source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr4	10436991	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	5	B18,B39,B85,C22,C73
typical_cds_rare	Chr4	10437006	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	4	B12,B77,C41,C72
typical_cds_rare	Chr4	10437034	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	4	B39,B85,C25,C73
typical_cds_rare	Chr4	10437045	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	3	A24,B94,C80
lof_cds	Chr4	10437078	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	11	B115,B26,B55,C26,C34,C39,C40,C48,C7,C78,C87
lof_cds	Chr4	10437084	C	CTA	INDEL	2bp_insertion	frameshift_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	6	B104,B33,C30,C56,C57,D9
lof_cds	Chr4	10437087	CCT	C	INDEL	2bp_deletion	frameshift_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	6	B104,B33,C30,C56,C57,D9
lof_cds	Chr4	10437165	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	2	B10,B122
typical_cds_rare	Chr4	10437165	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	2	B10,B122
typical_cds_rare	Chr4	10437171	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	1	C24
lof_cds	Chr4	10437198	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	12	B105,B120,B14,B22,B43,B59,B94,C11,C23,C4,C44,C87
lof_cds	Chr4	10437211	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	29	A13,A25,A6,A7,B10,B11,B111,B14,B43,B49,B60,B68,B71,B80,B84,C2,C20,C23,C35,C45,C58,C68,C70,C75,C8,C82,D1,D2,D5
typical_cds_rare	Chr4	10437215	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	5	A19,B104,B115,B55,D9
lof_cds	Chr4	10437220	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	3	B43,B60,C27
typical_cds_rare	Chr4	10437220	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	3	B43,B60,C27
lof_cds	Chr4	10437229	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	51	A4,B1,B101,B105,B120,B128,B129,B132,B134,B138,B14,B18,B22,B24,B29,B38,B40,B41,B43,B45,B58,B59,B61,B63,B82,B83,B85,B86,B87,B94,B98,C11,C20,C23,C24,C28,C33,C35,C4,C40,C44,C49,C61,C62,C68,C7,C80,C82,C85,C87,D1
lof_cds	Chr4	10437231	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	45	A4,B1,B101,B105,B120,B128,B132,B134,B14,B18,B22,B23,B24,B29,B38,B40,B43,B45,B59,B61,B63,B82,B85,B86,B87,B94,B98,C11,C20,C23,C24,C28,C35,C4,C40,C44,C49,C61,C62,C7,C80,C82,C85,C87,D1
typical_cds_rare	Chr4	10437237	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	2	C33,C68
lof_cds	Chr4	10437244	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	1	B11
typical_cds_rare	Chr4	10437244	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	1	B11
typical_cds_rare	Chr4	10437250	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	2	C47,C68
typical_cds_rare	Chr4	10437257	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	2	C47,C68
lof_cds	Chr4	10437264	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	19	A13,A19,B10,B104,B105,B139,B140,B33,B44,B6,C19,C2,C29,C30,C4,C54,C56,C57,C76
lof_cds	Chr4	10437283	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	53	A1,A10,A21,A22,A3,A9,B11,B110,B111,B114,B123,B131,B135,B138,B17,B19,B23,B24,B27,B28,B35,B47,B50,B53,B55,B57,B73,B76,B80,B89,B91,B95,C17,C23,C24,C30,C35,C4,C41,C42,C44,C48,C52,C57,C6,C63,C64,C66,C77,C78,C87,D11,D4
lof_cds	Chr4	10437284	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	4	A13,B139,B140,C76
typical_cds_rare	Chr4	10437284	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	4	A13,B139,B140,C76
lof_cds	Chr4	10437288	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	56	A1,A10,A21,A22,A3,A9,B11,B110,B111,B114,B123,B131,B135,B138,B17,B19,B22,B23,B24,B27,B28,B35,B46,B47,B50,B53,B55,B57,B73,B76,B80,B89,B91,B95,C17,C23,C24,C30,C35,C4,C41,C42,C44,C48,C52,C57,C59,C6,C63,C64,C66,C77,C78,C87,D11,D4
typical_cds_rare	Chr4	10437301	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	4	B71,B8,C65,C77
lof_cds	Chr4	10437324	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	5	A21,B82,C22,C74,D5
typical_cds_rare	Chr4	10437324	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	5	A21,B82,C22,C74,D5
typical_cds_rare	Chr4	10437333	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	1	B97
lof_cds	Chr4	10437339	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	1	B75
typical_cds_rare	Chr4	10437339	AAG	A	INDEL	2bp_deletion	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	1	B75
lof_cds	Chr4	10437369	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	3	B131,B9,C26
typical_cds_rare	Chr4	10437369	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	3	B131,B9,C26
typical_cds_rare	Chr4	10437390	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	4	B101,B24,B47,C58
typical_cds_rare	Chr4	10437426	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	2	B131,C26
lof_cds	Chr4	10437435	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	3	A4,B1,B7
typical_cds_rare	Chr4	10437435	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	3	A4,B1,B7
