source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr4	47378491	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	3	A18,B13,B99
typical_cds_rare	Chr4	47378491	T	TAA	INDEL	2bp_insertion	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	3	A18,B13,B99
lof_cds	Chr4	47378524	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	4	B117,B122,C16,C61
typical_cds_rare	Chr4	47378524	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	4	B117,B122,C16,C61
typical_cds_rare	Chr4	47378532	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	3	B12,B136,C28
typical_cds_rare	Chr4	47378545	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	B69,C72
typical_cds_rare	Chr4	47378549	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	B78
typical_cds_rare	Chr4	47378551	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	3	B117,B122,C16
typical_cds_rare	Chr4	47378589	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	C59
typical_cds_rare	Chr4	47378590	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	5	B42,B43,B52,B60,B77
typical_cds_rare	Chr4	47378595	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	3	A11,B135,C62
typical_cds_rare	Chr4	47378636	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	B79,C48
typical_cds_rare	Chr4	47378659	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	4	B130,B64,B84,C47
typical_cds_rare	Chr4	47378667	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	B69,C69
lof_cds	Chr4	47378673	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	7	B101,B127,B2,B40,C62,C80,D5
typical_cds_rare	Chr4	47378676	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	4	B72,C11,C35,D11
typical_cds_rare	Chr4	47378699	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	3	B110,B24,B43
lof_cds	Chr4	47378703	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	C33,C8
typical_cds_rare	Chr4	47378703	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	C33,C8
typical_cds_rare	Chr4	47378747	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	4	B131,B28,C41,C66
typical_cds_rare	Chr4	47378761	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	B104,B46
typical_cds_rare	Chr4	47378793	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	B79
typical_cds_rare	Chr4	47378799	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	B65,B98
typical_cds_rare	Chr4	47378864	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	5	A24,B108,B11,B49,C51
lof_cds	Chr4	47378964	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	B28
typical_cds_rare	Chr4	47378964	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	B28
typical_cds_rare	Chr4	47379114	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	4	B122,B56,C85,D5
typical_cds_rare	Chr4	47379119	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	5	A21,B1,B108,B78,C75
typical_cds_rare	Chr4	47379128	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	C61,C85
typical_cds_rare	Chr4	47379157	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	B119
typical_cds_rare	Chr4	47379178	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	C37
typical_cds_rare	Chr4	47379192	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	B66
typical_cds_rare	Chr4	47379198	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	5	B139,B14,B45,B51,C46
typical_cds_rare	Chr4	47379199	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	B78
typical_cds_rare	Chr4	47379201	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	B66,C26
typical_cds_rare	Chr4	47379220	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	3	B16,B69,C1
typical_cds_rare	Chr4	47379228	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	3	B48,D6,D7
typical_cds_rare	Chr4	47379261	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	3	A2,B28,D2
typical_cds_rare	Chr4	47379280	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	C45,C61
typical_cds_rare	Chr4	47379284	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	5	B36,B57,C34,C41,C70
typical_cds_rare	Chr4	47379285	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	C3
typical_cds_rare	Chr4	47379294	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	B136
typical_cds_rare	Chr4	47379296	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	5	B22,B32,C23,C35,C65
typical_cds_rare	Chr4	47379311	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	4	A3,B49,B90,C41
typical_cds_rare	Chr4	47379318	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	A9,B102
typical_cds_rare	Chr4	47379321	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	4	B47,B57,B78,C60
typical_cds_rare	Chr4	47379341	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	4	B105,B40,B77,D3
typical_cds_rare	Chr4	47379343	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	5	B125,B50,C4,C5,C86
typical_cds_rare	Chr4	47379357	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	B44
typical_cds_rare	Chr4	47379360	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	C60
typical_cds_rare	Chr4	47379388	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	4	B129,B61,B80,C8
lof_cds	Chr4	47379396	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	45	A13,A18,A21,A23,A5,A6,A8,B101,B106,B109,B112,B133,B24,B27,B34,B46,B66,B67,B74,B79,B81,B93,B96,B98,C11,C19,C25,C29,C31,C35,C37,C46,C48,C49,C55,C64,C67,C69,C71,C74,C85,C86,D2,D3,D9
typical_cds_rare	Chr4	47379400	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	B83
typical_cds_rare	Chr4	47379416	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	B44,B83
