source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr4	15020731	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	2	B10,C87
typical_cds_rare	Chr4	15020731	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	2	B10,C87
typical_cds_rare	Chr4	15020763	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	D3
typical_cds_rare	Chr4	15020783	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	C79
lof_cds	Chr4	15021185	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	D10
typical_cds_rare	Chr4	15021185	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	D10
lof_cds	Chr4	15021186	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	7	B115,B118,B53,C25,C26,C42,C57
lof_cds	Chr4	15021187	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	27	B120,B132,B21,B48,B49,B57,B60,B61,B72,B73,B75,B87,B90,B92,C27,C29,C31,C5,C55,C71,C73,C78,C84,D1,D10,D4,D9
lof_cds	Chr4	15021286	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	75	A20,A22,A23,A25,A4,A5,A7,B1,B109,B112,B113,B114,B117,B120,B122,B126,B127,B128,B129,B131,B135,B139,B22,B25,B26,B3,B34,B37,B46,B48,B5,B51,B54,B59,B63,B69,B7,B70,B71,B74,B8,B81,B83,B98,C13,C15,C16,C17,C18,C21,C26,C27,C28,C36,C37,C4,C44,C45,C46,C51,C54,C57,C59,C62,C68,C7,C76,C82,C84,C9,D11,D2,D4,D7,D9
typical_cds_rare	Chr4	15021309	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	B15
lof_cds	Chr4	15021313	T	TTA	INDEL	2bp_insertion	frameshift_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	2	B104,D10
typical_cds_rare	Chr4	15021313	T	TTA	INDEL	2bp_insertion	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	2	B104,D10
typical_cds_rare	Chr4	15021345	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	C43
lof_cds	Chr4	15021355	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	7	B106,B66,B82,C15,C79,C80,D5
typical_cds_rare	Chr4	15021364	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	5	B15,C25,C27,C43,D1
typical_cds_rare	Chr4	15021444	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	4	B11,B55,B85,C18
typical_cds_rare	Chr4	15021447	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	B11
lof_cds	Chr4	15021469	C	CTA	INDEL	2bp_insertion	frameshift_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	B11
typical_cds_rare	Chr4	15021469	C	CTA	INDEL	2bp_insertion	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	B11
typical_cds_rare	Chr4	15021525	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	D6
typical_cds_rare	Chr4	15021538	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	A2
typical_cds_rare	Chr4	15021540	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	2	B122,D6
typical_cds_rare	Chr4	15021570	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	3	B67,B84,D5
typical_cds_rare	Chr4	15021627	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	2	B33,C48
typical_cds_rare	Chr4	15021648	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	2	A3,D11
typical_cds_rare	Chr4	15021674	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	C85
typical_cds_rare	Chr4	15021718	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	3	B21,B95,C50
typical_cds_rare	Chr4	15021724	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	5	B21,B46,B73,C66,C75
typical_cds_rare	Chr4	15021767	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	B90
typical_cds_rare	Chr4	15021776	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	3	B46,C15,C53
typical_cds_rare	Chr4	15021809	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	B104
typical_cds_rare	Chr4	15021856	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	2	B104,D10
typical_cds_rare	Chr4	15021867	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	2	C24,C3
typical_cds_rare	Chr4	15021947	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	B104
lof_cds	Chr4	15021970	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	B50
typical_cds_rare	Chr4	15021970	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	B50
typical_cds_rare	Chr4	15022007	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	2	B41,C73
typical_cds_rare	Chr4	15022013	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	B41
typical_cds_rare	Chr4	15022015	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	B41
lof_cds	Chr4	15022026	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	D10
typical_cds_rare	Chr4	15022026	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	D10
typical_cds_rare	Chr4	15022067	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	2	B119,B16
lof_cds	Chr4	15022072	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	3	B94,C29,C52
typical_cds_rare	Chr4	15022072	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	3	B94,C29,C52
lof_cds	Chr4	15022122	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	7	A16,B105,B108,B27,B84,C43,D2
typical_cds_rare	Chr4	15022176	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	4	B1,B2,B37,B80
