source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr4	11593387	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	2	A23,C42
typical_cds_rare	Chr4	11593392	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	4	B2,C12,C83,D5
typical_cds_rare	Chr4	11593393	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	2	B106,D10
typical_cds_rare	Chr4	11593398	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	2	A23,C42
typical_cds_rare	Chr4	11593406	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	A23
lof_cds	Chr4	11593423	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	19	A18,A2,A20,A22,B103,B121,B35,B58,B59,B6,B63,B70,B75,B81,C1,C4,C63,C65,C82
typical_cds_rare	Chr4	11593444	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	2	B113,C67
typical_cds_rare	Chr4	11593453	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B53
typical_cds_rare	Chr4	11593454	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	2	C67,D10
typical_cds_rare	Chr4	11593458	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	C67
lof_cds	Chr4	11593466	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	C42
typical_cds_rare	Chr4	11593466	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	C42
typical_cds_rare	Chr4	11593513	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B44
typical_cds_rare	Chr4	11593559	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	C85
typical_cds_rare	Chr4	11593567	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	2	B74,C56
lof_cds	Chr4	11593570	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	21	A1,A14,A19,A6,B117,B136,B45,B7,B72,B80,B83,B97,C20,C23,C28,C3,C38,C40,C6,C81,D11
lof_cds	Chr4	11593580	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	11	A13,A25,B104,B125,B47,B8,B90,B92,B99,C61,C87
typical_cds_rare	Chr4	11593602	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	D10
typical_cds_rare	Chr4	11593646	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B113
typical_cds_rare	Chr4	11593648	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	5	B24,B52,B64,D11,D6
typical_cds_rare	Chr4	11593695	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	5	B136,B85,B93,C10,C73
typical_cds_rare	Chr4	11593719	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	C18
lof_cds	Chr4	11593801	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	8	A18,A22,B121,B35,B70,B81,C65,C82
typical_cds_rare	Chr4	11593808	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	4	B22,B84,D7,D8
typical_cds_rare	Chr4	11593830	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B113
typical_cds_rare	Chr4	11593839	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B104
typical_cds_rare	Chr4	11593840	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	D10
typical_cds_rare	Chr4	11593853	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	D10
typical_cds_rare	Chr4	11593864	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	C84
lof_cds	Chr4	11593900	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	34	A10,A20,A25,B123,B129,B131,B14,B21,B25,B28,B34,B36,B5,B71,B76,B93,B95,B97,B98,C19,C23,C26,C32,C35,C39,C44,C50,C54,C57,C62,C68,C7,C75,C76
typical_cds_rare	Chr4	11593907	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B132
typical_cds_rare	Chr4	11593910	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B34
typical_cds_rare	Chr4	11593994	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B113
typical_cds_rare	Chr4	11593998	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B77
lof_cds	Chr4	11594011	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	2	B140,C43
typical_cds_rare	Chr4	11594011	G	GT	INDEL	1bp_insertion	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	2	B140,C43
lof_cds	Chr4	11594013	G	GTA	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	7	B126,B77,B78,C74,D3,D4,D9
typical_cds_rare	Chr4	11594019	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	4	B11,B124,B24,B32
typical_cds_rare	Chr4	11594040	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B24
typical_cds_rare	Chr4	11594076	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	2	A22,B44
typical_cds_rare	Chr4	11594129	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B113
typical_cds_rare	Chr4	11594135	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B131
lof_cds	Chr4	11594138	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	7	A2,A20,B103,B6,C1,C4,C63
typical_cds_rare	Chr4	11594146	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	A4
typical_cds_rare	Chr4	11594164	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B112
typical_cds_rare	Chr4	11594166	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	C8
typical_cds_rare	Chr4	11594186	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	3	B101,B22,D6
