source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr4	38553613	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	2	B28,B71
typical_cds_rare	Chr4	38553624	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	2	B18,B69
typical_cds_rare	Chr4	38553640	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	2	A16,B105
typical_cds_rare	Chr4	38553641	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	2	A16,B105
lof_cds	Chr4	38553698	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	4	B85,C21,C29,C59
typical_cds_rare	Chr4	38553698	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	4	B85,C21,C29,C59
typical_cds_rare	Chr4	38553742	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	1	B17
typical_cds_rare	Chr4	38553750	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	3	A16,B105,D10
lof_cds	Chr4	38553756	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	2	A16,B105
typical_cds_rare	Chr4	38553756	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	2	A16,B105
typical_cds_rare	Chr4	38553777	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	3	B31,B43,B64
typical_cds_rare	Chr4	38553783	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	1	B46
typical_cds_rare	Chr4	38553803	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	2	B1,D2
typical_cds_rare	Chr4	38553822	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	1	C32
lof_cds	Chr4	38553846	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	99	A1,A15,A18,A22,A24,A4,A5,A6,A9,B101,B105,B106,B11,B110,B113,B114,B117,B123,B126,B128,B130,B131,B133,B137,B138,B139,B14,B140,B16,B18,B2,B23,B24,B25,B31,B32,B4,B45,B46,B47,B48,B49,B50,B51,B52,B60,B63,B64,B65,B66,B67,B7,B70,B72,B73,B77,B79,B80,B82,B88,B89,B9,B91,B97,B99,C10,C14,C15,C17,C18,C19,C25,C3,C30,C31,C33,C34,C35,C43,C44,C45,C46,C49,C50,C52,C53,C54,C60,C64,C65,C66,C67,C70,C71,C74,C80,C86,D11,D4
lof_cds	Chr4	38553875	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	3	B1,B102,C44
typical_cds_rare	Chr4	38553875	G	GC	INDEL	1bp_insertion	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	3	B1,B102,C44
typical_cds_rare	Chr4	38553910	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	4	B1,B46,B81,C44
lof_cds	Chr4	38553940	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	24	A24,A9,B108,B118,B12,B127,B138,B25,B28,B4,B56,B6,B71,B87,B93,B96,B98,C16,C38,C72,C78,C80,C85,D8
typical_cds_rare	Chr4	38553947	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	2	B131,C15
typical_cds_rare	Chr4	38553974	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	5	B20,B33,C11,C23,C69
typical_cds_rare	Chr4	38553982	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	1	B104
typical_cds_rare	Chr4	38553983	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	1	C79
typical_cds_rare	Chr4	38554170	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	3	B100,B104,C24
typical_cds_rare	Chr4	38554186	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	1	C81
lof_cds	Chr4	38554194	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	2	A6,B51
typical_cds_rare	Chr4	38554194	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	2	A6,B51
typical_cds_rare	Chr4	38554199	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	1	C86
lof_cds	Chr4	38554211	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	25	B103,B124,B125,B131,B140,B27,B29,B31,B45,B6,B63,B98,C18,C24,C46,C57,C65,C66,C7,C70,C76,C85,D3,D8,D9
typical_cds_rare	Chr4	38554222	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	5	A1,A11,B136,B26,B65
typical_cds_rare	Chr4	38554236	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	2	B125,C57
lof_cds	Chr4	38554241	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	28	A25,B103,B113,B140,B27,B45,B63,B68,B7,B85,B87,B96,B98,C31,C44,C57,C62,C64,C66,C7,C70,C76,C77,C82,C85,D3,D8,D9
lof_cds	Chr4	38554242	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	2	B113,B44
typical_cds_rare	Chr4	38554242	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	2	B113,B44
typical_cds_rare	Chr4	38554245	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	3	B36,B55,B94
typical_cds_rare	Chr4	38554256	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	3	A7,B104,B114
