source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr4	29590016	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	32	A3,B104,B109,B111,B114,B12,B125,B34,B35,B36,B38,B39,B41,B45,B63,B71,B89,B90,B92,C11,C13,C26,C41,C48,C5,C53,C61,C71,C72,C76,C87,D1
lof_cds	Chr4	29590055	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	1	B22
typical_cds_rare	Chr4	29590055	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	1	B22
lof_cds	Chr4	29590064	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	13	B122,B2,B21,B54,B59,B66,B76,B86,B95,B99,C19,C25,C79
lof_cds	Chr4	29590178	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	18	A3,A9,B111,B12,B132,B28,B4,B55,B60,B77,B98,C2,C20,C5,C72,C73,C82,D8
lof_cds	Chr4	29590179	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	97	A11,A13,A19,A20,A22,A23,A24,A25,A3,A4,A5,B102,B108,B110,B111,B112,B114,B115,B117,B118,B120,B122,B124,B127,B131,B135,B136,B137,B14,B140,B18,B19,B21,B22,B28,B31,B35,B36,B38,B4,B46,B47,B48,B53,B54,B55,B58,B59,B60,B63,B65,B66,B67,B69,B70,B74,B76,B77,B78,B81,B86,B93,B95,B96,B99,C10,C13,C18,C19,C2,C21,C22,C25,C30,C32,C33,C36,C37,C39,C41,C5,C52,C55,C57,C6,C65,C68,C69,C71,C72,C73,C79,C83,D3,D4,D5,D8
lof_cds	Chr4	29590182	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	34	A11,A13,A20,A22,A25,A5,B110,B117,B118,B122,B124,B137,B18,B19,B22,B31,B48,B53,B54,B58,B70,B74,B76,B81,B86,B93,C10,C2,C25,C36,C37,C65,D4,D5
lof_cds	Chr4	29590184	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	67	A14,A18,A21,A6,A7,B1,B10,B100,B103,B106,B109,B11,B113,B121,B13,B134,B138,B139,B15,B17,B2,B29,B34,B37,B4,B40,B41,B44,B45,B49,B5,B52,B57,B61,B64,B7,B72,B73,B79,B80,B83,B89,B94,B97,C1,C12,C15,C20,C26,C28,C3,C38,C40,C49,C50,C51,C56,C59,C61,C64,C66,C77,C78,C81,D1,D2,D9
lof_cds	Chr4	29590185	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	101	A11,A13,A19,A20,A22,A23,A24,A25,A3,A4,A5,A9,B102,B108,B110,B111,B112,B114,B115,B117,B118,B12,B120,B122,B124,B127,B131,B132,B135,B136,B137,B14,B140,B18,B19,B21,B28,B31,B35,B36,B38,B46,B47,B48,B53,B54,B55,B58,B59,B60,B63,B65,B66,B67,B69,B70,B74,B76,B77,B78,B81,B86,B93,B95,B96,B98,B99,C10,C13,C18,C19,C2,C21,C22,C25,C30,C32,C33,C36,C37,C39,C41,C5,C52,C55,C57,C6,C65,C68,C69,C71,C72,C73,C76,C79,C82,C83,D3,D4,D5,D8
lof_cds	Chr4	29590186	ACT	A	INDEL	2bp_deletion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	20	A10,B101,B119,B132,B24,B56,B68,B71,B85,B87,B99,C11,C44,C48,C68,C69,C70,C86,D10,D11
lof_cds	Chr4	29590194	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	152	A11,A14,A18,A19,A20,A21,A22,A24,A25,A3,A4,A6,A7,A9,B1,B10,B100,B102,B103,B106,B11,B110,B111,B112,B113,B114,B115,B117,B118,B12,B120,B122,B124,B127,B13,B131,B132,B134,B136,B137,B138,B139,B14,B140,B15,B17,B18,B19,B2,B21,B28,B29,B31,B35,B36,B37,B38,B4,B40,B45,B47,B49,B5,B52,B53,B54,B55,B57,B58,B59,B60,B61,B63,B64,B65,B66,B67,B7,B70,B72,B73,B74,B76,B77,B78,B79,B80,B83,B86,B89,B93,B94,B95,B96,B97,B98,B99,C1,C10,C12,C15,C18,C19,C2,C20,C21,C22,C25,C26,C28,C3,C30,C32,C33,C36,C38,C39,C40,C41,C49,C5,C50,C51,C52,C55,C56,C57,C58,C59,C6,C60,C61,C64,C65,C66,C68,C69,C71,C72,C73,C77,C78,C79,C81,C82,C83,D2,D3,D4,D5,D8,D9
