source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr4	12539800	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	3	B124,B72,C51
lof_cds	Chr4	12539848	C	CTG	INDEL	2bp_insertion	frameshift_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	15	B15,B16,B40,B46,B47,B5,B71,B82,C14,C24,C26,C42,C49,C81,C82
lof_cds	Chr4	12539850	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	16	A9,B15,B16,B40,B46,B47,B5,B71,B82,C14,C24,C26,C42,C49,C81,C82
typical_cds_rare	Chr4	12539914	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	4	B26,C44,C56,C73
lof_cds	Chr4	12539920	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	2	C33,D4
typical_cds_rare	Chr4	12539920	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	2	C33,D4
typical_cds_rare	Chr4	12539950	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	C74
lof_cds	Chr4	12539968	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	2	B53,C52
typical_cds_rare	Chr4	12539968	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	2	B53,C52
typical_cds_rare	Chr4	12540011	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	4	B1,B14,B16,C45
typical_cds_rare	Chr4	12540032	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	5	B118,B15,C69,C74,D6
typical_cds_rare	Chr4	12540037	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	B71
typical_cds_rare	Chr4	12540096	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	D9
typical_cds_rare	Chr4	12540116	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	2	B74,C5
lof_cds	Chr4	12540118	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	23	A4,A9,B102,B110,B119,B123,B129,B130,B134,B136,B40,B63,B77,B78,B82,B93,C17,C22,C3,C32,C35,C60,C68
typical_cds_rare	Chr4	12540148	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	2	B81,C40
typical_cds_rare	Chr4	12540160	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	B13
lof_cds	Chr4	12540170	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	28	A4,A9,B102,B110,B119,B123,B129,B130,B134,B136,B20,B31,B40,B63,B7,B77,B78,B82,B93,C17,C22,C3,C32,C33,C35,C60,C62,C68
lof_cds	Chr4	12540175	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	97	A10,A11,A15,A2,A21,A24,A5,A6,A7,B1,B105,B106,B107,B108,B109,B11,B111,B113,B117,B118,B12,B121,B122,B135,B136,B16,B17,B22,B27,B31,B36,B37,B4,B45,B54,B55,B58,B61,B63,B65,B67,B68,B69,B70,B71,B72,B79,B80,B81,B82,B83,B84,B85,B87,B89,B9,B91,B93,B95,B98,B99,C15,C19,C2,C25,C29,C33,C34,C39,C40,C42,C45,C46,C48,C57,C58,C62,C63,C64,C66,C7,C73,C75,C79,C80,C82,C83,C85,C86,D1,D10,D2,D3,D5,D6,D7,D9
lof_cds	Chr4	12540187	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	13	A5,A7,B104,B115,B19,B21,B54,B62,B67,B86,B99,C28,C58
typical_cds_rare	Chr4	12540216	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	3	B104,B74,C5
lof_cds	Chr4	12540220	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	13	A5,A7,B115,B19,B21,B50,B54,B62,B67,B86,B99,C28,C58
lof_cds	Chr4	12540286	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	68	A10,A11,A21,A25,A6,A8,B105,B106,B107,B108,B109,B111,B117,B118,B12,B122,B134,B136,B140,B16,B19,B22,B27,B28,B35,B37,B4,B61,B63,B72,B80,B82,B84,B89,B9,B93,B95,B99,C1,C19,C2,C25,C29,C35,C36,C39,C40,C42,C43,C45,C46,C48,C58,C61,C62,C64,C66,C7,C73,C79,C80,C82,C83,C84,C85,D10,D2,D5
lof_cds	Chr4	12540299	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	B123
typical_cds_rare	Chr4	12540299	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	B123
typical_cds_rare	Chr4	12540418	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	4	A24,B103,B64,C33
lof_cds	Chr4	12540425	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	4	A11,B19,B99,C28
typical_cds_rare	Chr4	12540425	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	4	A11,B19,B99,C28
typical_cds_rare	Chr4	12540432	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	5	A11,B19,B79,B99,C28
typical_cds_rare	Chr4	12540469	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	D6
lof_cds	Chr4	12540497	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	8	A22,B112,B113,B18,B77,B80,C66,D11
lof_cds	Chr4	12540516	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	4	B84,C25,C7,C86
typical_cds_rare	Chr4	12540516	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	4	B84,C25,C7,C86
typical_cds_rare	Chr4	12540520	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	D6
typical_cds_rare	Chr4	12540538	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	C54
typical_cds_rare	Chr4	12540574	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	C5
typical_cds_rare	Chr4	12540587	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	B43
typical_cds_rare	Chr4	12540589	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	4	B23,C17,C56,D10
lof_cds	Chr4	12540601	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	41	A23,A7,B101,B113,B126,B13,B15,B21,B22,B26,B29,B31,B42,B43,B48,B51,B53,B64,B66,B67,B84,B99,C16,C18,C19,C2,C25,C31,C32,C36,C44,C5,C50,C62,C64,C67,C68,C7,C74,C8,D7
lof_cds	Chr4	12540616	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	19	B104,B112,B113,B119,B131,B135,B18,B2,B24,B41,C22,C25,C41,C52,C66,C74,C83,C87,D11
typical_cds_rare	Chr4	12540647	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	C54
typical_cds_rare	Chr4	12540654	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	5	A25,B109,B71,C44,D7
typical_cds_rare	Chr4	12540670	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	C56
lof_cds	Chr4	12540698	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	C56
typical_cds_rare	Chr4	12540698	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	C56
lof_cds	Chr4	12540713	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	B119
typical_cds_rare	Chr4	12540713	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	B119
typical_cds_rare	Chr4	12540730	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	B119
lof_cds	Chr4	12540734	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	4	B46,B73,C56,C77
typical_cds_rare	Chr4	12540734	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	4	B46,B73,C56,C77
typical_cds_rare	Chr4	12540748	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	B133
typical_cds_rare	Chr4	12540752	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	C23
typical_cds_rare	Chr4	12540779	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	2	B94,D9
typical_cds_rare	Chr4	12540804	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	5	B10,B103,B7,B94,D9
typical_cds_rare	Chr4	12540851	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	B103
typical_cds_rare	Chr4	12541100	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	C74
typical_cds_rare	Chr4	12541122	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	4	B79,C25,C33,C68
typical_cds_rare	Chr4	12541140	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	3	B88,B96,C6
typical_cds_rare	Chr4	12541154	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	B26
typical_cds_rare	Chr4	12541181	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023014	SmilChr04G000948	131023014	rna-XM_057952551.1	1	C75