typical_cds_rare	Chr4	15022184	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	2	B57,C4
lof_cds	Chr4	15022210	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	30	A1,B115,B117,B130,B137,B14,B3,B36,B4,B41,B61,B64,B66,B80,B83,B87,B90,B91,B93,B97,C20,C26,C52,C68,C74,C80,C81,C87,D10,D6
lof_cds	Chr4	15022215	A	ATG	INDEL	2bp_insertion	frameshift_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	32	A1,B1,B115,B117,B130,B137,B139,B14,B3,B36,B4,B41,B61,B64,B66,B80,B83,B87,B90,B91,B93,B97,C20,C26,C52,C68,C74,C80,C81,C87,D10,D6
typical_cds_rare	Chr4	15022231	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	B104
typical_cds_rare	Chr4	15022330	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	3	A15,B80,B9
typical_cds_rare	Chr4	15022364	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	C49
typical_cds_rare	Chr4	15022607	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	B38
typical_cds_rare	Chr4	15022648	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	3	B17,B36,C80
typical_cds_rare	Chr4	15022755	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	4	A4,A6,B98,C29
typical_cds_rare	Chr4	15022764	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	3	B15,C43,D1
typical_cds_rare	Chr4	15022775	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	C87
lof_cds	Chr4	15022790	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	C73
typical_cds_rare	Chr4	15022790	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	C73
typical_cds_rare	Chr4	15022809	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	3	B13,B4,D4
typical_cds_rare	Chr4	15022812	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	1	B66
lof_cds	Chr4	15022817	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	5	B106,B66,B67,C80,D5
typical_cds_rare	Chr4	15022817	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	5	B106,B66,B67,C80,D5
lof_cds	Chr4	15022857	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	5	A13,B17,B21,B62,B91
typical_cds_rare	Chr4	15022857	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	5	A13,B17,B21,B62,B91
typical_cds_rare	Chr4	15022862	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	2	B15,D1
typical_cds_rare	Chr4	15022924	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	3	B2,B84,C30
lof_cds	Chr4	15022931	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	194	A1,A10,A11,A13,A14,A15,A16,A18,A19,A20,A21,A22,A23,A25,A3,A4,A7,A8,A9,B1,B10,B100,B101,B102,B103,B104,B105,B106,B107,B11,B111,B115,B118,B119,B120,B121,B123,B124,B125,B127,B128,B13,B131,B133,B134,B136,B137,B138,B139,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B28,B29,B3,B30,B34,B35,B36,B37,B39,B40,B41,B44,B45,B46,B47,B48,B49,B50,B52,B54,B55,B56,B57,B6,B61,B62,B63,B65,B66,B67,B69,B7,B70,B71,B72,B75,B76,B77,B78,B79,B8,B80,B82,B83,B84,B85,B86,B87,B88,B89,B9,B90,B91,B93,B94,B96,B97,B99,C10,C11,C12,C13,C14,C15,C16,C17,C18,C20,C21,C22,C23,C24,C25,C26,C27,C29,C3,C30,C33,C34,C35,C36,C38,C4,C40,C41,C42,C45,C46,C47,C49,C5,C50,C51,C52,C53,C54,C56,C57,C58,C59,C6,C60,C61,C63,C66,C67,C69,C7,C71,C72,C73,C74,C76,C77,C78,C79,C8,C80,C82,C83,C84,C86,C87,D11,D2,D3,D5,D7,D8,D9
typical_cds_rare	Chr4	15022963	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	3	A21,B101,B132
lof_cds	Chr4	15022979	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	158	A1,A10,A14,A16,A18,A19,A20,A21,A22,A23,A25,A3,A4,A7,A8,B10,B101,B102,B103,B104,B105,B106,B107,B115,B117,B118,B119,B120,B123,B124,B125,B127,B128,B13,B131,B133,B134,B136,B138,B140,B15,B17,B18,B19,B2,B20,B21,B22,B23,B25,B28,B29,B3,B34,B36,B37,B39,B40,B41,B44,B47,B48,B50,B52,B54,B55,B56,B57,B6,B61,B62,B63,B65,B66,B69,B7,B71,B72,B75,B76,B78,B8,B80,B82,B83,B84,B85,B86,B87,B88,B9,B90,B94,B96,B97,B99,C10,C13,C14,C15,C16,C17,C18,C20,C23,C24,C25,C27,C28,C29,C3,C34,C35,C36,C38,C4,C40,C41,C42,C45,C46,C47,C48,C49,C50,C52,C53,C54,C56,C57,C58,C59,C6,C60,C63,C65,C66,C67,C68,C7,C71,C72,C73,C74,C76,C78,C79,C80,C82,C83,C84,C86,C87,D10,D3,D4,D8,D9
lof_cds	Chr4	15023010	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	4	A19,A2,A24,B67
typical_cds_rare	Chr4	15023010	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	4	A19,A2,A24,B67
typical_cds_rare	Chr4	15023081	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	5	B140,B30,B33,C11,C3
lof_cds	Chr4	15023333	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	32	A2,A20,A8,B113,B119,B125,B16,B2,B20,B31,B42,B43,B49,B59,B6,B63,B66,B78,B79,B88,C10,C17,C31,C41,C45,C46,C52,C63,C74,C76,C85,D3
typical_cds_rare	Chr4	15023335	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	2	B120,B62
lof_cds	Chr4	15023336	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131023049	SmilChr04G001055	131023049	rna-XM_057952591.1	28	A1,B109,B11,B122,B123,B129,B137,B3,B32,B44,B61,B73,B81,B86,C14,C33,C34,C41,C42,C52,C55,C57,C6,C67,C71,C77,C82,C83