lof_cds	Chr4	29590197	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	168	A11,A13,A14,A18,A19,A20,A21,A22,A23,A24,A25,A3,A4,A5,A6,A7,A9,B1,B10,B100,B102,B103,B106,B108,B11,B110,B111,B112,B113,B114,B115,B117,B118,B12,B120,B121,B122,B124,B127,B13,B131,B132,B134,B135,B136,B137,B138,B139,B14,B140,B15,B17,B18,B19,B2,B21,B22,B28,B29,B31,B34,B35,B36,B37,B38,B4,B40,B41,B44,B45,B46,B47,B48,B49,B5,B53,B54,B55,B57,B58,B59,B60,B61,B63,B64,B65,B66,B67,B69,B7,B70,B72,B73,B74,B76,B77,B78,B79,B80,B81,B83,B86,B89,B93,B94,B95,B96,B97,B98,B99,C1,C10,C12,C13,C15,C18,C19,C2,C20,C21,C22,C25,C26,C28,C3,C30,C32,C33,C36,C37,C38,C39,C40,C41,C49,C5,C50,C51,C52,C55,C56,C57,C58,C59,C6,C60,C61,C64,C65,C66,C68,C69,C71,C72,C73,C76,C77,C78,C79,C81,C82,C83,D2,D3,D4,D5,D8,D9
lof_cds	Chr4	29590210	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	23	B105,B130,B133,B138,B14,B16,B18,B27,B32,B42,B44,B6,B70,B84,B91,C17,C25,C36,C43,C47,C63,C66,C9
lof_cds	Chr4	29590214	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	23	B105,B130,B133,B138,B14,B16,B18,B27,B32,B42,B44,B6,B70,B84,B91,C17,C25,C36,C43,C47,C63,C66,C9
typical_cds_rare	Chr4	29590239	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	2	B41,D7
typical_cds_rare	Chr4	29590241	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	2	B12,B41
lof_cds	Chr4	29590284	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	94	A1,A10,A13,A18,A2,A23,A24,A7,A8,B100,B101,B107,B119,B12,B123,B125,B127,B128,B129,B132,B135,B136,B139,B16,B22,B24,B25,B26,B3,B30,B31,B38,B39,B41,B44,B45,B46,B47,B50,B51,B55,B56,B6,B61,B64,B65,B68,B69,B71,B72,B77,B8,B82,B85,B87,B89,B9,B95,B96,B99,C11,C13,C16,C18,C22,C23,C24,C26,C29,C34,C39,C4,C40,C41,C44,C46,C48,C5,C54,C56,C59,C61,C67,C68,C69,C74,C75,C79,C84,C85,C86,C87,D10,D6
lof_cds	Chr4	29590287	T	TGC	INDEL	2bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	84	A1,A10,A13,A18,A2,A23,A7,A8,B100,B107,B119,B12,B123,B125,B127,B128,B129,B132,B136,B139,B16,B22,B24,B25,B26,B3,B30,B31,B38,B39,B41,B44,B45,B46,B47,B50,B51,B55,B56,B6,B61,B64,B65,B69,B71,B72,B77,B8,B82,B87,B89,B9,B96,B99,C11,C13,C16,C18,C22,C23,C24,C26,C29,C34,C39,C4,C40,C41,C44,C48,C5,C56,C59,C61,C67,C68,C69,C75,C84,C85,C86,C87,D10,D6
lof_cds	Chr4	29590289	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	10	B56,B59,B66,B68,B71,B85,B95,C68,C70,C79
lof_cds	Chr4	29590300	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	28	A18,A24,A4,A9,B100,B101,B108,B113,B117,B128,B135,B17,B26,B3,B33,B47,B59,B78,C17,C30,C31,C45,C46,C49,C53,C54,C74,D7
lof_cds	Chr4	29590304	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	27	A18,A24,A4,A9,B100,B101,B108,B113,B117,B128,B135,B17,B26,B3,B33,B47,B78,C17,C30,C31,C45,C46,C49,C53,C54,C74,D7
typical_cds_rare	Chr4	29590316	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	1	D7
typical_cds_rare	Chr4	29590317	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	1	D7
typical_cds_rare	Chr4	29590339	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	1	B53
lof_cds	Chr4	29590340	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	20	A23,B107,B25,B30,B50,B56,B6,B65,B69,B77,B95,B96,C34,C46,C56,C57,C79,C85,C87,D6
lof_cds	Chr4	29590355	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	70	A11,A14,A20,A21,A22,A5,A7,B1,B10,B102,B11,B118,B120,B121,B124,B131,B134,B137,B140,B15,B2,B29,B34,B37,B38,B4,B40,B45,B49,B5,B52,B53,B57,B58,B73,B79,B81,B83,B97,C1,C10,C12,C15,C18,C19,C24,C27,C28,C3,C36,C37,C38,C50,C51,C55,C58,C6,C60,C64,C65,C72,C77,C78,C8,C81,D1,D2,D4,D5,D9
typical_cds_rare	Chr4	29590360	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	3	B132,B56,C11
