source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr4	31879112	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	27	A20,B117,B129,B133,B17,B20,B22,B32,B34,B37,B41,B43,B45,B47,B49,B51,B69,B76,C17,C25,C31,C41,C51,C57,C58,C75,D1
lof_cds	Chr4	31879141	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	13	B28,B4,B44,B55,B59,B76,B95,C2,C46,C52,C57,D10,D3
lof_cds	Chr4	31879142	G	GGC	INDEL	2bp_insertion	frameshift_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	13	B28,B4,B44,B55,B59,B76,B95,C2,C46,C52,C57,D10,D3
lof_cds	Chr4	31879144	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	12	B28,B4,B44,B55,B59,B76,B95,C2,C52,C57,D10,D3
lof_cds	Chr4	31879148	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	12	B28,B4,B44,B55,B59,B65,B76,B95,C2,C52,D10,D3
lof_cds	Chr4	31879151	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	12	B28,B4,B44,B52,B55,B59,B76,B95,C2,C52,D10,D3
typical_cds_rare	Chr4	31879177	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	5	B44,B59,B76,C2,D3
typical_cds_rare	Chr4	31879178	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	B48
typical_cds_rare	Chr4	31879189	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	5	B59,B76,C2,C49,D3
typical_cds_rare	Chr4	31879432	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	2	C83,C86
lof_cds	Chr4	31879447	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	5	A3,B132,B49,B99,C7
typical_cds_rare	Chr4	31879447	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	5	A3,B132,B49,B99,C7
typical_cds_rare	Chr4	31879468	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	4	B130,B87,C78,D9
lof_cds	Chr4	31879628	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	12	A1,B12,B139,B65,B77,C18,C21,C22,C29,C32,C44,C68
typical_cds_rare	Chr4	31879673	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	3	A5,B29,B44
typical_cds_rare	Chr4	31879699	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	B40
lof_cds	Chr4	31879700	GTT	G	INDEL	2bp_deletion	frameshift_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	4	A20,C24,C83,C86
typical_cds_rare	Chr4	31879700	GTT	G	INDEL	2bp_deletion	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	4	A20,C24,C83,C86
typical_cds_rare	Chr4	31879724	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	C81
typical_cds_rare	Chr4	31879733	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	4	B130,B87,C78,D9
lof_cds	Chr4	31879754	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	2	B22,B62
typical_cds_rare	Chr4	31879754	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	2	B22,B62
lof_cds	Chr4	31879756	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	B7
typical_cds_rare	Chr4	31879756	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	B7
typical_cds_rare	Chr4	31879757	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	2	B22,B62
typical_cds_rare	Chr4	31879783	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	B44
typical_cds_rare	Chr4	31879795	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	4	B125,B90,B92,C87
typical_cds_rare	Chr4	31879804	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	B22
typical_cds_rare	Chr4	31879835	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	4	B130,B87,C78,D9
lof_cds	Chr4	31879840	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	49	A14,A18,A6,A7,B10,B100,B103,B106,B107,B109,B11,B113,B121,B134,B19,B29,B34,B40,B41,B45,B5,B61,B72,B73,B78,B80,B83,B94,B97,C12,C15,C20,C24,C26,C28,C3,C38,C40,C51,C56,C61,C64,C66,C77,C81,C83,D1,D2,D4
typical_cds_rare	Chr4	31879849	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	3	A5,B29,B44
lof_cds	Chr4	31879862	CCA	C	INDEL	2bp_deletion	frameshift_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	B16
typical_cds_rare	Chr4	31879862	CCA	C	INDEL	2bp_deletion	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	B16
typical_cds_rare	Chr4	31879870	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	2	B108,B47
typical_cds_rare	Chr4	31879882	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	2	B14,B91
typical_cds_rare	Chr4	31879893	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	3	B32,B50,C74
lof_cds	Chr4	31879896	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	3	B130,C78,D9
typical_cds_rare	Chr4	31879896	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	3	B130,C78,D9
typical_cds_rare	Chr4	31879907	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	3	B80,C50,C59
typical_cds_rare	Chr4	31879910	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	B16
typical_cds_rare	Chr4	31879916	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	3	B130,C78,D9
lof_cds	Chr4	31880060	G	GTC	INDEL	2bp_insertion	frameshift_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	C4
typical_cds_rare	Chr4	31880060	G	GTC	INDEL	2bp_insertion	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	C4
lof_cds	Chr4	31880092	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	30	A1,A23,A6,B105,B108,B122,B123,B17,B22,B25,B27,B34,B6,B62,B69,B95,C14,C16,C2,C43,C45,C62,C63,C7,C76,C9,D1,D2,D3,D5
typical_cds_rare	Chr4	31880120	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	C33
typical_cds_rare	Chr4	31880127	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	B7
typical_cds_rare	Chr4	31880135	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	C4
lof_cds	Chr4	31880136	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	14	B102,B124,B18,B31,B44,B55,B64,B69,B79,C23,C38,C47,C58,D4
typical_cds_rare	Chr4	31880181	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	B25
typical_cds_rare	Chr4	31880222	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	B33
typical_cds_rare	Chr4	31880270	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	4	B130,B87,C78,D9
typical_cds_rare	Chr4	31880271	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	3	B3,B44,C9
lof_cds	Chr4	31880275	CTA	C	INDEL	2bp_deletion	frameshift_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	11	A15,A19,B120,B129,B137,B3,B54,B71,B90,C5,D8
lof_cds	Chr4	31880277	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	47	A18,A2,A23,A4,A5,B10,B105,B108,B11,B111,B113,B119,B136,B22,B25,B26,B30,B34,B46,B48,B49,B51,B56,B64,B66,B68,B7,B73,B75,B82,B88,B99,C14,C23,C25,C29,C31,C32,C38,C41,C47,C5,C64,C66,C75,C8,D1
typical_cds_rare	Chr4	31880284	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	4	B130,B87,C78,D9
typical_cds_rare	Chr4	31880297	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	B99
lof_cds	Chr4	31880320	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	C2
typical_cds_rare	Chr4	31880320	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	C2
typical_cds_rare	Chr4	31880379	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	2	B53,D7
lof_cds	Chr4	31880388	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	20	A16,B126,B131,B132,B27,B42,B43,B48,B51,B60,B84,B85,B88,C14,C30,C39,C49,C70,C75,C76
lof_cds	Chr4	31880398	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	4	B4,B97,C10,C61
typical_cds_rare	Chr4	31880398	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	4	B4,B97,C10,C61
typical_cds_rare	Chr4	31880404	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	2	A21,B65
lof_cds	Chr4	31880418	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	8	A11,B129,B89,B98,C26,C37,C72,C80
typical_cds_rare	Chr4	31880439	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	4	B130,B87,C78,D9
typical_cds_rare	Chr4	31880452	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	2	C44,D6
lof_cds	Chr4	31880455	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	B7
typical_cds_rare	Chr4	31880455	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	B7
typical_cds_rare	Chr4	31880474	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	B97
typical_cds_rare	Chr4	31880477	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	B97
typical_cds_rare	Chr4	31880541	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	2	B56,C58
typical_cds_rare	Chr4	31880552	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	2	B56,C58
typical_cds_rare	Chr4	31880568	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023304	SmilChr04G001965	131023304	rna-XM_057952851.1	1	C21