source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr4	46096709	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	B5,C77
typical_cds_rare	Chr4	46096926	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	B54,D6
typical_cds_rare	Chr4	46096927	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	A21,B20,C10
typical_cds_rare	Chr4	46096928	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	4	B35,B54,C37,D6
typical_cds_rare	Chr4	46096969	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	C58
typical_cds_rare	Chr4	46097547	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	B5,C77
typical_cds_rare	Chr4	46097559	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	B35,C37
lof_cds	Chr4	46097568	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	6	B18,B53,B68,B69,C76,D8
typical_cds_rare	Chr4	46097583	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	A21,B20,C10
typical_cds_rare	Chr4	46097596	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	B5,C77
typical_cds_rare	Chr4	46097625	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	B5,C77
typical_cds_rare	Chr4	46097650	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	D10
lof_cds	Chr4	46097675	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	B54,D6
typical_cds_rare	Chr4	46097675	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	B54,D6
typical_cds_rare	Chr4	46097723	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	B64,C41
typical_cds_rare	Chr4	46097750	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	B23,B58,C2
typical_cds_rare	Chr4	46097780	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	B113,B68
lof_cds	Chr4	46097831	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	6	B124,B135,C16,C80,D3,D7
typical_cds_rare	Chr4	46097860	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	A21,B20,C10
typical_cds_rare	Chr4	46097882	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	C58
typical_cds_rare	Chr4	46097887	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	C58
typical_cds_rare	Chr4	46097933	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	A19,B109,C49
lof_cds	Chr4	46097936	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	A18,A21
typical_cds_rare	Chr4	46097936	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	A18,A21
lof_cds	Chr4	46097944	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	B23,B58,C2
typical_cds_rare	Chr4	46097944	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	B23,B58,C2
typical_cds_rare	Chr4	46097991	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	D10
typical_cds_rare	Chr4	46098138	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	D10
lof_cds	Chr4	46098183	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	B113,B68
typical_cds_rare	Chr4	46098183	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	B113,B68
typical_cds_rare	Chr4	46098186	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	C30
lof_cds	Chr4	46098191	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	A24,C42,C73
typical_cds_rare	Chr4	46098191	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	A24,C42,C73
lof_cds	Chr4	46098198	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	12	B111,B12,B34,B75,B8,B94,B95,B99,C37,C40,C51,D4
typical_cds_rare	Chr4	46098212	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	C27
lof_cds	Chr4	46098213	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	B23,B58,C2
typical_cds_rare	Chr4	46098213	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	B23,B58,C2
lof_cds	Chr4	46098220	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	45	A15,A6,B107,B113,B115,B122,B129,B130,B132,B137,B16,B24,B32,B45,B5,B50,B6,B63,B67,B71,B72,B80,B82,B85,B89,B97,B99,C17,C25,C28,C3,C32,C34,C38,C43,C48,C50,C53,C55,C58,C61,C63,C66,C68,C77
lof_cds	Chr4	46098314	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	B81,C6,D10
typical_cds_rare	Chr4	46098314	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	B81,C6,D10
lof_cds	Chr4	46098372	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	A21,B20,C10
typical_cds_rare	Chr4	46098372	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	A21,B20,C10
lof_cds	Chr4	46098415	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	4	B120,B140,B33,D7
typical_cds_rare	Chr4	46098415	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	4	B120,B140,B33,D7
typical_cds_rare	Chr4	46098433	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	C33,C35,C85
lof_cds	Chr4	46098465	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	C33,C35,C41
typical_cds_rare	Chr4	46098465	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	C33,C35,C41
lof_cds	Chr4	46098466	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	C33,C35,C41
typical_cds_rare	Chr4	46098466	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	C33,C35,C41
lof_cds	Chr4	46098491	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	17	B111,B118,B12,B31,B34,B41,B75,B8,B94,B95,B99,C2,C37,C40,C51,C57,D4
typical_cds_rare	Chr4	46098494	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	B81,C6
lof_cds	Chr4	46098499	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	40	A11,A19,A4,A5,A6,A9,B105,B109,B112,B120,B132,B138,B140,B2,B28,B29,B30,B37,B47,B62,B78,B91,C19,C22,C26,C27,C30,C31,C35,C38,C42,C45,C46,C53,C6,C74,C9,D2,D5,D7
typical_cds_rare	Chr4	46098560	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	B104
typical_cds_rare	Chr4	46098563	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	B5,C77
typical_cds_rare	Chr4	46098583	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	A21,B20,C10
typical_cds_rare	Chr4	46098587	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	5	B13,B35,B52,C45,D5
typical_cds_rare	Chr4	46098594	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	B35,C37