lof_cds	Chr4	29590404	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	86	A10,A13,A23,B100,B105,B107,B108,B117,B125,B126,B129,B133,B135,B136,B16,B2,B21,B22,B24,B27,B30,B31,B32,B39,B50,B54,B55,B56,B59,B6,B61,B64,B65,B66,B68,B69,B70,B71,B72,B76,B82,B85,B87,B89,B95,B96,B99,C10,C11,C13,C16,C19,C23,C24,C25,C26,C30,C32,C34,C36,C39,C41,C44,C46,C47,C48,C49,C5,C56,C57,C58,C59,C61,C63,C66,C68,C7,C70,C74,C75,C79,C84,C85,C87,D10,D6
lof_cds	Chr4	29590420	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	50	A1,A10,A23,B101,B107,B128,B129,B135,B136,B16,B24,B30,B55,B56,B61,B64,B65,B68,B71,B72,B82,B85,B87,B89,B95,B96,B99,C11,C13,C16,C23,C24,C26,C32,C34,C39,C41,C44,C5,C56,C57,C58,C59,C61,C68,C75,C85,C87,D10,D6
lof_cds	Chr4	29590424	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	45	A1,A13,A23,B107,B125,B129,B135,B136,B16,B24,B30,B39,B55,B56,B61,B64,B65,B69,B72,B85,B89,B95,B96,C11,C13,C23,C24,C26,C34,C39,C41,C48,C5,C56,C57,C58,C59,C68,C74,C75,C84,C85,C87,D10,D6
typical_cds_rare	Chr4	29590426	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	4	B134,B81,C37,C6
lof_cds	Chr4	29590428	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	84	A1,A10,A13,A18,A23,A24,B101,B105,B107,B113,B117,B125,B126,B128,B129,B133,B135,B136,B16,B22,B24,B26,B27,B3,B30,B32,B33,B39,B55,B56,B6,B61,B64,B65,B66,B68,B69,B70,B71,B72,B85,B87,B89,B95,B96,B99,C10,C11,C13,C23,C24,C25,C26,C30,C32,C34,C36,C39,C40,C41,C44,C47,C48,C49,C5,C54,C56,C57,C58,C59,C61,C63,C66,C68,C7,C70,C74,C75,C79,C84,C85,C87,D10,D6
lof_cds	Chr4	29590430	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	91	A1,A10,A13,A18,A23,A24,B101,B105,B107,B113,B117,B125,B126,B128,B129,B133,B135,B136,B16,B2,B21,B22,B24,B26,B27,B3,B30,B31,B32,B33,B39,B54,B55,B56,B59,B6,B61,B64,B65,B66,B68,B69,B70,B71,B72,B76,B85,B87,B89,B95,B96,B99,C10,C11,C13,C19,C23,C24,C25,C26,C30,C32,C34,C36,C39,C40,C41,C44,C47,C48,C49,C5,C54,C56,C57,C58,C59,C61,C63,C66,C68,C7,C70,C74,C75,C79,C84,C85,C87,D10,D6
lof_cds	Chr4	29590456	CGT	C	INDEL	2bp_deletion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	1	B22
typical_cds_rare	Chr4	29590456	CGT	C	INDEL	2bp_deletion	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	1	B22
typical_cds_rare	Chr4	29590487	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	5	B120,B22,B31,B67,B75
typical_cds_rare	Chr4	29590530	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	3	B75,C30,C49
lof_cds	Chr4	29590535	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	1	B41
typical_cds_rare	Chr4	29590535	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	1	B41
typical_cds_rare	Chr4	29590611	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	1	B41
typical_cds_rare	Chr4	29590671	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	4	B125,B90,B92,C87
typical_cds_rare	Chr4	29590680	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	4	B125,B90,B92,C87
typical_cds_rare	Chr4	29590698	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	4	B44,C21,C22,C44
typical_cds_rare	Chr4	29590705	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	2	B75,C82
typical_cds_rare	Chr4	29590718	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	1	C1
typical_cds_rare	Chr4	29590750	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	3	B125,B90,C87
typical_cds_rare	Chr4	29590754	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	3	B41,C73,D8