lof_cds	Chr4	38554265	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	9	B125,B76,B90,B92,C11,C23,C69,C77,C87
lof_cds	Chr4	38554270	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	39	A22,A9,B111,B123,B131,B132,B133,B137,B18,B2,B20,B27,B32,B54,B6,B66,B73,B8,B86,B88,B9,B93,B97,C10,C32,C33,C38,C4,C45,C46,C50,C51,C56,C59,C67,C72,D10,D11,D6
typical_cds_rare	Chr4	38554307	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	1	B104
lof_cds	Chr4	38554328	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	1	B5
typical_cds_rare	Chr4	38554328	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	1	B5
lof_cds	Chr4	38554331	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	1	C43
typical_cds_rare	Chr4	38554331	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	1	C43
lof_cds	Chr4	38554332	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	5	B123,B26,B74,C44,D5
typical_cds_rare	Chr4	38554332	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	5	B123,B26,B74,C44,D5
typical_cds_rare	Chr4	38554336	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	2	B72,D6
lof_cds	Chr4	38554352	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	8	B47,B49,B78,B99,C42,C43,C82,C86
lof_cds	Chr4	38554363	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	4	B114,B7,C30,C31
typical_cds_rare	Chr4	38554363	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	4	B114,B7,C30,C31
typical_cds_rare	Chr4	38554367	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	3	B23,B3,B58
typical_cds_rare	Chr4	38554372	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	2	C11,C69
lof_cds	Chr4	38554388	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	135	A13,A2,A21,A22,A23,A25,A6,A7,A9,B100,B101,B102,B103,B105,B107,B108,B11,B111,B112,B115,B12,B121,B122,B123,B124,B125,B127,B128,B13,B131,B133,B134,B136,B138,B14,B140,B15,B16,B17,B18,B2,B21,B25,B26,B29,B3,B30,B31,B32,B33,B35,B36,B38,B4,B40,B41,B44,B5,B50,B52,B54,B55,B59,B6,B62,B63,B64,B65,B66,B67,B69,B75,B77,B78,B8,B80,B84,B86,B87,B88,B91,B92,B94,B95,B99,C1,C11,C12,C16,C17,C19,C20,C21,C22,C23,C24,C25,C26,C30,C32,C35,C36,C37,C40,C42,C44,C45,C46,C49,C50,C52,C53,C6,C60,C62,C63,C66,C67,C69,C7,C72,C76,C8,C81,C82,C83,C84,C86,C87,D11,D3,D5,D6,D7,D9
lof_cds	Chr4	38554389	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	5	B125,B134,B33,B36,B67
typical_cds_rare	Chr4	38554389	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	5	B125,B134,B33,B36,B67
lof_cds	Chr4	38554399	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	11	B102,B103,B121,B134,B29,B40,B8,C12,C14,C62,D3
lof_cds	Chr4	38554401	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	11	B102,B103,B121,B134,B29,B40,B8,C12,C14,C62,D3
typical_cds_rare	Chr4	38554418	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	5	A4,B16,B56,C84,C85
typical_cds_rare	Chr4	38554422	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	3	A3,B45,C43
lof_cds	Chr4	38554424	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	1	C79
typical_cds_rare	Chr4	38554424	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	1	C79
typical_cds_rare	Chr4	38554428	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	3	A3,B45,C44
lof_cds	Chr4	38554433	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	13	A13,A4,B1,B43,B48,B50,B52,B60,C15,C47,C64,C81,D4
lof_cds	Chr4	38554450	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	153	A1,A10,A11,A13,A14,A16,A18,A2,A20,A3,A4,A5,A6,A7,A8,A9,B1,B101,B104,B105,B106,B107,B109,B11,B110,B113,B115,B118,B12,B123,B124,B126,B127,B13,B130,B132,B133,B134,B135,B137,B14,B15,B16,B17,B21,B22,B23,B25,B26,B27,B30,B36,B37,B39,B43,B44,B45,B47,B48,B50,B51,B52,B55,B56,B58,B60,B61,B64,B65,B67,B68,B7,B71,B72,B74,B75,B76,B78,B79,B80,B81,B82,B84,B86,B87,B89,B90,B91,B92,B93,B95,B99,C1,C10,C11,C12,C13,C15,C16,C18,C20,C21,C22,C24,C27,C28,C29,C3,C30,C32,C34,C36,C41,C42,C43,C45,C46,C47,C49,C54,C6,C60,C61,C63,C64,C65,C66,C68,C69,C7,C70,C72,C73,C74,C75,C77,C78,C79,C8,C81,C82,C83,C84,C85,C86,D11,D2,D3,D4,D5,D6,D7,D9
typical_cds_rare	Chr4	38554461	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023410	SmilChr04G002401	131023410	rna-XM_057952951.1	3	A10,B37,B85