source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr4	46901699	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	3	B121,B87,C29
typical_cds_rare	Chr4	46901725	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	4	A24,B14,B50,B72
lof_cds	Chr4	46901726	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	2	B122,C8
typical_cds_rare	Chr4	46901726	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	2	B122,C8
lof_cds	Chr4	46901732	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	40	A1,A10,A23,A3,A6,A7,B102,B103,B106,B111,B113,B124,B136,B140,B16,B22,B26,B35,B37,B42,B43,B62,B66,B68,B69,B74,B85,C10,C15,C26,C42,C43,C50,C51,C55,C74,C80,C81,D2,D7
typical_cds_rare	Chr4	46901751	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	2	B28,B42
typical_cds_rare	Chr4	46901762	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	5	B60,C15,C70,C72,C79
lof_cds	Chr4	46901763	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	9	B1,B101,B115,B124,B135,B48,B60,B78,B79
typical_cds_rare	Chr4	46901787	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	B95
typical_cds_rare	Chr4	46901805	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	4	B17,B28,B76,B90
typical_cds_rare	Chr4	46901821	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	4	A15,B109,B126,C20
typical_cds_rare	Chr4	46901829	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	C2
typical_cds_rare	Chr4	46901849	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	C2
typical_cds_rare	Chr4	46901851	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	3	B107,B66,B98
typical_cds_rare	Chr4	46901853	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	5	B28,B7,B76,C16,C62
typical_cds_rare	Chr4	46901874	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	5	B27,B72,B9,B90,B96
typical_cds_rare	Chr4	46901898	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	3	B102,B104,B90
typical_cds_rare	Chr4	46901907	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	A1
typical_cds_rare	Chr4	46901915	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	3	B28,B76,C16
typical_cds_rare	Chr4	46901923	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	5	B115,B137,C44,C54,C86
typical_cds_rare	Chr4	46901934	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	4	A14,B50,C33,C8
typical_cds_rare	Chr4	46901973	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	4	B102,B17,B90,B92
typical_cds_rare	Chr4	46901978	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	4	B115,B137,C54,C86
typical_cds_rare	Chr4	46901983	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	C49
lof_cds	Chr4	46901997	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	19	A16,A18,A4,B103,B11,B121,B129,B13,B26,B38,B39,B74,B81,B87,C37,C38,C50,C60,C84
lof_cds	Chr4	46902020	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	5	B137,B99,C53,C55,C74
typical_cds_rare	Chr4	46902020	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	5	B137,B99,C53,C55,C74
lof_cds	Chr4	46902023	G	GGC	INDEL	2bp_insertion	frameshift_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	27	A4,B12,B123,B140,B24,B36,B42,B43,B44,B46,B53,B56,B59,B60,B61,B72,B78,B96,B97,C24,C33,C42,C50,C70,C71,D10,D4
lof_cds	Chr4	46902035	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	3	B115,B86,C54
typical_cds_rare	Chr4	46902035	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	3	B115,B86,C54
lof_cds	Chr4	46902045	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	3	B102,B11,C75
typical_cds_rare	Chr4	46902045	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	3	B102,B11,C75
typical_cds_rare	Chr4	46902059	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	C8
typical_cds_rare	Chr4	46902076	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	3	B99,C53,C74
lof_cds	Chr4	46902083	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	C8
typical_cds_rare	Chr4	46902083	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	C8
typical_cds_rare	Chr4	46902088	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	2	B125,C87
typical_cds_rare	Chr4	46902111	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	3	B107,B66,B98
lof_cds	Chr4	46902116	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	23	B11,B114,B115,B123,B127,B34,B36,B42,B46,B61,B65,B78,B99,C18,C24,C29,C30,C53,C56,C6,C66,C71,C8
lof_cds	Chr4	46902122	C	CAG	INDEL	2bp_insertion	frameshift_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	23	B11,B114,B115,B123,B127,B34,B36,B42,B46,B61,B65,B78,B99,C18,C24,C29,C30,C53,C56,C6,C66,C71,C8
typical_cds_rare	Chr4	46902145	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	D10
typical_cds_rare	Chr4	46902146	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	3	A8,D1,D11
typical_cds_rare	Chr4	46902153	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	5	B104,B34,B76,C18,C6
lof_cds	Chr4	46902170	T	TCC	INDEL	2bp_insertion	frameshift_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	B69
typical_cds_rare	Chr4	46902170	T	TCC	INDEL	2bp_insertion	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	B69
lof_cds	Chr4	46902172	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	B69
