source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr4	9256804	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	1	B41
lof_cds	Chr4	9256820	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	51	A10,A24,A5,A7,B101,B114,B131,B136,B14,B15,B21,B22,B26,B29,B34,B35,B36,B37,B47,B48,B49,B56,B60,B61,B68,B72,B74,B83,B85,B88,B89,B90,B92,B93,C10,C23,C29,C38,C40,C42,C5,C56,C57,C7,C70,C71,C73,C8,C80,C81,C86
lof_cds	Chr4	9256889	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	1	B108
typical_cds_rare	Chr4	9256889	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	1	B108
typical_cds_rare	Chr4	9257800	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	1	B41
lof_cds	Chr4	9257841	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	3	A20,C19,C54
typical_cds_rare	Chr4	9257841	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	3	A20,C19,C54
typical_cds_rare	Chr4	9257870	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	3	B16,D7,D8
typical_cds_rare	Chr4	9257907	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	4	C11,C2,C69,C84
lof_cds	Chr4	9258043	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	37	A10,A24,A5,B101,B131,B136,B14,B15,B22,B26,B29,B34,B37,B47,B56,B60,B68,B74,B83,B85,B88,B89,B93,B96,C10,C23,C38,C42,C56,C57,C7,C70,C73,C8,C80,C81,C86
lof_cds	Chr4	9258069	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	7	A21,B22,B41,B75,B96,C63,C8
lof_cds	Chr4	9258110	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	7	A21,B22,B41,B75,B96,C63,C8
typical_cds_rare	Chr4	9258331	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	1	B44
lof_cds	Chr4	9258373	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	106	A16,A18,A20,A21,A23,A24,A25,A7,A8,B104,B105,B106,B107,B112,B113,B115,B117,B119,B120,B123,B125,B126,B129,B13,B139,B14,B140,B17,B2,B20,B21,B22,B23,B28,B41,B44,B51,B52,B53,B54,B57,B59,B62,B63,B64,B65,B66,B68,B71,B75,B76,B79,B83,B84,B89,B90,B91,B92,B94,B95,B97,B99,C1,C11,C14,C15,C16,C19,C24,C26,C28,C32,C43,C44,C46,C48,C49,C51,C52,C53,C54,C56,C57,C59,C6,C60,C61,C62,C64,C66,C68,C69,C70,C76,C77,C79,C83,C84,C85,C86,C87,C9,D10,D11,D2,D4
lof_cds	Chr4	9258379	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	106	A16,A18,A20,A21,A23,A24,A25,A7,A8,B104,B105,B106,B107,B112,B113,B115,B117,B119,B120,B123,B125,B126,B129,B13,B139,B14,B140,B17,B2,B20,B21,B22,B23,B28,B41,B44,B51,B52,B53,B54,B57,B59,B62,B63,B64,B65,B66,B68,B71,B75,B76,B79,B83,B84,B89,B90,B91,B92,B94,B95,B97,B99,C1,C11,C14,C15,C16,C19,C24,C26,C28,C32,C43,C44,C46,C48,C49,C51,C52,C53,C54,C56,C57,C59,C6,C60,C61,C62,C64,C66,C68,C69,C70,C76,C77,C79,C83,C84,C85,C86,C87,C9,D10,D11,D2,D4
typical_cds_rare	Chr4	9258426	AC	*	INDEL	1bp_deletion	CDS_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	1	A14
typical_cds_rare	Chr4	9258543	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	2	B90,C64
typical_cds_rare	Chr4	9258554	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	5	B122,B27,B31,B99,C57
lof_cds	Chr4	9258641	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	82	A13,A15,A18,A21,A22,A3,B1,B10,B102,B107,B11,B110,B111,B114,B115,B12,B120,B121,B122,B127,B129,B130,B133,B134,B137,B17,B24,B25,B26,B28,B29,B30,B32,B33,B4,B40,B45,B50,B53,B56,B58,B59,B6,B61,B63,B69,B78,B80,B81,B86,B87,B96,B98,B99,C12,C13,C14,C18,C2,C25,C26,C3,C33,C34,C36,C41,C45,C47,C52,C63,C64,C66,C67,C7,C74,C78,D1,D2,D3,D5,D6,D9
lof_cds	Chr4	9258662	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	28	A1,B100,B101,B112,B119,B124,B16,B24,B26,B41,B43,B49,B5,B63,B90,B92,B95,C23,C45,C46,C49,C58,C59,C78,C8,C87,D2,D9
lof_cds	Chr4	9258682	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	23	A1,B100,B101,B112,B124,B16,B24,B26,B41,B43,B63,B90,B92,B95,C23,C45,C46,C49,C58,C59,C78,D2,D9
lof_cds	Chr4	9258687	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	23	A1,B100,B101,B112,B124,B16,B24,B26,B41,B43,B63,B90,B92,B95,C23,C45,C46,C49,C58,C59,C78,D2,D9
lof_cds	Chr4	9258690	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	19	A9,B102,B103,B109,B111,B12,B15,B4,B55,B67,B9,C10,C5,C54,C72,C82,C85,C9,D8
lof_cds	Chr4	9258701	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	1	C24
typical_cds_rare	Chr4	9258701	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	1	C24
typical_cds_rare	Chr4	9258709	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	4	B125,B90,B92,C87
typical_cds_rare	Chr4	9258710	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	3	B124,B44,B79
typical_cds_rare	Chr4	9258747	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	4	B20,B48,B73,C21
typical_cds_rare	Chr4	9258748	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	5	A6,B20,B48,B73,C21
lof_cds	Chr4	9258756	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	2	B124,B79
typical_cds_rare	Chr4	9258756	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	2	B124,B79
lof_cds	Chr4	9258859	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131022957	SmilChr04G000759	131022957	rna-XM_057952497.1	7	B134,B24,B47,B52,B65,B77,B84