source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr4	36513340	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	C38
typical_cds_rare	Chr4	36513344	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	3	B131,B91,C34
lof_cds	Chr4	36513352	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	71	A18,A23,A6,A7,B102,B110,B111,B114,B117,B118,B119,B120,B121,B122,B131,B132,B133,B135,B136,B140,B17,B19,B21,B27,B28,B29,B30,B31,B32,B38,B39,B44,B45,B46,B55,B57,B59,B66,B73,B77,B80,B81,B9,B91,B92,B97,B99,C14,C20,C21,C30,C33,C35,C40,C42,C48,C51,C52,C56,C57,C58,C6,C61,C64,C65,C66,C80,C83,C87,D11,D9
lof_cds	Chr4	36513361	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	10	A21,A5,B24,B29,B58,B63,B68,B80,B88,C32
typical_cds_rare	Chr4	36513370	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B1
typical_cds_rare	Chr4	36513394	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	A7
typical_cds_rare	Chr4	36513423	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	4	A21,B135,C17,C35
lof_cds	Chr4	36513427	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	15	B108,B15,B24,B27,B57,B61,B70,B74,B85,B94,C45,C46,C50,C52,D7
typical_cds_rare	Chr4	36513430	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	2	A21,B135
typical_cds_rare	Chr4	36513444	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	4	A21,B135,C58,D11
lof_cds	Chr4	36513449	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	3	A21,B118,B135
typical_cds_rare	Chr4	36513449	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	3	A21,B118,B135
typical_cds_rare	Chr4	36513464	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B1
typical_cds_rare	Chr4	36513465	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B1
typical_cds_rare	Chr4	36513468	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	3	A21,B135,B6
typical_cds_rare	Chr4	36513469	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	2	A21,B135
typical_cds_rare	Chr4	36513482	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B140
typical_cds_rare	Chr4	36513483	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B118
lof_cds	Chr4	36513487	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	6	B17,B29,B32,B73,B77,C30
lof_cds	Chr4	36513496	T	TCC	INDEL	2bp_insertion	frameshift_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	2	A21,B135
typical_cds_rare	Chr4	36513496	T	TCC	INDEL	2bp_insertion	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	2	A21,B135
lof_cds	Chr4	36513498	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	2	A21,B135
typical_cds_rare	Chr4	36513498	AAG	A	INDEL	2bp_deletion	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	2	A21,B135
lof_cds	Chr4	36513501	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	50	A1,A15,A2,A24,A3,A6,B101,B11,B112,B122,B129,B132,B133,B134,B137,B139,B2,B24,B31,B32,B34,B41,B5,B51,B58,B6,B75,B86,B9,B93,B97,B99,C18,C25,C28,C3,C30,C35,C44,C52,C63,C67,C73,C77,C79,C8,C9,D1,D2,D8
lof_cds	Chr4	36513509	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B135
typical_cds_rare	Chr4	36513509	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B135
lof_cds	Chr4	36513512	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B135
typical_cds_rare	Chr4	36513512	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B135
lof_cds	Chr4	36513518	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B135
typical_cds_rare	Chr4	36513518	T	TCA	INDEL	2bp_insertion	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B135
lof_cds	Chr4	36513520	ACT	A	INDEL	2bp_deletion	frameshift_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B135
typical_cds_rare	Chr4	36513520	ACT	A	INDEL	2bp_deletion	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B135
lof_cds	Chr4	36513534	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B135
typical_cds_rare	Chr4	36513534	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B135
lof_cds	Chr4	36513541	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	40	A23,A9,B101,B111,B114,B117,B119,B128,B134,B14,B18,B2,B32,B34,B45,B53,B61,B64,B7,B83,B85,B86,C10,C13,C15,C18,C32,C35,C37,C45,C49,C57,C68,C7,C72,C75,C9,D5,D8,D9
lof_cds	Chr4	36513544	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	40	A23,A9,B101,B111,B114,B117,B119,B128,B134,B14,B18,B2,B32,B34,B45,B53,B61,B64,B7,B83,B85,B86,C10,C13,C15,C18,C32,C35,C37,C45,C49,C57,C68,C7,C72,C75,C9,D5,D8,D9
typical_cds_rare	Chr4	36513560	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B53
typical_cds_rare	Chr4	36513572	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B114
typical_cds_rare	Chr4	36513585	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B140