typical_cds_rare	Chr4	46902172	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	B69
typical_cds_rare	Chr4	46902177	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	2	B140,C18
typical_cds_rare	Chr4	46902178	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	3	B107,B66,B98
typical_cds_rare	Chr4	46902179	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	C18
typical_cds_rare	Chr4	46902251	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	3	A18,B40,C61
lof_cds	Chr4	46902306	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	15	A16,A4,B103,B11,B129,B26,B38,B39,B74,B81,C37,C38,C50,C60,C84
typical_cds_rare	Chr4	46902330	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	3	B121,B13,B87
typical_cds_rare	Chr4	46902333	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	D11
typical_cds_rare	Chr4	46902395	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	4	A8,B79,D1,D11
typical_cds_rare	Chr4	46902423	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	3	B107,B66,B98
lof_cds	Chr4	46902849	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	12	A16,A18,A4,B103,B11,B129,B26,B39,B81,C37,C50,C84
typical_cds_rare	Chr4	46902863	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	4	B107,B130,B66,B98
typical_cds_rare	Chr4	46902885	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	4	B107,B66,B98,C76
typical_cds_rare	Chr4	46902889	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	5	B102,B19,B24,C1,C71
typical_cds_rare	Chr4	46902930	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	C1
typical_cds_rare	Chr4	46902966	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	4	B130,B64,C22,C27
typical_cds_rare	Chr4	46902976	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	2	B121,B87
lof_cds	Chr4	46902988	G	GGT	INDEL	2bp_insertion	frameshift_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	2	B50,C76
typical_cds_rare	Chr4	46902988	G	GGT	INDEL	2bp_insertion	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	2	B50,C76
lof_cds	Chr4	46902990	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	17	A21,B103,B121,B20,B28,B41,B56,B58,B66,B96,B98,C10,C3,C32,C50,C68,D2
lof_cds	Chr4	46902997	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	6	B110,C1,C15,C70,C72,C79
lof_cds	Chr4	46902999	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	10	A13,B117,B127,B131,B50,B53,C27,C3,C53,C76
lof_cds	Chr4	46903010	GCT	G	INDEL	2bp_deletion	frameshift_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	17	A13,A6,B117,B127,B128,B131,B16,B5,B50,B53,B7,B75,C27,C3,C53,C76,C80
typical_cds_rare	Chr4	46903020	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	B131
typical_cds_rare	Chr4	46903049	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	C45
typical_cds_rare	Chr4	46903054	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	5	B125,B90,B91,B92,C57
typical_cds_rare	Chr4	46903066	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	2	B107,B98
lof_cds	Chr4	46903103	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	C45
typical_cds_rare	Chr4	46903103	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	C45
typical_cds_rare	Chr4	46903107	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	3	A8,B79,D1
typical_cds_rare	Chr4	46903111	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	2	A3,B104
typical_cds_rare	Chr4	46903150	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	3	A8,B79,D1
lof_cds	Chr4	46903186	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	66	A16,A4,B1,B101,B103,B106,B109,B110,B112,B118,B13,B137,B138,B32,B38,B39,B40,B46,B53,B54,B58,B60,B63,B64,B65,B66,B70,B85,B86,B9,B90,B91,B92,B93,B97,C1,C13,C15,C2,C3,C32,C36,C37,C44,C48,C50,C51,C52,C55,C60,C62,C64,C66,C68,C70,C72,C79,C80,C82,C83,C86,C9,D10,D11,D3,D8
typical_cds_rare	Chr4	46903189	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	B44
typical_cds_rare	Chr4	46903214	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	B108
lof_cds	Chr4	46903219	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	13	A18,A4,B103,B11,B129,B38,B39,B74,B81,C37,C38,C50,C84
typical_cds_rare	Chr4	46903279	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	4	B10,B101,B109,B132
typical_cds_rare	Chr4	46903309	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	2	B108,C23
typical_cds_rare	Chr4	46903397	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	4	B117,B28,B58,C78
typical_cds_rare	Chr4	46903429	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	4	B112,B137,B30,C12
typical_cds_rare	Chr4	46903663	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	1	C46
typical_cds_rare	Chr4	46903665	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	2	D10,D11
typical_cds_rare	Chr4	46903666	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	3	B28,B58,C78
typical_cds_rare	Chr4	46903687	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	4	B24,C82,D10,D11
typical_cds_rare	Chr4	46903753	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	3	A23,B55,B84
typical_cds_rare	Chr4	46903759	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023524	SmilChr04G003040	131023524	rna-XM_057953068.1	2	B60,C48