source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr4	29220445	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	16	A19,A2,A22,A4,B1,B117,B123,B16,B17,B53,B70,B94,C59,C8,D6,D7
lof_cds	Chr4	29220452	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	18	A23,B108,B120,B126,B13,B22,B36,B45,B58,B69,B75,B8,B89,C10,C17,C27,C39,C48
typical_cds_rare	Chr4	29220482	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	4	A6,B125,B85,C87
typical_cds_rare	Chr4	29220489	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	1	B66
typical_cds_rare	Chr4	29220500	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	1	B35
typical_cds_rare	Chr4	29220518	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	3	B35,C33,C5
typical_cds_rare	Chr4	29220523	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	5	B121,B66,C2,C30,C33
lof_cds	Chr4	29220524	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	3	B34,C85,D10
typical_cds_rare	Chr4	29220524	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	3	B34,C85,D10
typical_cds_rare	Chr4	29220548	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	4	B108,B140,B59,C82
typical_cds_rare	Chr4	29220605	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	3	A23,C33,C5
lof_cds	Chr4	29220608	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	24	A25,A4,A9,B122,B2,B21,B54,B59,B76,B78,B86,B93,B95,B99,C15,C19,C25,C30,C31,C35,C45,C46,C53,C74
typical_cds_rare	Chr4	29220613	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	5	B78,C33,C38,C5,C52
typical_cds_rare	Chr4	29220634	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	1	D10
typical_cds_rare	Chr4	29220639	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	2	B41,C49
typical_cds_rare	Chr4	29220652	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	2	B108,C82
typical_cds_rare	Chr4	29220653	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	2	A23,D10
lof_cds	Chr4	29220662	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	147	A14,A15,A19,A2,A20,A22,A23,A24,A25,A3,A5,A6,A7,A8,B1,B100,B101,B103,B105,B106,B107,B108,B109,B110,B118,B120,B123,B125,B126,B127,B128,B129,B13,B131,B136,B140,B15,B16,B19,B22,B23,B24,B26,B28,B29,B3,B30,B33,B34,B36,B37,B38,B39,B4,B40,B42,B43,B45,B47,B48,B49,B50,B51,B52,B53,B55,B57,B60,B61,B62,B64,B65,B67,B68,B69,B7,B70,B72,B75,B77,B78,B79,B8,B80,B84,B86,B87,B89,B90,B92,B95,B97,B98,B99,C1,C10,C11,C12,C13,C16,C17,C21,C22,C23,C24,C27,C28,C29,C35,C39,C40,C41,C45,C47,C48,C49,C5,C52,C54,C55,C59,C6,C60,C61,C63,C64,C65,C66,C69,C7,C72,C76,C78,C79,C81,C82,C83,C85,C87,C9,D10,D2,D3,D4,D5,D6,D8
lof_cds	Chr4	29220674	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	5	A15,A3,B77,C45,C5
typical_cds_rare	Chr4	29220674	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	5	A15,A3,B77,C45,C5
typical_cds_rare	Chr4	29220686	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	2	B35,C2
typical_cds_rare	Chr4	29220713	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	2	A22,C37
typical_cds_rare	Chr4	29220725	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	1	D1
lof_cds	Chr4	29220808	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	71	A10,A13,A16,A20,A6,B108,B113,B120,B123,B125,B129,B130,B133,B135,B136,B140,B19,B23,B26,B30,B33,B36,B4,B45,B48,B52,B55,B56,B58,B65,B67,B71,B80,B83,B85,B89,B9,B90,B92,B95,B96,B98,B99,C16,C18,C24,C25,C26,C3,C36,C39,C46,C48,C49,C50,C53,C56,C6,C63,C64,C66,C67,C71,C73,C75,C76,C77,C78,C80,C82,C86
typical_cds_rare	Chr4	29220839	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	4	B123,B51,B65,C46
typical_cds_rare	Chr4	29220844	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	5	A1,A14,B51,B58,C41
lof_cds	Chr4	29220849	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	68	A2,A22,A24,A25,A3,A4,A5,A6,A9,B105,B122,B128,B131,B19,B2,B21,B26,B30,B37,B40,B50,B52,B53,B54,B59,B62,B68,B69,B72,B76,B78,B80,B86,B87,B93,B95,B98,B99,C1,C11,C12,C15,C16,C17,C19,C24,C28,C30,C31,C35,C39,C45,C46,C53,C54,C55,C6,C60,C64,C66,C69,C7,C74,C76,C81,C83,D3,D8
typical_cds_rare	Chr4	29220854	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	1	B86
typical_cds_rare	Chr4	29220873	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	2	B65,C46
typical_cds_rare	Chr4	29220883	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	5	A4,B16,B32,B70,B94
typical_cds_rare	Chr4	29220886	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	5	A1,B51,B58,C17,C41
lof_cds	Chr4	29220916	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	16	A15,B107,B109,B16,B61,B78,B84,B89,B95,B99,C10,C39,C41,C48,C49,C72
lof_cds	Chr4	29220919	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	1	C77
typical_cds_rare	Chr4	29220919	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	1	C77
lof_cds	Chr4	29220928	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	9	B107,B109,B61,B78,B84,B95,B99,C49,C72
lof_cds	Chr4	29220962	GAT	G	INDEL	2bp_deletion	frameshift_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	1	C67
typical_cds_rare	Chr4	29220962	GAT	G	INDEL	2bp_deletion	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	1	C67
lof_cds	Chr4	29220975	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	4	A20,A22,B30,C44
typical_cds_rare	Chr4	29220975	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	4	A20,A22,B30,C44
lof_cds	Chr4	29220981	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	16	A11,A2,A23,A8,B107,B127,B28,B45,B56,B6,B96,C34,C62,C67,C8,C87
lof_cds	Chr4	29220984	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	58	A15,A16,B100,B106,B117,B124,B126,B129,B13,B130,B132,B138,B139,B140,B15,B17,B27,B31,B41,B42,B43,B51,B52,B57,B58,B61,B64,B66,B68,B70,B72,B8,B82,B83,B84,B9,B90,B92,B95,C11,C14,C16,C23,C29,C33,C43,C47,C49,C52,C56,C57,C59,C65,C69,C70,C75,C80,C87
lof_cds	Chr4	29220992	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131019655	SmilChr04G001780	131019655	rna-XM_057948243.1	55	A16,A24,A5,A7,B1,B101,B102,B103,B108,B110,B112,B117,B119,B124,B126,B13,B133,B135,B18,B19,B23,B26,B29,B31,B38,B39,B42,B46,B58,B60,B64,B65,B69,B74,B85,B9,B97,C14,C18,C22,C28,C36,C37,C38,C40,C43,C46,C54,C58,C6,C74,C78,D10,D3,D5