lof_cds	Chr4	29590803	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	24	A16,A6,B106,B110,B123,B127,B133,B138,B16,B24,B27,B42,B43,B50,B6,B62,C15,C27,C34,C66,C8,C86,C9,D5
lof_cds	Chr4	29590827	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	37	A15,A16,A6,A8,B105,B106,B110,B126,B127,B130,B133,B14,B16,B24,B27,B33,B42,B43,B50,B51,B6,B62,B9,C14,C15,C25,C27,C34,C43,C47,C63,C66,C70,C8,C86,C9,D5
lof_cds	Chr4	29590861	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	1	B44
typical_cds_rare	Chr4	29590861	G	GT	INDEL	1bp_insertion	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	1	B44
typical_cds_rare	Chr4	29590936	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	4	B125,B90,B92,C87
typical_cds_rare	Chr4	29590955	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	3	B105,B18,C9
lof_cds	Chr4	29590995	T	TCG	INDEL	2bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	28	A15,A6,B105,B106,B126,B130,B133,B23,B24,B27,B32,B43,B50,B6,B84,B9,C14,C15,C25,C27,C34,C47,C52,C63,C64,C66,C70,C9
lof_cds	Chr4	29590998	TAC	T	INDEL	2bp_deletion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	32	A15,A6,B105,B106,B126,B130,B133,B23,B24,B27,B32,B43,B50,B51,B6,B70,B84,B9,B91,C14,C15,C25,C27,C34,C47,C52,C60,C63,C64,C66,C70,C9
typical_cds_rare	Chr4	29591022	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	1	B53
lof_cds	Chr4	29591091	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	1	B53
typical_cds_rare	Chr4	29591091	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	1	B53
typical_cds_rare	Chr4	29591099	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	3	B59,C10,C7
typical_cds_rare	Chr4	29591125	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	3	B125,B90,C87
typical_cds_rare	Chr4	29591176	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	1	B108
typical_cds_rare	Chr4	29591242	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	5	B10,B134,B81,C37,C6
lof_cds	Chr4	29591263	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	13	A4,A9,B17,B78,C17,C19,C30,C31,C35,C45,C46,C53,C74
typical_cds_rare	Chr4	29591286	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	5	B10,B134,B81,C37,C6
typical_cds_rare	Chr4	29591293	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	5	B10,B134,B81,C37,C6
lof_cds	Chr4	29591338	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	35	A1,A15,A16,A8,B105,B110,B123,B126,B130,B133,B18,B23,B32,B33,B37,B43,B44,B50,B51,B75,B84,B9,C14,C17,C29,C36,C43,C44,C47,C52,C63,C65,C80,C9,D5
lof_cds	Chr4	29591339	CTG	C	INDEL	2bp_deletion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	34	A1,A15,A16,A8,B105,B110,B123,B126,B130,B133,B18,B23,B32,B33,B37,B43,B44,B50,B51,B75,B84,B9,C14,C17,C29,C36,C43,C44,C47,C52,C63,C80,C9,D5
typical_cds_rare	Chr4	29591368	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	3	B118,B122,B65
lof_cds	Chr4	29591544	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	2	B10,C6
typical_cds_rare	Chr4	29591544	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	2	B10,C6
lof_cds	Chr4	29591612	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	13	A4,A9,B17,B78,C17,C19,C30,C31,C35,C45,C46,C53,C74
typical_cds_rare	Chr4	29591637	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	2	B82,C23
lof_cds	Chr4	29591795	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	9	B12,B34,B44,B75,B88,C4,C7,C76,D1
lof_cds	Chr4	29591800	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	9	B12,B34,B44,B75,B88,C4,C7,C76,D1