typical_cds_rare	Chr4	47379469	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	4	A24,B12,B5,C8
typical_cds_rare	Chr4	47379472	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	B36,C36
lof_cds	Chr4	47379495	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	10	B105,B20,B40,B49,B91,C2,C26,C53,C61,C68
typical_cds_rare	Chr4	47379499	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	B77,D3
lof_cds	Chr4	47379510	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	7	A11,A3,B49,B90,B92,C1,C47
typical_cds_rare	Chr4	47379515	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	3	A9,B30,D10
typical_cds_rare	Chr4	47379518	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	5	A4,B111,B6,B81,C84
typical_cds_rare	Chr4	47379528	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	C5
typical_cds_rare	Chr4	47379533	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	A23,B20
typical_cds_rare	Chr4	47379538	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	C60
typical_cds_rare	Chr4	47379566	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	D11
typical_cds_rare	Chr4	47379567	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	C19
typical_cds_rare	Chr4	47379569	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	B111,C60
lof_cds	Chr4	47379579	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	B75
typical_cds_rare	Chr4	47379579	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	B75
typical_cds_rare	Chr4	47379582	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	3	B44,B63,B80
typical_cds_rare	Chr4	47379584	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	3	B59,C24,D3
lof_cds	Chr4	47379599	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	13	A2,A3,B121,B16,B40,B46,B87,C1,C11,C42,C63,C69,C82
typical_cds_rare	Chr4	47379609	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	4	B125,B50,C5,C86
typical_cds_rare	Chr4	47379648	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	3	B122,B52,C9
typical_cds_rare	Chr4	47379649	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	D10,D7
typical_cds_rare	Chr4	47379655	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	B2,C55
typical_cds_rare	Chr4	47379660	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	C5,C86
typical_cds_rare	Chr4	47379666	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	4	B2,B28,C23,C64
typical_cds_rare	Chr4	47379670	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	5	B100,B125,B53,B7,C28
typical_cds_rare	Chr4	47379673	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	3	A25,B63,C86
typical_cds_rare	Chr4	47379682	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	A9,C10
typical_cds_rare	Chr4	47379793	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	5	B40,B94,C1,C11,C63
lof_cds	Chr4	47379816	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	6	A15,B136,B42,B68,C23,C57
typical_cds_rare	Chr4	47379832	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	B41
typical_cds_rare	Chr4	47379841	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	B48,B68
typical_cds_rare	Chr4	47379874	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	C78
typical_cds_rare	Chr4	47379876	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	B117
typical_cds_rare	Chr4	47380049	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	C7
typical_cds_rare	Chr4	47380101	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	A1
typical_cds_rare	Chr4	47380178	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	3	A19,B97,C55
typical_cds_rare	Chr4	47380193	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	5	B112,C27,C43,C6,C9
typical_cds_rare	Chr4	47380258	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	5	A5,B118,C28,C57,C7
typical_cds_rare	Chr4	47380298	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	B94
typical_cds_rare	Chr4	47380388	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	A21,B20
typical_cds_rare	Chr4	47380472	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	3	B42,B52,B60
typical_cds_rare	Chr4	47380572	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	A1,B21
typical_cds_rare	Chr4	47380594	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	C3
typical_cds_rare	Chr4	47380596	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	C61
typical_cds_rare	Chr4	47380610	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	5	A4,B83,B94,C55,C78
typical_cds_rare	Chr4	47380614	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	4	C32,C36,C38,C44
typical_cds_rare	Chr4	47381083	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	C24,D1
typical_cds_rare	Chr4	47381084	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	A5
typical_cds_rare	Chr4	47381090	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	3	B10,B44,B75
typical_cds_rare	Chr4	47381091	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	1	A24
typical_cds_rare	Chr4	47381095	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	2	B100,B67
lof_cds	Chr4	47381100	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	15	A18,B108,B135,B40,B65,B94,B95,B97,C14,C15,C2,C53,C6,C66,D5
lof_cds	Chr4	47381164	G	GT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	8	A20,B101,B135,B33,B82,C12,C48,C78
lof_cds	Chr4	47381175	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	4	A23,B136,B20,C76
typical_cds_rare	Chr4	47381175	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023528	SmilChr04G003078	131023528	rna-XM_057953073.1	4	A23,B136,B20,C76