source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr4	38253168	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	4	B44,C21,C29,D10
typical_cds_rare	Chr4	38253174	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	1	D10
typical_cds_rare	Chr4	38253191	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	5	A1,A18,B139,C18,C22
lof_cds	Chr4	38253197	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	125	A1,A14,A16,A18,A21,A23,A3,A5,A7,B1,B10,B100,B102,B103,B108,B111,B112,B113,B117,B119,B120,B121,B128,B129,B13,B130,B132,B133,B134,B136,B137,B139,B15,B17,B19,B2,B26,B27,B29,B33,B35,B36,B38,B39,B40,B42,B43,B44,B46,B47,B48,B50,B51,B52,B53,B54,B56,B57,B58,B6,B60,B61,B62,B64,B65,B66,B68,B69,B7,B72,B75,B76,B8,B80,B83,B84,B89,B91,B94,B96,C1,C11,C12,C13,C17,C18,C2,C20,C22,C23,C24,C26,C27,C28,C29,C3,C30,C35,C37,C40,C41,C42,C47,C49,C5,C55,C56,C57,C59,C63,C69,C70,C73,C74,C75,C76,C77,C79,C84,C86,C9,D1,D10,D2,D7
lof_cds	Chr4	38253209	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	126	A11,A13,A15,A18,A19,A20,A21,A22,A24,A4,A5,A6,A7,A9,B1,B101,B102,B103,B105,B106,B107,B11,B110,B115,B118,B120,B122,B123,B125,B126,B128,B130,B131,B132,B133,B137,B14,B140,B16,B17,B18,B19,B20,B21,B22,B23,B25,B30,B32,B33,B34,B35,B37,B41,B49,B50,B51,B52,B55,B59,B62,B63,B65,B66,B70,B74,B76,B77,B78,B79,B8,B82,B86,B87,B88,B89,B9,B90,B91,B92,B93,B95,B97,B99,C15,C17,C19,C2,C20,C21,C23,C25,C30,C31,C34,C35,C36,C39,C43,C44,C45,C46,C51,C52,C53,C54,C58,C59,C60,C61,C62,C64,C65,C67,C70,C71,C72,C74,C80,C83,C86,C87,D1,D11,D5,D6
typical_cds_rare	Chr4	38253236	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	5	A21,B1,B54,B91,C35
typical_cds_rare	Chr4	38253248	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	2	B59,C81
typical_cds_rare	Chr4	38253296	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	3	C16,C62,D3
typical_cds_rare	Chr4	38253331	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	4	B124,B79,C50,C8
typical_cds_rare	Chr4	38253371	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	2	B59,C81
typical_cds_rare	Chr4	38253385	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	1	B109
lof_cds	Chr4	38253396	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	1	C2
typical_cds_rare	Chr4	38253396	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	1	C2
lof_cds	Chr4	38253400	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	1	C2
typical_cds_rare	Chr4	38253400	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	1	C2
typical_cds_rare	Chr4	38253402	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	1	C2
lof_cds	Chr4	38253411	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	7	A10,A2,A8,B118,C58,C78,C9
typical_cds_rare	Chr4	38253418	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	1	B1
typical_cds_rare	Chr4	38253419	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	1	B104
typical_cds_rare	Chr4	38253429	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	1	C2
typical_cds_rare	Chr4	38253438	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	1	C75
lof_cds	Chr4	38253439	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	2	B109,C2
typical_cds_rare	Chr4	38253439	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	2	B109,C2
typical_cds_rare	Chr4	38253440	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	2	B59,C81
typical_cds_rare	Chr4	38253462	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	4	B131,B41,C32,C68
typical_cds_rare	Chr4	38253479	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	1	C2
typical_cds_rare	Chr4	38253485	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	2	B52,B88
typical_cds_rare	Chr4	38253513	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	3	B96,C47,D9
typical_cds_rare	Chr4	38253533	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	3	B70,C13,C57
typical_cds_rare	Chr4	38253545	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	2	B85,C30
typical_cds_rare	Chr4	38253548	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	3	B70,C13,C57
typical_cds_rare	Chr4	38253558	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	5	B65,B70,C13,C43,C57
lof_cds	Chr4	38253562	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	14	A14,B14,B26,B35,B43,B71,B73,B91,C13,C48,C56,C82,C9,D5
typical_cds_rare	Chr4	38253566	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	3	C13,C43,C57
lof_cds	Chr4	38253572	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	4	B42,B43,C11,C69
typical_cds_rare	Chr4	38253572	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	4	B42,B43,C11,C69
lof_cds	Chr4	38253573	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	137	A10,A11,A13,A15,A18,A19,A2,A20,A21,A22,A24,A25,A5,A6,A7,A8,B1,B101,B102,B103,B106,B107,B11,B110,B115,B118,B120,B122,B123,B124,B125,B126,B127,B128,B130,B131,B132,B133,B137,B14,B140,B16,B17,B18,B19,B20,B21,B22,B23,B24,B25,B30,B32,B33,B34,B35,B37,B4,B41,B48,B49,B5,B50,B51,B52,B55,B59,B62,B63,B65,B66,B70,B74,B76,B77,B78,B79,B8,B82,B86,B87,B88,B89,B9,B90,B91,B92,B93,B95,B97,B99,C12,C15,C17,C19,C2,C20,C21,C23,C25,C31,C33,C34,C36,C39,C4,C42,C43,C44,C46,C50,C51,C52,C53,C54,C58,C59,C60,C61,C62,C64,C65,C66,C67,C72,C78,C8,C80,C83,C84,C86,C87,C9,D1,D11,D5,D6
