,B85,B88,B89,B93,B95,B96,B97,C1,C11,C14,C2,C24,C27,C29,C33,C42,C44,C49,C51,C62,C67,C73,C77,C80,C83,C84,C85,D8
lof_cds	Chr4	2516127	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	1	C24
typical_cds_rare	Chr4	2516127	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	1	C24
typical_cds_rare	Chr4	2516142	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	1	C24
lof_cds	Chr4	2516147	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	58	A1,A13,A15,A16,A19,A2,A21,A3,A4,A7,B101,B104,B106,B112,B117,B118,B128,B138,B17,B2,B20,B22,B24,B25,B28,B29,B4,B46,B54,B66,B71,B73,B76,B79,B84,B92,B93,C1,C11,C12,C16,C2,C21,C29,C32,C4,C40,C51,C52,C54,C61,C62,C79,C80,C81,C86,C9,D3
typical_cds_rare	Chr4	2516156	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	1	B101
typical_cds_rare	Chr4	2516298	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	1	B44
typical_cds_rare	Chr4	2516340	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	4	A16,B138,B2,C28
lof_cds	Chr4	2516421	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	35	A18,A7,B104,B109,B11,B115,B132,B138,B139,B14,B16,B19,B20,B32,B41,B45,B63,B73,B75,B79,B83,B93,B99,C1,C11,C16,C3,C34,C4,C41,C46,C51,C69,C82,D10
typical_cds_rare	Chr4	2516615	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	3	B44,C24,C3
typical_cds_rare	Chr4	2516663	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	3	B44,C24,C3
lof_cds	Chr4	2516789	G	GTT	INDEL	2bp_insertion	frameshift_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	3	B44,C24,C3
typical_cds_rare	Chr4	2516789	G	GTT	INDEL	2bp_insertion	CDS_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	3	B44,C24,C3
lof_cds	Chr4	2516884	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	17	A1,B119,B124,B134,B20,B22,B36,B42,B43,B66,B73,B79,C15,C17,C2,C60,C86
typical_cds_rare	Chr4	2516890	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	2	B44,C3
typical_cds_rare	Chr4	2516980	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	1	B44
lof_cds	Chr4	2517180	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	18	A1,B119,B124,B134,B20,B22,B31,B36,B42,B43,B66,B73,B79,C15,C17,C2,C60,C86
typical_cds_rare	Chr4	2517215	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021129	SmilChr04G000272	131021129	rna-XM_057950218.1	2	B123,B131
