source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr4	2777325	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	3	C24,C47,C8
lof_cds	Chr4	2777361	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	B14
typical_cds_rare	Chr4	2777361	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	B14
lof_cds	Chr4	2777363	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	C63
typical_cds_rare	Chr4	2777363	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	C63
typical_cds_rare	Chr4	2777364	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	D11
typical_cds_rare	Chr4	2777403	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	4	A3,B113,C20,C63
lof_cds	Chr4	2777450	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	8	A7,B113,B119,B54,B75,B92,C7,C78
typical_cds_rare	Chr4	2777529	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	5	B101,B53,B66,C56,C79
typical_cds_rare	Chr4	2777562	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	5	B126,B23,C12,C27,C8
typical_cds_rare	Chr4	2777580	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	3	B66,B68,C79
typical_cds_rare	Chr4	2777604	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	C35,C46
typical_cds_rare	Chr4	2777607	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	A3,B55
typical_cds_rare	Chr4	2777622	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	B45,C58
typical_cds_rare	Chr4	2777623	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	A3,B55
typical_cds_rare	Chr4	2777644	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	B76,C25
typical_cds_rare	Chr4	2777650	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	B76,C25
typical_cds_rare	Chr4	2777656	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	B119
typical_cds_rare	Chr4	2777674	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	3	B52,B55,B9
lof_cds	Chr4	2777684	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	3	B45,B76,C25
typical_cds_rare	Chr4	2777684	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	3	B45,B76,C25
lof_cds	Chr4	2777688	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	4	B108,B2,B23,C21
typical_cds_rare	Chr4	2777688	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	4	B108,B2,B23,C21
lof_cds	Chr4	2777714	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	13	B110,B129,B130,B34,B40,B87,C16,C55,C62,C74,C78,D3,D9
typical_cds_rare	Chr4	2777724	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	4	A13,A25,A9,B121
typical_cds_rare	Chr4	2777727	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	C77,D11
typical_cds_rare	Chr4	2777744	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	B97,C19
typical_cds_rare	Chr4	2777752	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	B30,C50
lof_cds	Chr4	2777860	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	49	A10,A15,A20,A4,A5,A8,B1,B102,B106,B123,B124,B127,B135,B136,B139,B14,B29,B3,B33,B36,B40,B41,B44,B48,B5,B58,B70,B73,B81,B99,C1,C13,C16,C24,C29,C30,C33,C35,C39,C48,C50,C55,C6,C60,C64,C66,C76,C84,D5
typical_cds_rare	Chr4	2777870	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	B56,C57
typical_cds_rare	Chr4	2777880	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	A8,C70
typical_cds_rare	Chr4	2777884	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	4	B30,B77,C29,C49
typical_cds_rare	Chr4	2777897	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	B16,B75
typical_cds_rare	Chr4	2777903	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	B24,C39
typical_cds_rare	Chr4	2777904	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	B109
typical_cds_rare	Chr4	2777914	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	C29,C49
typical_cds_rare	Chr4	2777945	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	3	A3,B33,C68
typical_cds_rare	Chr4	2777952	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	B109
typical_cds_rare	Chr4	2777998	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	D10
lof_cds	Chr4	2778000	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	B10,C9
typical_cds_rare	Chr4	2778000	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	B10,C9
lof_cds	Chr4	2778004	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	B10,C9
typical_cds_rare	Chr4	2778004	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	B10,C9
typical_cds_rare	Chr4	2778015	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	D10
typical_cds_rare	Chr4	2778083	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	4	B6,B62,C14,C8
typical_cds_rare	Chr4	2778086	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	B12
typical_cds_rare	Chr4	2778096	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	4	B76,B8,B97,C57
typical_cds_rare	Chr4	2778102	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	5	A21,A3,B117,B12,C3
typical_cds_rare	Chr4	2778106	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	3	B35,B45,B70
typical_cds_rare	Chr4	2778131	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	3	B35,B45,B70
typical_cds_rare	Chr4	2778142	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	C48,C5
lof_cds	Chr4	2778148	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	3	B32,B37,C86
typical_cds_rare	Chr4	2778148	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	3	B32,B37,C86
typical_cds_rare	Chr4	2778154	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	D3
typical_cds_rare	Chr4	2778156	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	C48,C5
lof_cds	Chr4	2778204	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	D10
typical_cds_rare	Chr4	2778204	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	D10
typical_cds_rare	Chr4	2778223	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	B64,C46
