source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr4	9813932	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	5	B132,B140,B18,B22,C27
typical_cds_rare	Chr4	9813938	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	4	B132,B22,B3,C27
typical_cds_rare	Chr4	9814155	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	2	B22,C39
typical_cds_rare	Chr4	9814163	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	2	B22,C39
lof_cds	Chr4	9814174	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	19	A23,A3,B112,B127,B128,B132,B18,B22,B24,B3,B30,B37,B51,B52,B69,C21,C27,C36,C65
lof_cds	Chr4	9814200	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	7	B109,B122,B139,B23,C16,C39,C80
lof_cds	Chr4	9814203	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	4	B139,C16,C39,C80
typical_cds_rare	Chr4	9814203	TGG	T	INDEL	2bp_deletion	CDS_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	4	B139,C16,C39,C80
lof_cds	Chr4	9814231	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	12	B104,B29,B34,B5,B73,B81,C18,C24,C27,C52,C70,C71
lof_cds	Chr4	9814236	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	12	B104,B29,B34,B5,B73,B81,C18,C24,C27,C52,C70,C71
lof_cds	Chr4	9814300	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	6	A13,B3,B51,B74,C38,C51
lof_cds	Chr4	9814319	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	5	B13,B29,B81,C18,C70
typical_cds_rare	Chr4	9814319	C	CAT	INDEL	2bp_insertion	CDS_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	5	B13,B29,B81,C18,C70
lof_cds	Chr4	9814320	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	5	B13,B29,B81,C18,C70
typical_cds_rare	Chr4	9814320	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	5	B13,B29,B81,C18,C70
lof_cds	Chr4	9814330	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	29	A2,A4,A6,A8,B102,B109,B118,B121,B122,B130,B139,B15,B22,B23,B48,B57,B78,B9,B97,C16,C21,C29,C39,C44,C54,C59,C75,C80,C82
lof_cds	Chr4	9814335	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	62	A1,A11,A21,B1,B100,B101,B103,B108,B114,B124,B132,B133,B134,B135,B137,B16,B24,B26,B30,B32,B35,B41,B42,B43,B47,B49,B5,B50,B56,B58,B59,B63,B64,B75,B77,B79,B87,B92,B95,B96,C1,C20,C23,C25,C34,C4,C43,C46,C48,C49,C58,C59,C63,C7,C76,C77,C78,C8,C82,D11,D4,D9
lof_cds	Chr4	9814346	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	60	A1,A11,A21,B1,B100,B101,B103,B108,B114,B124,B132,B133,B134,B135,B137,B16,B24,B26,B30,B32,B35,B41,B42,B43,B47,B49,B5,B50,B56,B58,B63,B64,B75,B77,B79,B87,B92,B95,B96,C1,C20,C23,C34,C4,C43,C46,C48,C49,C58,C59,C63,C7,C76,C77,C78,C8,C82,D11,D4,D9
lof_cds	Chr4	9814351	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	60	A1,A11,A21,B1,B100,B101,B103,B108,B114,B124,B132,B133,B134,B135,B137,B16,B24,B26,B30,B32,B35,B41,B42,B43,B47,B49,B5,B50,B56,B58,B63,B64,B75,B77,B79,B87,B92,B95,B96,C1,C20,C23,C34,C4,C43,C46,C48,C49,C58,C59,C63,C7,C76,C77,C78,C8,C82,D11,D4,D9
lof_cds	Chr4	9814461	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	37	A14,A15,A20,A6,B107,B108,B109,B11,B115,B118,B119,B136,B15,B17,B18,B2,B25,B26,B3,B44,B55,B71,B76,B85,C10,C16,C21,C32,C35,C39,C51,C67,C68,C74,C82,C9,D6
lof_cds	Chr4	9814462	GCC	G	INDEL	2bp_deletion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	37	A14,A15,A20,A6,B107,B108,B109,B11,B115,B118,B119,B136,B15,B17,B18,B2,B25,B26,B3,B44,B55,B71,B76,B85,C10,C16,C21,C32,C35,C39,C51,C67,C68,C74,C82,C9,D6
lof_cds	Chr4	9814521	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	6	A21,B134,B24,B49,C36,C8
lof_cds	Chr4	9814522	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	6	A21,B134,B24,B49,C36,C8
typical_cds_rare	Chr4	9814527	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	5	B118,B119,B18,C17,C27
typical_cds_rare	Chr4	9814635	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	4	B17,B85,C10,C59
lof_cds	Chr4	9814652	GTT	G	INDEL	2bp_deletion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	1	A23
typical_cds_rare	Chr4	9814652	GTT	G	INDEL	2bp_deletion	CDS_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	1	A23