typical_cds_rare	Chr4	36513589	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B104
lof_cds	Chr4	36513597	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B1
typical_cds_rare	Chr4	36513597	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B1
typical_cds_rare	Chr4	36513607	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	3	A7,B1,B102
typical_cds_rare	Chr4	36513690	GTT	*	INDEL	2bp_deletion	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	2	B124,D4
typical_cds_rare	Chr4	36513783	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	2	C57,C58
typical_cds_rare	Chr4	36513787	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	3	B131,B41,B99
typical_cds_rare	Chr4	36513806	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	C73
typical_cds_rare	Chr4	36513822	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	3	B120,B81,C48
lof_cds	Chr4	36513840	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	2	C58,D11
typical_cds_rare	Chr4	36513840	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	2	C58,D11
typical_cds_rare	Chr4	36513863	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	4	B28,B61,C39,D10
typical_cds_rare	Chr4	36513872	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	A7
typical_cds_rare	Chr4	36513877	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B104
lof_cds	Chr4	36513898	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	11	B119,B12,B121,B18,B80,B98,C17,C5,C60,C8,D4
typical_cds_rare	Chr4	36514044	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	C23
typical_cds_rare	Chr4	36514067	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	5	A15,B35,C13,C14,C38
typical_cds_rare	Chr4	36514074	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B140
lof_cds	Chr4	36514104	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	2	B122,C65
typical_cds_rare	Chr4	36514104	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	2	B122,C65
typical_cds_rare	Chr4	36514115	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	2	B61,C39
typical_cds_rare	Chr4	36514118	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	2	B124,B135
typical_cds_rare	Chr4	36514128	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	3	B44,C28,C47
typical_cds_rare	Chr4	36514134	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	4	B132,B5,C8,C80
typical_cds_rare	Chr4	36514143	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B124
typical_cds_rare	Chr4	36514166	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B108
lof_cds	Chr4	36514168	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	60	A18,A23,B102,B111,B114,B118,B119,B120,B121,B122,B13,B131,B132,B133,B135,B136,B140,B17,B19,B21,B22,B28,B29,B30,B32,B38,B44,B45,B46,B5,B57,B59,B66,B73,B77,B81,B89,B9,B90,B91,B92,B97,C20,C21,C30,C33,C40,C42,C48,C51,C52,C57,C64,C65,C66,C80,C82,C83,C87,D11
typical_cds_rare	Chr4	36514187	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	3	A20,C54,C86
typical_cds_rare	Chr4	36514188	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	4	B28,B5,C8,C80
typical_cds_rare	Chr4	36514208	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	5	A9,B76,C13,C18,C4
lof_cds	Chr4	36514211	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	6	B11,B133,B137,B41,B9,C26
typical_cds_rare	Chr4	36514213	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	B104
lof_cds	Chr4	36514258	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	18	A18,B102,B110,B111,B112,B120,B135,B136,B28,B80,B81,B91,C42,C48,C52,C64,C66,C82
typical_cds_rare	Chr4	36514315	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	2	B82,C31
typical_cds_rare	Chr4	36514319	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	4	B118,B121,B122,C65
typical_cds_rare	Chr4	36514332	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	5	B104,B123,B134,B93,C56
lof_cds	Chr4	36514381	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	9	A23,B133,B140,B44,B9,C48,C56,C87,D9
typical_cds_rare	Chr4	36514394	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	4	B18,B98,C17,C60
typical_cds_rare	Chr4	36514399	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	3	B123,B93,C56
typical_cds_rare	Chr4	36514410	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	3	B123,B93,C56
typical_cds_rare	Chr4	36514433	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	1	C23
typical_cds_rare	Chr4	36514443	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	5	B126,B7,C10,C16,C58
typical_cds_rare	Chr4	36514449	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	3	B41,C21,C29
typical_cds_rare	Chr4	36514472	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023377	SmilChr04G002254	131023377	rna-XM_057952915.1	2	B118,B121