typical_cds_rare	Chr4	11594204	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B37
typical_cds_rare	Chr4	11594212	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	2	C15,D1
typical_cds_rare	Chr4	11594217	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	4	B111,B121,B29,D9
lof_cds	Chr4	11594219	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	10	A24,A7,B53,B58,B60,B67,B91,C60,C62,D2
typical_cds_rare	Chr4	11594220	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	2	B131,B41
typical_cds_rare	Chr4	11594230	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	4	B58,B60,C29,C40
lof_cds	Chr4	11594239	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	58	A10,A2,A20,A24,A5,B100,B112,B124,B13,B131,B136,B16,B18,B24,B26,B37,B39,B46,B47,B49,B5,B53,B54,B55,B60,B64,B67,B68,B78,B80,B82,B89,C12,C13,C17,C18,C21,C23,C40,C44,C46,C51,C53,C54,C55,C58,C60,C63,C7,C71,C72,C78,C79,C83,D2,D3,D5,D7
typical_cds_rare	Chr4	11594240	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	4	B104,B108,B34,C46
typical_cds_rare	Chr4	11594247	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	2	B131,B41
typical_cds_rare	Chr4	11594251	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B8
lof_cds	Chr4	11594267	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	19	A4,B129,B130,B134,B140,B26,B45,B51,B86,B9,C20,C26,C28,C34,C70,C71,C87,D5,D7
lof_cds	Chr4	11594268	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	5	B34,B77,B95,C46,C55
typical_cds_rare	Chr4	11594268	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	5	B34,B77,B95,C46,C55
lof_cds	Chr4	11594272	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B27
typical_cds_rare	Chr4	11594272	ACC	A	INDEL	2bp_deletion	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B27
lof_cds	Chr4	11594284	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	45	A1,A16,A18,A22,A23,A3,A8,B104,B107,B110,B113,B120,B137,B2,B20,B22,B26,B44,B49,B6,B66,B67,B69,B73,B79,B83,B99,C10,C15,C18,C41,C53,C59,C60,C67,C76,C77,C83,C87,D10,D11,D2,D5,D7,D8
typical_cds_rare	Chr4	11594288	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	2	B34,C82
lof_cds	Chr4	11594295	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B8
typical_cds_rare	Chr4	11594295	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B8
typical_cds_rare	Chr4	11594318	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	2	B32,C73
lof_cds	Chr4	11594320	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	25	B10,B12,B126,B127,B132,B138,B2,B21,B36,B41,B49,B61,B70,B72,B81,B85,B90,C2,C29,C31,C53,C63,C71,C9,D10
typical_cds_rare	Chr4	11594329	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	5	B34,B41,B81,C53,C63
typical_cds_rare	Chr4	11594330	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	5	B12,B32,C18,C54,C73
typical_cds_rare	Chr4	11594352	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	5	B124,B125,B26,B46,B98
typical_cds_rare	Chr4	11594362	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	2	B6,C87
typical_cds_rare	Chr4	11594374	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	3	B38,C21,D5
typical_cds_rare	Chr4	11594378	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	2	B134,B65
lof_cds	Chr4	11594396	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	21	A15,B11,B115,B118,B133,B137,B24,B32,B53,B79,C15,C26,C34,C42,C54,C57,C6,C71,C79,C80,C83
lof_cds	Chr4	11594399	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	11	A23,A8,B113,B2,B20,B49,B66,B79,B99,C10,C76
typical_cds_rare	Chr4	11594409	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B104
typical_cds_rare	Chr4	11594414	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	3	B79,C79,C80
lof_cds	Chr4	11594480	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	12	B132,B21,B5,B61,B72,B90,C29,C31,C49,C5,C71,C9
typical_cds_rare	Chr4	11594583	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	3	B33,C48,C68
typical_cds_rare	Chr4	11594601	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	D10
typical_cds_rare	Chr4	11594619	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B35
typical_cds_rare	Chr4	11594646	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	5	B60,B8,B99,C40,D9
typical_cds_rare	Chr4	11594652	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	C40
typical_cds_rare	Chr4	11594662	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	4	B101,B126,B54,C58
typical_cds_rare	Chr4	11594672	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	C4
typical_cds_rare	Chr4	11594673	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B56
lof_cds	Chr4	11594674	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B8
typical_cds_rare	Chr4	11594674	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023001	SmilChr04G000899	131023001	rna-XM_057952539.1	1	B8