lof_cds	Chr4	46098617	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	C58
typical_cds_rare	Chr4	46098617	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	C58
typical_cds_rare	Chr4	46098618	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	B35,C37
lof_cds	Chr4	46098653	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	28	A11,A22,A23,A8,B1,B10,B101,B104,B140,B22,B24,B3,B46,B59,B69,B75,B96,C13,C23,C35,C4,C41,C73,C74,C8,C85,D10,D11
typical_cds_rare	Chr4	46098668	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	4	A19,B109,B112,C49
typical_cds_rare	Chr4	46098676	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	4	B14,B15,B40,C58
typical_cds_rare	Chr4	46098753	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	B54,D6
typical_cds_rare	Chr4	46098763	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	A23,B140,B69
lof_cds	Chr4	46098792	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	C20
typical_cds_rare	Chr4	46098792	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	C20
lof_cds	Chr4	46098811	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	10	A3,B119,B128,B46,B64,B66,C14,C22,C41,C86
typical_cds_rare	Chr4	46098836	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	4	B124,B135,C16,C80
typical_cds_rare	Chr4	46098864	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	C27
typical_cds_rare	Chr4	46098868	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	C20
lof_cds	Chr4	46098899	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	B35,C37
typical_cds_rare	Chr4	46098899	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	B35,C37
typical_cds_rare	Chr4	46098933	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	A23,B140,B69
lof_cds	Chr4	46099021	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	14	B107,B130,B63,B72,B73,B80,B85,B89,C26,C3,C44,C53,C64,C66
typical_cds_rare	Chr4	46099053	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	C84
typical_cds_rare	Chr4	46099092	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	5	A19,A21,B112,B20,C10
typical_cds_rare	Chr4	46099102	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	4	B114,B53,C32,C68
typical_cds_rare	Chr4	46099114	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	A21,B20,C10
lof_cds	Chr4	46099115	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	C58
typical_cds_rare	Chr4	46099115	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	C58
lof_cds	Chr4	46099145	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	190	A1,A10,A11,A14,A15,A16,A18,A2,A22,A23,A25,A3,A5,A7,A8,A9,B1,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B112,B115,B118,B119,B12,B121,B122,B123,B124,B125,B128,B129,B13,B130,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B19,B2,B20,B22,B23,B26,B28,B3,B31,B32,B33,B35,B36,B37,B38,B39,B40,B41,B44,B45,B47,B49,B5,B51,B52,B53,B55,B56,B57,B58,B60,B62,B63,B64,B65,B66,B67,B68,B7,B70,B71,B72,B73,B75,B78,B79,B8,B80,B81,B82,B83,B84,B85,B86,B87,B88,B89,B90,B91,B92,B93,B96,B98,C13,C14,C15,C16,C17,C18,C19,C2,C21,C23,C24,C25,C26,C27,C28,C29,C30,C31,C32,C34,C35,C36,C37,C38,C39,C4,C40,C41,C42,C44,C45,C46,C47,C48,C49,C5,C51,C52,C54,C55,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C7,C71,C72,C73,C78,C79,C8,C80,C82,C84,C85,C86,C87,D10,D2,D3,D5,D6,D7,D9
lof_cds	Chr4	46099151	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	190	A1,A10,A11,A14,A15,A16,A18,A2,A22,A23,A25,A3,A5,A7,A8,A9,B1,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B112,B115,B118,B119,B12,B121,B122,B123,B124,B125,B128,B129,B13,B130,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B19,B2,B20,B22,B23,B26,B28,B3,B31,B32,B33,B35,B36,B37,B38,B39,B40,B41,B44,B45,B47,B49,B5,B51,B52,B53,B55,B56,B57,B58,B60,B62,B63,B64,B65,B66,B67,B68,B7,B70,B71,B72,B73,B75,B78,B79,B8,B80,B81,B82,B83,B84,B85,B86,B87,B88,B89,B90,B91,B92,B93,B96,B98,C13,C14,C15,C16,C17,C18,C19,C2,C21,C23,C24,C25,C26,C27,C28,C29,C30,C31,C32,C34,C35,C36,C37,C38,C39,C4,C40,C41,C42,C44,C45,C46,C47,C48,C49,C5,C51,C52,C54,C55,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C7,C71,C72,C73,C78,C79,C8,C80,C82,C84,C85,C86,C87,D10,D2,D3,D5,D6,D7,D9
typical_cds_rare	Chr4	46099161	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	B132
typical_cds_rare	Chr4	46099165	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	B81,C6
lof_cds	Chr4	46099235	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	C20
typical_cds_rare	Chr4	46099235	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	C20
typical_cds_rare	Chr4	46099243	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	5	B23,B58,C2,C28,C58
typical_cds_rare	Chr4	46099291	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	B3,C13,C4
typical_cds_rare	Chr4	46099314	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	4	A11,B103,B46,C41
typical_cds_rare	Chr4	46099332	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	5	B28,B38,B95,C29,D8
typical_cds_rare	Chr4	46099397	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	B22
typical_cds_rare	Chr4	46099436	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	B104
typical_cds_rare	Chr4	46099438	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	B33,B44
typical_cds_rare	Chr4	46099447	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	B23,B58,C2
typical_cds_rare	Chr4	46099527	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	1	D10
typical_cds_rare	Chr4	46099528	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	A21,B20,C10
typical_cds_rare	Chr4	46099532	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	2	B35,C37
typical_cds_rare	Chr4	46099545	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023778	SmilChr04G002973	131023778	rna-XM_057953363.1	3	A16,C24,C8