lof_cds	Chr4	10437453	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	46	A23,A24,B10,B100,B108,B12,B123,B125,B129,B132,B20,B21,B22,B31,B32,B36,B59,B64,B77,B86,B90,B92,B97,C14,C21,C23,C28,C3,C32,C34,C35,C42,C48,C50,C51,C57,C65,C68,C7,C70,C74,C77,C8,C83,C85,D6
typical_cds_rare	Chr4	10437480	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	5	B139,B140,B25,C76,C80
lof_cds	Chr4	10437481	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	1	B31
typical_cds_rare	Chr4	10437481	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	1	B31
typical_cds_rare	Chr4	10437489	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	3	B135,B60,C58
lof_cds	Chr4	10437495	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	53	A10,A23,A24,B10,B100,B108,B125,B129,B132,B133,B135,B140,B21,B22,B31,B32,B36,B59,B64,B66,B75,B77,B90,B92,B97,C10,C14,C21,C23,C28,C3,C32,C34,C35,C40,C42,C48,C50,C51,C57,C65,C68,C7,C70,C74,C77,C81,C83,C85,C86,D4,D5,D6
lof_cds	Chr4	10437513	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	69	A1,A10,A11,A21,A22,A24,A3,A9,B101,B104,B109,B11,B110,B111,B112,B113,B123,B132,B135,B138,B17,B18,B23,B27,B28,B35,B38,B4,B45,B50,B55,B57,B64,B65,B73,B76,B80,B85,B9,B98,C1,C17,C20,C21,C3,C35,C37,C4,C41,C44,C46,C48,C52,C57,C6,C61,C63,C64,C66,C7,C70,C71,C72,C74,C78,C87,D11,D4,D8
lof_cds	Chr4	10437546	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	24	A19,A3,B103,B104,B113,B115,B126,B21,B33,B5,B55,B72,B76,B80,B94,C19,C26,C29,C34,C40,C55,C56,C60,D9
typical_cds_rare	Chr4	10437547	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	4	B130,B25,C17,C80
lof_cds	Chr4	10437551	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	2	C62,C64
typical_cds_rare	Chr4	10437551	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	2	C62,C64
lof_cds	Chr4	10437573	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	2	B25,C79
typical_cds_rare	Chr4	10437573	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	2	B25,C79
lof_cds	Chr4	10437579	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	6	A1,B7,B71,C16,C44,C68
lof_cds	Chr4	10437606	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	3	B118,B126,B59
typical_cds_rare	Chr4	10437606	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	3	B118,B126,B59
typical_cds_rare	Chr4	10437616	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	5	B111,B127,B46,B83,B88
typical_cds_rare	Chr4	10437620	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	5	B111,C21,C47,C64,C65
lof_cds	Chr4	10437626	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	47	A1,A11,A18,A21,A22,A3,A9,B101,B11,B111,B12,B122,B123,B131,B132,B138,B17,B19,B24,B28,B35,B47,B5,B50,B53,B55,B57,B67,B73,B85,B91,B98,C17,C23,C30,C35,C48,C52,C54,C56,C61,C66,C77,C78,C87,C9,D11
lof_cds	Chr4	10437644	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	57	A10,A11,A21,A22,A3,A9,B101,B11,B110,B111,B112,B113,B114,B122,B123,B135,B138,B22,B23,B24,B35,B47,B50,B55,B66,B73,B76,B80,B85,B89,B95,B98,B99,C1,C17,C24,C3,C30,C35,C4,C41,C42,C46,C48,C52,C54,C56,C57,C6,C61,C64,C66,C77,C78,C87,D4,D8
lof_cds	Chr4	10437651	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	34	A1,A20,A25,A3,B104,B107,B11,B110,B121,B14,B15,B25,B31,B39,B45,B63,B7,B70,B71,B79,C10,C16,C22,C3,C37,C43,C44,C51,C68,C72,C79,C80,C83,D11
typical_cds_rare	Chr4	10437659	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	2	B25,C80
lof_cds	Chr4	10437677	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	63	A10,A11,A14,A15,A23,A3,A5,B10,B100,B107,B108,B110,B111,B112,B126,B132,B137,B15,B2,B23,B30,B31,B34,B4,B41,B42,B43,B52,B56,B58,B60,B63,B69,B71,B72,B73,B78,B8,B89,B93,B96,C16,C19,C27,C36,C39,C42,C45,C46,C47,C5,C51,C54,C61,C67,C7,C70,C77,C8,C83,C86,D7,D8
typical_cds_rare	Chr4	10437681	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	1	D3
typical_cds_rare	Chr4	10437683	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	4	B13,C49,C71,D7
lof_cds	Chr4	10437684	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	8	B118,B127,B3,B65,B89,C23,C64,D2
lof_cds	Chr4	10437690	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	14	A15,A16,B20,B56,B62,B95,B98,C34,C44,C62,C64,C66,C81,C86
lof_cds	Chr4	10437698	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	22	A19,A5,A8,B103,B118,B126,B19,B25,B30,B34,B43,B59,B97,C14,C20,C25,C30,C35,C37,C5,C63,C71
lof_cds	Chr4	10437711	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	4	A21,A3,C28,C3
typical_cds_rare	Chr4	10437711	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	4	A21,A3,C28,C3
lof_cds	Chr4	10437729	C	CCT	INDEL	2bp_insertion	frameshift_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	11	A22,A9,B11,B110,B113,B123,B73,C30,C56,C6,C61
typical_cds_rare	Chr4	10437730	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131022979	SmilChr04G000828	131022979	rna-XM_057952518.1	4	B120,C32,C38,C68