source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr4	20552912	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	1	B50
typical_cds_rare	Chr4	20552923	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	5	A3,B140,B52,C64,C81
typical_cds_rare	Chr4	20552929	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	1	B8
typical_cds_rare	Chr4	20552945	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	1	B50
lof_cds	Chr4	20552950	CGA	C	INDEL	2bp_deletion	frameshift_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	6	B85,C24,C48,C54,C59,C64
typical_cds_rare	Chr4	20552968	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	3	B122,B71,D11
typical_cds_rare	Chr4	20552977	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	2	C74,D6
typical_cds_rare	Chr4	20552980	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	4	B139,B63,B91,C5
typical_cds_rare	Chr4	20552983	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	4	B101,B13,C60,D5
typical_cds_rare	Chr4	20552995	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	2	B118,B73
typical_cds_rare	Chr4	20552999	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	1	C69
lof_cds	Chr4	20553012	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	61	A16,A3,A7,B103,B106,B115,B118,B12,B121,B13,B131,B134,B135,B16,B18,B26,B27,B3,B30,B40,B41,B52,B53,B55,B57,B60,B67,B70,B71,B76,B78,C11,C13,C14,C2,C22,C25,C28,C30,C33,C34,C4,C5,C54,C57,C58,C59,C60,C62,C65,C69,C7,C78,C8,C80,C81,C82,C83,D1,D7,D9
lof_cds	Chr4	20553019	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	19	A10,A22,B11,B131,B132,B135,B28,B47,B67,B76,C23,C30,C35,C44,C48,C54,C59,C6,C63
lof_cds	Chr4	20553028	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	19	A14,A15,A24,B105,B121,B130,B28,B44,B49,B60,B63,B79,B91,C30,C5,C54,C64,C84,D10
lof_cds	Chr4	20553040	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	6	A13,A14,B125,B133,D10,D11
lof_cds	Chr4	20553055	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	3	A8,B28,B80
typical_cds_rare	Chr4	20553055	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	3	A8,B28,B80
typical_cds_rare	Chr4	20553062	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	4	B136,B82,C39,C44
typical_cds_rare	Chr4	20553063	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	5	B113,B136,B15,C13,D4
typical_cds_rare	Chr4	20553064	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	1	C74
lof_cds	Chr4	20553067	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	27	A10,A7,B1,B100,B102,B108,B112,B122,B140,B2,B29,B3,B34,B50,B59,B71,B81,B83,C13,C15,C23,C47,C51,C55,C6,C68,C87
typical_cds_rare	Chr4	20553072	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	5	A8,B133,B135,B28,B80
lof_cds	Chr4	20553085	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	2	A14,D3
typical_cds_rare	Chr4	20553085	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	2	A14,D3
lof_cds	Chr4	20553092	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	4	B114,B47,B7,B9
typical_cds_rare	Chr4	20553092	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	4	B114,B47,B7,B9
lof_cds	Chr4	20553093	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	13	A13,A14,A15,A18,B133,B18,B21,B3,B7,B72,B98,C58,C72
typical_cds_rare	Chr4	20553100	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	4	B6,B8,B88,C67
lof_cds	Chr4	20553108	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	2	A8,B28
typical_cds_rare	Chr4	20553108	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	2	A8,B28
typical_cds_rare	Chr4	20553113	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	4	B44,C40,C86,D6
typical_cds_rare	Chr4	20553129	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	2	B1,B3
typical_cds_rare	Chr4	20553151	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	4	B139,B98,C18,C22
lof_cds	Chr4	20553164	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	5	B127,B13,B131,B140,B22
typical_cds_rare	Chr4	20553164	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	5	B127,B13,B131,B140,B22
typical_cds_rare	Chr4	20553175	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	3	B123,B124,C21
lof_cds	Chr4	20553178	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	7	B102,B103,B135,B33,B49,B78,C86
typical_cds_rare	Chr4	20553184	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	4	B18,B33,B52,B83
typical_cds_rare	Chr4	20553216	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	4	B101,B17,B37,C65
typical_cds_rare	Chr4	20553219	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	1	A25
typical_cds_rare	Chr4	20553236	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	2	B77,C45
typical_cds_rare	Chr4	20553246	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	5	A24,B125,B36,B99,C45
lof_cds	Chr4	20553250	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	5	A1,B41,B89,C17,C39
typical_cds_rare	Chr4	20553250	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	5	A1,B41,B89,C17,C39
typical_cds_rare	Chr4	20553258	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	5	A8,B28,B50,C42,C81
typical_cds_rare	Chr4	20553272	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	1	B65
typical_cds_rare	Chr4	20553278	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	2	B107,B65
lof_cds	Chr4	20553280	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	7	A1,B130,B35,B97,C72,D1,D6
typical_cds_rare	Chr4	20553282	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	2	B130,C83
