source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr4	31916464	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	2	B41,D11
lof_cds	Chr4	31916473	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	28	B102,B124,B18,B26,B34,B35,B44,B46,B50,B54,B55,B57,B64,B69,B76,B79,B88,C23,C27,C35,C38,C47,C55,C58,C7,C81,D11,D4
lof_cds	Chr4	31916474	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	153	A1,A11,A14,A15,A19,A2,A20,A21,A22,A24,A3,A4,A7,A9,B1,B105,B106,B108,B109,B110,B111,B112,B114,B115,B117,B118,B12,B120,B125,B127,B129,B130,B133,B137,B138,B139,B140,B16,B19,B2,B21,B22,B23,B24,B25,B28,B3,B30,B32,B33,B36,B37,B38,B39,B4,B47,B49,B5,B51,B53,B59,B6,B60,B62,B65,B67,B70,B72,B73,B74,B77,B78,B8,B80,B82,B83,B84,B86,B87,B89,B9,B90,B92,B93,B95,B96,B97,B98,B99,C1,C11,C13,C17,C18,C19,C20,C21,C22,C25,C26,C28,C29,C30,C31,C32,C33,C34,C36,C37,C39,C4,C41,C42,C44,C45,C46,C5,C50,C52,C53,C56,C57,C59,C6,C60,C63,C64,C65,C66,C67,C68,C69,C70,C71,C72,C73,C74,C75,C77,C78,C8,C80,C82,C83,C85,C87,D10,D3,D5,D6,D7,D8,D9
typical_cds_rare	Chr4	31916541	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	B85
typical_cds_rare	Chr4	31916558	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	5	B1,B125,B5,B59,C87
typical_cds_rare	Chr4	31916568	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	5	B1,B125,B5,B59,C87
typical_cds_rare	Chr4	31916585	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	4	B125,B5,B59,C87
typical_cds_rare	Chr4	31916590	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	3	B1,B5,B59
lof_cds	Chr4	31916619	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	2	B5,B59
typical_cds_rare	Chr4	31916619	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	2	B5,B59
typical_cds_rare	Chr4	31916720	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	5	B1,B5,B90,C50,C83
typical_cds_rare	Chr4	31916744	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	B5
lof_cds	Chr4	31916745	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	2	B90,C87
typical_cds_rare	Chr4	31916745	AAC	A	INDEL	2bp_deletion	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	2	B90,C87
typical_cds_rare	Chr4	31916747	CGT	*	INDEL	2bp_deletion	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	2	B90,C87
lof_cds	Chr4	31916750	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	2	B90,C87
typical_cds_rare	Chr4	31916750	CAA	C	INDEL	2bp_deletion	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	2	B90,C87
typical_cds_rare	Chr4	31916762	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	3	B5,B90,C87
typical_cds_rare	Chr4	31916778	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	4	B1,B5,B90,C87
typical_cds_rare	Chr4	31916780	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	4	B1,B5,B90,C87
typical_cds_rare	Chr4	31916793	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	3	B1,B5,B90
typical_cds_rare	Chr4	31916825	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	2	B118,B65
typical_cds_rare	Chr4	31916889	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	B1
typical_cds_rare	Chr4	31916894	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	B1
lof_cds	Chr4	31916896	ACG	A	INDEL	2bp_deletion	frameshift_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	B1
typical_cds_rare	Chr4	31916896	ACG	A	INDEL	2bp_deletion	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	B1
lof_cds	Chr4	31916900	G	GCC	INDEL	2bp_insertion	frameshift_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	B1
typical_cds_rare	Chr4	31916900	G	GCC	INDEL	2bp_insertion	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	B1
typical_cds_rare	Chr4	31917044	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	B125
typical_cds_rare	Chr4	31917048	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	B125
typical_cds_rare	Chr4	31917062	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	B125
lof_cds	Chr4	31917073	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	B125
typical_cds_rare	Chr4	31917073	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	B125
typical_cds_rare	Chr4	31917106	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	B125
typical_cds_rare	Chr4	31917131	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	B140
typical_cds_rare	Chr4	31917193	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	2	B59,C83
typical_cds_rare	Chr4	31917433	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	C50
typical_cds_rare	Chr4	31917508	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	2	B125,B59
lof_cds	Chr4	31917516	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	50	A14,A18,A6,A7,B10,B100,B103,B106,B107,B109,B11,B113,B115,B121,B134,B19,B29,B34,B40,B41,B45,B5,B61,B7,B72,B73,B78,B80,B83,B94,B97,C12,C15,C20,C24,C26,C28,C3,C38,C40,C51,C56,C61,C64,C66,C77,C81,D1,D2,D4
typical_cds_rare	Chr4	31917558	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	4	B1,B125,B59,C87
typical_cds_rare	Chr4	31917563	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	4	B1,B125,B59,C87
lof_cds	Chr4	31917647	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	C50
typical_cds_rare	Chr4	31917647	G	GAA	INDEL	2bp_insertion	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	C50
lof_cds	Chr4	31917651	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	C50
typical_cds_rare	Chr4	31917651	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	C50
lof_cds	Chr4	31917653	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	C50
typical_cds_rare	Chr4	31917653	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	C50
typical_cds_rare	Chr4	31917690	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	2	B100,C56
typical_cds_rare	Chr4	31917718	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	C83
typical_cds_rare	Chr4	31917781	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	2	B1,C50
typical_cds_rare	Chr4	31917790	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	2	B1,C50
typical_cds_rare	Chr4	31917803	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	5	A5,B104,B29,D10,D11
typical_cds_rare	Chr4	31917863	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	1	C21
typical_cds_rare	Chr4	31917995	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	3	B5,B59,C83
typical_cds_rare	Chr4	31918075	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	4	B125,B90,B92,C87
typical_cds_rare	Chr4	31918402	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	2	B41,D11
lof_cds	Chr4	31918476	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	21	A4,A9,B21,B30,B54,B76,B78,B82,B93,B95,C17,C19,C25,C30,C31,C35,C39,C45,C46,C53,C74
typical_cds_rare	Chr4	31918518	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023306	SmilChr04G001969	131023306	rna-XM_057952853.1	4	B5,B59,B82,C83