lof_cds	Chr4	9814800	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	42	A14,A18,A4,B102,B107,B109,B114,B115,B118,B119,B130,B136,B139,B16,B18,B19,B25,B3,B37,B51,B55,B61,B67,B7,B71,B76,B78,B85,B98,B99,C10,C19,C26,C27,C30,C39,C50,C51,C54,C68,C72,C75
lof_cds	Chr4	9814856	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	5	A18,B119,B25,B61,B99
typical_cds_rare	Chr4	9814856	G	GTA	INDEL	2bp_insertion	CDS_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	5	A18,B119,B25,B61,B99
lof_cds	Chr4	9814864	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	26	A14,A18,B102,B109,B119,B130,B139,B140,B25,B3,B37,B48,B51,B55,B61,B67,B7,B71,B76,B85,B98,B99,C10,C30,C51,C54
lof_cds	Chr4	9814870	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	27	A14,A18,B102,B109,B119,B130,B139,B140,B25,B3,B37,B48,B51,B55,B61,B67,B7,B71,B76,B85,B98,C10,C30,C51,C55,C68,C72
lof_cds	Chr4	9814921	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	8	A6,B109,B119,B140,B67,B76,C51,C84
lof_cds	Chr4	9814923	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	7	A6,B109,B119,B140,B67,B76,C84
lof_cds	Chr4	9814926	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	13	B108,B112,B119,B140,B24,B32,B35,B49,B54,B59,C58,C78,C8
lof_cds	Chr4	9814927	T	TGA	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	7	A6,B109,B119,B140,B67,B76,C84
lof_cds	Chr4	9814930	CCA	C	INDEL	2bp_deletion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	13	B108,B112,B119,B140,B24,B32,B35,B49,B54,B59,C58,C78,C8
lof_cds	Chr4	9814934	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	13	B108,B112,B119,B140,B24,B32,B35,B49,B54,B59,C58,C78,C8
lof_cds	Chr4	9814943	A	ATG	INDEL	2bp_insertion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	45	A18,A2,B1,B100,B101,B108,B112,B117,B119,B124,B132,B133,B134,B137,B140,B24,B26,B27,B32,B35,B42,B43,B49,B54,B56,B59,B75,B77,B79,B87,B95,B96,C1,C34,C4,C43,C46,C58,C59,C7,C78,C8,C85,D4,D9
lof_cds	Chr4	9814945	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	47	A18,A2,B1,B100,B101,B108,B112,B117,B119,B124,B132,B133,B134,B137,B140,B24,B26,B27,B32,B35,B42,B43,B49,B54,B56,B58,B59,B75,B77,B79,B87,B95,B96,C1,C23,C34,C4,C43,C46,C58,C59,C7,C78,C8,C85,D4,D9
lof_cds	Chr4	9814984	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	13	B100,B101,B117,B119,B24,B47,B56,B65,B75,B96,C20,C78,C8
lof_cds	Chr4	9814990	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	1	B41
typical_cds_rare	Chr4	9814990	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	1	B41
lof_cds	Chr4	9815003	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	7	A20,B102,B109,B76,B78,C10,C16
lof_cds	Chr4	9815007	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	7	A20,B102,B109,B76,B78,C10,C16
lof_cds	Chr4	9815010	CTG	C	INDEL	2bp_deletion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	7	A20,B102,B109,B76,B78,C10,C16
lof_cds	Chr4	9815017	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	6	B102,B109,B76,B78,C10,C16
typical_cds_rare	Chr4	9815128	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	4	A18,B124,B16,B82
typical_cds_rare	Chr4	9815211	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	3	B112,B24,B41
typical_cds_rare	Chr4	9815377	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	3	A3,B52,C21
typical_cds_rare	Chr4	9815396	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	1	B30
lof_cds	Chr4	9815457	G	GCC	INDEL	2bp_insertion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	4	B25,B71,B85,B92
typical_cds_rare	Chr4	9815457	G	GCC	INDEL	2bp_insertion	CDS_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	4	B25,B71,B85,B92
lof_cds	Chr4	9815505	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	15	A3,B119,B127,B132,B140,B18,B3,B30,B37,B52,B69,C21,C27,C30,C65
typical_cds_rare	Chr4	9815513	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	1	C78
lof_cds	Chr4	9815542	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	2	B71,B85
typical_cds_rare	Chr4	9815542	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	2	B71,B85
typical_cds_rare	Chr4	9815578	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022642	SmilChr04G000794	131022642	rna-XM_057952152.1,rna-XM_057952153.1	2	B140,B24