lof_cds	Chr4	38253580	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	1	B129
typical_cds_rare	Chr4	38253580	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	1	B129
lof_cds	Chr4	38253592	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	8	A1,A18,B111,B33,B47,B53,C18,C22
lof_cds	Chr4	38253628	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	3	B136,B59,C81
typical_cds_rare	Chr4	38253628	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	3	B136,B59,C81
typical_cds_rare	Chr4	38253635	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	2	B59,C81
typical_cds_rare	Chr4	38253643	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	1	C8
typical_cds_rare	Chr4	38253661	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	3	B124,B79,C50
typical_cds_rare	Chr4	38253681	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	2	B59,C81
lof_cds	Chr4	38253727	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	128	A11,A13,A15,A18,A19,A20,A21,A22,A24,A25,A5,A6,A7,B1,B101,B102,B103,B106,B11,B110,B115,B118,B120,B122,B123,B125,B126,B127,B128,B130,B131,B132,B133,B137,B14,B140,B16,B17,B18,B19,B20,B21,B22,B23,B24,B25,B32,B33,B35,B37,B4,B41,B48,B49,B5,B50,B51,B52,B55,B59,B62,B63,B65,B66,B70,B74,B76,B77,B78,B79,B8,B82,B86,B87,B88,B89,B9,B90,B91,B92,B93,B95,B97,B99,C12,C15,C17,C19,C2,C20,C21,C23,C25,C31,C33,C34,C36,C39,C4,C42,C43,C44,C46,C51,C52,C53,C54,C58,C59,C60,C61,C62,C64,C65,C66,C67,C70,C71,C72,C80,C83,C84,C86,C87,D1,D11,D5,D6
lof_cds	Chr4	38253731	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	47	A25,A4,A6,B104,B105,B109,B11,B112,B113,B114,B115,B138,B26,B3,B31,B45,B47,B49,B7,B71,B72,B73,B80,B82,B83,B94,B97,C10,C3,C4,C44,C48,C52,C57,C6,C60,C61,C64,C66,C68,C71,C75,C79,C82,D3,D4,D9
lof_cds	Chr4	38253732	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	2	B83,C59
typical_cds_rare	Chr4	38253732	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	2	B83,C59
typical_cds_rare	Chr4	38253736	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	1	C77
typical_cds_rare	Chr4	38253767	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	4	B131,B41,C32,C68
typical_cds_rare	Chr4	38253775	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	1	B44
typical_cds_rare	Chr4	38253798	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	3	B124,B79,C50
lof_cds	Chr4	38253806	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	31	A13,A25,B101,B11,B115,B122,B125,B130,B140,B25,B30,B59,B63,B70,B76,B78,B8,B86,B90,B92,B93,B95,C2,C21,C31,C39,C44,C53,C65,C87,D11
typical_cds_rare	Chr4	38253812	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	1	C45
typical_cds_rare	Chr4	38253821	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	4	B63,C21,C29,D10
lof_cds	Chr4	38253830	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	3	C21,C29,D10
typical_cds_rare	Chr4	38253830	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	3	C21,C29,D10
typical_cds_rare	Chr4	38253840	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	2	B59,C81
typical_cds_rare	Chr4	38253853	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	5	B131,B41,B84,C32,C68
lof_cds	Chr4	38253861	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	1	B44
typical_cds_rare	Chr4	38253861	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	1	B44
typical_cds_rare	Chr4	38253880	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	3	C21,C29,D10
lof_cds	Chr4	38253889	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	47	A19,A4,A6,B104,B105,B109,B11,B112,B113,B114,B115,B138,B26,B3,B31,B45,B47,B49,B7,B71,B72,B73,B80,B82,B83,B94,B97,C10,C3,C4,C44,C48,C52,C57,C6,C60,C61,C64,C66,C68,C71,C75,C79,C82,D3,D4,D9
typical_cds_rare	Chr4	38253902	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	4	B57,B88,C27,C55
typical_cds_rare	Chr4	38253907	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	1	B44
typical_cds_rare	Chr4	38253918	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	4	B131,B41,C32,C68
typical_cds_rare	Chr4	38253926	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	2	B120,B62
typical_cds_rare	Chr4	38253927	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	3	B124,B79,C8
typical_cds_rare	Chr4	38253939	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	2	B59,C81
typical_cds_rare	Chr4	38253940	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	1	B21
lof_cds	Chr4	38253944	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	3	C21,C29,D10
typical_cds_rare	Chr4	38253944	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131023404	SmilChr04G002375	131023404	rna-XM_057952944.1	3	C21,C29,D10