source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr4	27958498	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	1	B35
typical_cds_rare	Chr4	27958498	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	1	B35
lof_cds	Chr4	27958511	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	4	A24,B35,B58,C32
typical_cds_rare	Chr4	27958511	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	4	A24,B35,B58,C32
typical_cds_rare	Chr4	27958525	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	4	A24,B35,B58,C32
typical_cds_rare	Chr4	27958535	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	4	A24,B35,B58,C32
typical_cds_rare	Chr4	27958586	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	3	B134,B65,B77
typical_cds_rare	Chr4	27958606	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	2	B42,B43
lof_cds	Chr4	27958673	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	15	A14,A18,A24,B103,B131,B24,B35,B58,B59,B75,B91,C3,C32,C60,C76
typical_cds_rare	Chr4	27958784	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	1	C14
typical_cds_rare	Chr4	27958881	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	5	A14,B103,B58,C14,C76
lof_cds	Chr4	27958905	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	5	A14,B103,B58,B91,C76
typical_cds_rare	Chr4	27958905	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	5	A14,B103,B58,B91,C76
typical_cds_rare	Chr4	27958946	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	1	C76
lof_cds	Chr4	27958956	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	1	C76
typical_cds_rare	Chr4	27958956	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	1	C76
typical_cds_rare	Chr4	27958966	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	1	C76
lof_cds	Chr4	27958971	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	20	A14,A21,A25,B138,B24,B35,B58,B59,B75,B76,C14,C3,C32,C37,C45,C68,C74,C83,C85,D11
lof_cds	Chr4	27959086	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	27	A14,A21,A25,A5,B131,B138,B140,B24,B35,B58,B59,B75,B76,B91,C14,C3,C32,C37,C45,C57,C60,C68,C74,C76,C83,C85,D11
lof_cds	Chr4	27959090	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	24	A14,A21,A24,A25,A5,B103,B131,B138,B140,B24,B58,B59,B75,B91,C14,C37,C45,C57,C60,C68,C74,C76,C83,C85
typical_cds_rare	Chr4	27959471	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	2	A21,C14
lof_cds	Chr4	27959512	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	3	A21,C14,C85
typical_cds_rare	Chr4	27959512	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	3	A21,C14,C85
typical_cds_rare	Chr4	27959636	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	3	B91,C3,C85
typical_cds_rare	Chr4	27959642	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	3	B91,C3,C85
typical_cds_rare	Chr4	27959647	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	3	B91,C3,C85
typical_cds_rare	Chr4	27959648	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	1	B91
lof_cds	Chr4	27959649	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	3	B91,C3,C85
typical_cds_rare	Chr4	27959649	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	3	B91,C3,C85
typical_cds_rare	Chr4	27959661	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	3	A3,B91,C2
lof_cds	Chr4	27959819	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	1	C39
typical_cds_rare	Chr4	27959819	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	1	C39
lof_cds	Chr4	27959821	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	1	C39
typical_cds_rare	Chr4	27959821	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	1	C39
lof_cds	Chr4	27959925	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	21	A14,A18,A24,A25,A5,B103,B140,B35,B58,B59,B75,B76,C14,C3,C45,C57,C60,C68,C74,C76,C83
typical_cds_rare	Chr4	27960060	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	1	C14
lof_cds	Chr4	27960560	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	28	A14,A18,A21,A24,A25,A5,B131,B138,B140,B24,B35,B58,B59,B75,B76,B91,C14,C3,C32,C37,C45,C57,C60,C68,C74,C76,C83,C85
typical_cds_rare	Chr4	27960758	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	4	A7,B136,B83,C59
lof_cds	Chr4	27960783	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	29	A14,A18,A21,A24,A25,A5,B103,B131,B138,B140,B24,B35,B58,B59,B75,B76,B91,C14,C3,C32,C37,C45,C57,C60,C68,C74,C76,C83,C85
typical_cds_rare	Chr4	27961185	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	1	C56
typical_cds_rare	Chr4	27961317	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	1	B121
lof_cds	Chr4	27961728	T	TGC	INDEL	2bp_insertion	frameshift_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	30	A14,A18,A21,A24,A25,A5,B103,B131,B138,B140,B24,B35,B58,B59,B75,B76,B91,C14,C3,C32,C37,C45,C57,C60,C68,C74,C76,C83,C85,D11
typical_cds_rare	Chr4	27961865	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	3	A24,B119,C42
typical_cds_rare	Chr4	27962132	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	1	B33
typical_cds_rare	Chr4	27962162	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	3	B117,B31,C14
lof_cds	Chr4	27962665	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	12	A18,A5,B103,B131,B138,B140,B35,B59,B76,C14,C83,D11
typical_cds_rare	Chr4	27962725	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	2	C14,D11
lof_cds	Chr4	27962738	ACG	A	INDEL	2bp_deletion	frameshift_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	9	A14,A5,B35,B59,B76,C14,C57,C74,D11
typical_cds_rare	Chr4	27962843	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	2	A7,B30
lof_cds	Chr4	27962966	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	1	A5
typical_cds_rare	Chr4	27962966	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	1	A5
typical_cds_rare	Chr4	27963098	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	1	C75
typical_cds_rare	Chr4	27963211	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	1	C6
lof_cds	Chr4	27963269	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	5	A5,B131,B138,B59,C68
typical_cds_rare	Chr4	27963269	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	5	A5,B131,B138,B59,C68
typical_cds_rare	Chr4	27963758	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	3	C14,C85,D11
typical_cds_rare	Chr4	27963775	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	1	C85
typical_cds_rare	Chr4	27963779	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	2	C14,C85
typical_cds_rare	Chr4	27963782	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	1	C85
typical_cds_rare	Chr4	27963819	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	2	C14,C85
typical_cds_rare	Chr4	27963827	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	2	C14,C85
typical_cds_rare	Chr4	27963867	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	2	C14,C85
typical_cds_rare	Chr4	27963882	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	2	A3,C2
typical_cds_rare	Chr4	27963887	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	2	C14,C85
typical_cds_rare	Chr4	27963898	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	2	C14,C85
lof_cds	Chr4	27963908	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	2	C14,C85
typical_cds_rare	Chr4	27963908	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	2	C14,C85
lof_cds	Chr4	27963925	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	2	C14,C85
typical_cds_rare	Chr4	27963925	T	TAA	INDEL	2bp_insertion	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	2	C14,C85
lof_cds	Chr4	27963946	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	2	C14,C85
typical_cds_rare	Chr4	27963946	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	2	C14,C85
lof_cds	Chr4	27963992	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	2	C14,C85
typical_cds_rare	Chr4	27963992	TGA	T	INDEL	2bp_deletion	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	2	C14,C85
lof_cds	Chr4	27963996	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	2	C14,C85
typical_cds_rare	Chr4	27963996	C	CAT	INDEL	2bp_insertion	CDS_variant	LOC131019574	SmilChr04G001692	131019574	rna-XM_057948149.1	2	C14,C85