lof_cds	Chr4	2778225	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	4	A4,B28,B64,C24
typical_cds_rare	Chr4	2778225	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	4	A4,B28,B64,C24
lof_cds	Chr4	2778261	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	4	A4,B28,B64,C24
typical_cds_rare	Chr4	2778261	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	4	A4,B28,B64,C24
lof_cds	Chr4	2778317	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	46	A24,A3,B10,B100,B102,B105,B106,B12,B120,B123,B127,B130,B133,B16,B17,B19,B25,B29,B30,B50,B58,B67,B72,B81,B87,B9,B95,B99,C13,C33,C34,C39,C42,C47,C53,C55,C65,C70,C71,C73,C74,C84,C87,D1,D3,D4
lof_cds	Chr4	2778319	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	200	A1,A11,A14,A16,A18,A19,A2,A21,A22,A23,A24,A25,A3,A4,A5,A7,A9,B10,B100,B102,B105,B106,B107,B109,B11,B112,B113,B115,B117,B118,B119,B12,B120,B121,B122,B126,B128,B129,B13,B130,B131,B132,B133,B134,B135,B137,B138,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B26,B27,B28,B29,B30,B31,B32,B33,B34,B36,B37,B4,B42,B43,B45,B46,B47,B49,B5,B51,B52,B53,B54,B55,B57,B58,B59,B6,B60,B62,B63,B64,B67,B68,B69,B7,B72,B73,B74,B75,B76,B77,B78,B79,B8,B81,B83,B84,B85,B86,B87,B88,B9,B90,B91,B92,B93,B94,B95,B97,B98,B99,C10,C11,C14,C15,C17,C18,C19,C2,C22,C23,C24,C26,C27,C28,C3,C30,C31,C32,C34,C35,C36,C37,C38,C39,C4,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C59,C6,C61,C62,C63,C64,C65,C66,C68,C69,C7,C70,C71,C72,C73,C74,C77,C78,C79,C8,C81,C83,C85,C86,C87,C9,D1,D10,D11,D2,D3,D6,D7,D8,D9
lof_cds	Chr4	2778320	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	7	A21,B110,B117,B12,B132,B55,C3
typical_cds_rare	Chr4	2778351	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	C21
lof_cds	Chr4	2778404	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	15	A25,A9,B113,B114,B25,B34,B95,C15,C20,C25,C26,C34,C63,D10,D4
lof_cds	Chr4	2778430	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	20	A1,A11,B117,B119,B130,B131,B30,B37,B75,B78,B9,B90,C22,C41,C63,C65,C69,C75,C78,D5
typical_cds_rare	Chr4	2778458	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	3	B12,B55,C3
lof_cds	Chr4	2778468	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	C29
typical_cds_rare	Chr4	2778468	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	C29
typical_cds_rare	Chr4	2778473	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	4	A15,B113,B13,C23
typical_cds_rare	Chr4	2778501	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	B16,B75
lof_cds	Chr4	2778542	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	6	A25,B114,C20,C26,C63,D4
typical_cds_rare	Chr4	2778554	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	4	B128,C58,C8,D7
lof_cds	Chr4	2778558	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	22	A5,B124,B17,B21,B38,B39,B59,B66,B81,B82,B89,B99,C1,C27,C35,C52,C55,C58,C76,C87,D5,D8
typical_cds_rare	Chr4	2778576	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	A9
typical_cds_rare	Chr4	2778593	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	D10
typical_cds_rare	Chr4	2778600	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	D10
lof_cds	Chr4	2778607	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	107	A1,A11,A14,A15,A16,A20,A23,A24,A25,A5,A6,A8,B103,B104,B111,B113,B115,B117,B118,B119,B12,B120,B121,B123,B126,B13,B131,B132,B133,B134,B137,B138,B14,B140,B18,B2,B21,B26,B30,B35,B37,B38,B42,B43,B45,B46,B47,B48,B50,B51,B52,B55,B56,B59,B65,B69,B74,B75,B77,B78,B79,B83,B87,B9,B90,B92,B95,B96,B98,C1,C10,C12,C18,C19,C22,C27,C28,C29,C31,C37,C41,C43,C44,C49,C51,C54,C56,C57,C59,C6,C67,C69,C7,C70,C72,C73,C75,C76,C78,C81,C86,D10,D4,D5,D6,D7,D9
lof_cds	Chr4	2778608	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	4	A20,B137,B33,C36
typical_cds_rare	Chr4	2778608	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	4	A20,B137,B33,C36
typical_cds_rare	Chr4	2778610	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	D6
lof_cds	Chr4	2778612	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	3	B3,B54,C21
typical_cds_rare	Chr4	2778612	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	3	B3,B54,C21
typical_cds_rare	Chr4	2778615	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	B16,B75
typical_cds_rare	Chr4	2778630	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	D9
lof_cds	Chr4	2778640	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	10	A13,A25,A7,B114,B24,B34,B45,B76,C34,C63
typical_cds_rare	Chr4	2778644	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	5	A14,B100,C12,C29,C47
typical_cds_rare	Chr4	2778654	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	2	A9,D1
typical_cds_rare	Chr4	2778660	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	1	D11
lof_cds	Chr4	2778661	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	8	A20,B115,B22,B30,B77,C29,C45,C6
lof_cds	Chr4	2778662	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131021136	SmilChr04G000299	131021136	rna-XM_057950225.1	169	A1,A10,A11,A14,A15,A18,A2,A20,A22,A23,A24,A25,A3,A4,A5,A7,A8,B1,B100,B101,B103,B104,B108,B110,B111,B113,B117,B118,B119,B12,B123,B124,B126,B129,B13,B130,B131,B132,B133,B134,B136,B137,B138,B14,B140,B15,B16,B17,B18,B2,B20,B21,B24,B25,B26,B28,B29,B30,B34,B35,B37,B38,B39,B40,B41,B42,B45,B46,B49,B5,B51,B52,B54,B56,B59,B62,B64,B65,B66,B68,B69,B7,B71,B74,B75,B77,B78,B8,B81,B82,B83,B84,B86,B87,B88,B9,B90,B92,B93,B94,B95,B96,B97,B99,C10,C12,C16,C18,C19,C2,C20,C22,C23,C24,C27,C28,C3,C31,C33,C35,C36,C37,C39,C41,C42,C43,C44,C45,C46,C47,C48,C51,C52,C54,C55,C56,C57,C58,C59,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C72,C73,C74,C75,C76,C77,C78,C80,C81,C83,C84,C86,C87,C9,D3,D4,D5,D8,D9