lof_cds	Chr4	29591814	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	55	A11,A20,A22,A24,A4,A9,B1,B10,B102,B110,B117,B118,B120,B122,B124,B134,B140,B17,B18,B19,B22,B31,B38,B39,B53,B58,B65,B74,B78,B81,B85,B97,C1,C17,C18,C19,C22,C28,C30,C31,C35,C36,C38,C42,C45,C46,C49,C50,C53,C6,C72,C73,C74,D4,D5
lof_cds	Chr4	29591870	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	17	A4,A9,B125,B17,B78,B90,B92,C17,C19,C30,C31,C35,C45,C46,C53,C74,C87
lof_cds	Chr4	29591910	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	13	A4,A9,B17,B78,C17,C19,C30,C31,C35,C45,C46,C53,C74
lof_cds	Chr4	29591991	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	154	A10,A11,A14,A19,A2,A20,A21,A22,A24,A25,A3,A4,A9,B1,B10,B101,B102,B110,B111,B112,B114,B115,B117,B118,B119,B12,B120,B122,B124,B127,B13,B131,B132,B134,B136,B139,B14,B140,B15,B17,B18,B19,B2,B21,B22,B24,B28,B31,B34,B35,B36,B38,B39,B4,B40,B45,B47,B48,B49,B52,B53,B54,B55,B56,B57,B58,B59,B6,B60,B63,B64,B65,B66,B68,B71,B74,B75,B76,B77,B78,B79,B81,B82,B83,B85,B86,B87,B88,B89,B93,B94,B95,B96,B97,B98,B99,C1,C10,C11,C17,C18,C19,C2,C20,C22,C23,C25,C28,C30,C32,C33,C35,C36,C38,C39,C4,C42,C44,C45,C46,C48,C49,C5,C50,C52,C53,C55,C57,C59,C6,C60,C61,C67,C68,C69,C7,C70,C71,C72,C73,C74,C76,C79,C82,C83,C86,D1,D10,D3,D4,D5,D6,D8,D9
typical_cds_rare	Chr4	29592190	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	4	B75,C7,C76,D11
lof_cds	Chr4	29592195	T	TGC	INDEL	2bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	19	A25,B122,B2,B21,B54,B59,B66,B76,B86,B93,B95,B99,C10,C19,C25,C39,C7,C79,D11
typical_cds_rare	Chr4	29592226	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	1	B52
lof_cds	Chr4	29592237	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	4	B10,B134,B81,C6
typical_cds_rare	Chr4	29592237	T	TCA	INDEL	2bp_insertion	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	4	B10,B134,B81,C6
lof_cds	Chr4	29592289	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	3	C7,C76,D1
typical_cds_rare	Chr4	29592289	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	3	C7,C76,D1
typical_cds_rare	Chr4	29592308	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	2	A21,B1
typical_cds_rare	Chr4	29592317	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	1	B52
typical_cds_rare	Chr4	29592384	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	4	B105,B62,C14,C9
typical_cds_rare	Chr4	29592441	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	2	A1,C29
lof_cds	Chr4	29592506	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	25	A1,A16,A6,B105,B106,B123,B133,B139,B24,B32,B37,B43,B51,B62,B70,C14,C17,C29,C34,C44,C47,C65,C70,C9,D2
lof_cds	Chr4	29592508	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	26	A1,A16,A6,B105,B106,B123,B133,B139,B24,B32,B37,B43,B51,B62,B70,C14,C17,C29,C34,C44,C47,C63,C65,C70,C9,D2
lof_cds	Chr4	29592531	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	38	A1,A16,A6,A8,B105,B106,B123,B126,B127,B133,B139,B16,B24,B27,B32,B37,B43,B51,B62,B70,B84,C14,C15,C17,C25,C27,C29,C34,C43,C44,C47,C60,C63,C64,C65,C70,C9,D2
lof_cds	Chr4	29592535	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131019682	SmilChr04G001810	131019682	rna-XM_057948271.1	37	A1,A16,A6,A8,B105,B106,B123,B126,B127,B133,B139,B24,B27,B32,B37,B43,B51,B62,B70,B84,C14,C15,C17,C25,C27,C29,C34,C43,C44,C47,C60,C63,C64,C65,C70,C9,D2