typical_cds_rare	Chr4	20553290	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	3	B118,B73,B79
typical_cds_rare	Chr4	20553292	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	2	B79,C69
typical_cds_rare	Chr4	20553293	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	3	B58,C77,C9
typical_cds_rare	Chr4	20553299	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	3	B58,C41,C9
typical_cds_rare	Chr4	20553302	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	1	B88
typical_cds_rare	Chr4	20553305	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	1	B111
typical_cds_rare	Chr4	20553307	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	2	B4,C87
typical_cds_rare	Chr4	20553350	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	1	B81
typical_cds_rare	Chr4	20553356	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	1	B81
typical_cds_rare	Chr4	20553368	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	3	B108,B124,B93
typical_cds_rare	Chr4	20553388	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	5	B21,B26,B54,C26,C39
typical_cds_rare	Chr4	20553397	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	1	B2
typical_cds_rare	Chr4	20553406	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	5	A20,B138,B71,C26,C46
typical_cds_rare	Chr4	20553417	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	3	B74,C14,C5
typical_cds_rare	Chr4	20553427	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	2	B21,C39
typical_cds_rare	Chr4	20553452	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	2	B138,C46
typical_cds_rare	Chr4	20553484	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	2	B99,C87
typical_cds_rare	Chr4	20553512	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	1	B87
typical_cds_rare	Chr4	20553547	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	1	C82
lof_cds	Chr4	20553597	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	1	C49
typical_cds_rare	Chr4	20553597	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	1	C49
typical_cds_rare	Chr4	20553619	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	5	B108,B127,B140,C62,C76
typical_cds_rare	Chr4	20553683	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	1	C72
lof_cds	Chr4	20553700	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	2	C86,D5
typical_cds_rare	Chr4	20553700	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	2	C86,D5
typical_cds_rare	Chr4	20553737	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	5	B102,B140,C42,C67,C68
typical_cds_rare	Chr4	20553756	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	5	B123,B95,C62,C86,D5
typical_cds_rare	Chr4	20553788	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	2	B102,C42
typical_cds_rare	Chr4	20553795	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	4	B123,B95,C62,D5
typical_cds_rare	Chr4	20553807	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	2	B123,C62
typical_cds_rare	Chr4	20553809	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	4	B102,B136,B8,C42
lof_cds	Chr4	20553820	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	33	A20,A25,A4,A7,B106,B118,B12,B120,B137,B19,B46,B55,B6,B65,B78,B83,B91,B96,C13,C17,C18,C28,C29,C31,C35,C37,C50,C53,C72,C81,C87,D2,D4
typical_cds_rare	Chr4	20553829	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	1	C74
typical_cds_rare	Chr4	20553834	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	4	B138,B92,C31,C52
lof_cds	Chr4	20553860	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	1	C72
typical_cds_rare	Chr4	20553860	ATG	A	INDEL	2bp_deletion	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	1	C72
typical_cds_rare	Chr4	20553870	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	2	B118,B73
typical_cds_rare	Chr4	20553914	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	5	B29,B43,C58,D11,D6
typical_cds_rare	Chr4	20553926	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	5	B131,B26,B47,B80,B98
typical_cds_rare	Chr4	20553929	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	2	A19,C32
typical_cds_rare	Chr4	20553935	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	3	B59,B94,C82
typical_cds_rare	Chr4	20553937	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	4	A24,B35,B94,C7
typical_cds_rare	Chr4	20553952	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	5	B119,B91,C27,C52,C65
typical_cds_rare	Chr4	20553966	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	1	B97
typical_cds_rare	Chr4	20553980	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	1	A9
typical_cds_rare	Chr4	20553990	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	3	B89,C51,D1
typical_cds_rare	Chr4	20553991	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	3	B89,C51,D1
typical_cds_rare	Chr4	20553996	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	5	B119,B91,C27,C52,C65
typical_cds_rare	Chr4	20553998	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	3	A20,A9,C87
lof_cds	Chr4	20554015	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	14	A7,B106,B120,B21,B75,B89,C35,C39,C51,C9,D1,D11,D4,D7
typical_cds_rare	Chr4	20554018	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	4	A7,C35,C9,D4
typical_cds_rare	Chr4	20554024	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	3	B89,C51,D1
typical_cds_rare	Chr4	20554026	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023126	SmilChr04G001288	131023126	rna-XM_057952669.1	2	B131,C18