source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr4	51003243	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	9	A14,B110,B121,B23,B28,B40,B52,B98,C16
lof_cds	Chr4	51003248	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	55	A15,A22,A25,A7,B104,B109,B11,B111,B112,B113,B114,B122,B123,B124,B129,B13,B138,B16,B34,B35,B42,B43,B46,B47,B49,B64,B68,B71,B74,B8,B81,B84,B88,B91,B95,B99,C10,C13,C21,C26,C4,C41,C43,C61,C64,C72,C73,C74,C75,C86,D10,D2,D5,D6,D7
lof_cds	Chr4	51003255	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	33	A14,A18,A2,A24,B105,B108,B110,B114,B121,B129,B19,B20,B23,B28,B29,B31,B40,B41,B46,B52,B56,B74,B78,B8,B84,B96,B97,B98,C16,C31,C52,C62,C77
lof_cds	Chr4	51003264	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	5	B104,B113,B49,C10,D10
typical_cds_rare	Chr4	51003264	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	5	B104,B113,B49,C10,D10
typical_cds_rare	Chr4	51003286	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	2	B111,C74
lof_cds	Chr4	51003296	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	11	B100,B105,B133,B5,B56,B64,B68,B87,C23,C31,C5
typical_cds_rare	Chr4	51003377	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	3	B119,B95,C65
lof_cds	Chr4	51003504	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	B117
typical_cds_rare	Chr4	51003504	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	B117
typical_cds_rare	Chr4	51003550	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	B27
typical_cds_rare	Chr4	51003568	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	B13
typical_cds_rare	Chr4	51003598	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	B104
typical_cds_rare	Chr4	51003646	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	3	A16,C62,C64
lof_cds	Chr4	51003652	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	2	B84,C82
typical_cds_rare	Chr4	51003652	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	2	B84,C82
typical_cds_rare	Chr4	51003682	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	4	A16,B96,C62,C64
typical_cds_rare	Chr4	51003698	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	4	A16,B96,C62,C64
lof_cds	Chr4	51003707	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	B80
typical_cds_rare	Chr4	51003707	G	GTA	INDEL	2bp_insertion	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	B80
typical_cds_rare	Chr4	51003751	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	2	C60,C86
typical_cds_rare	Chr4	51003760	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	5	A16,B96,C62,C64,C66
typical_cds_rare	Chr4	51003761	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	C71
typical_cds_rare	Chr4	51003770	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	2	B124,B80
lof_cds	Chr4	51003784	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	10	A16,B11,B114,B17,B73,B96,C30,C62,C64,C66
lof_cds	Chr4	51003830	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	2	B91,C44
typical_cds_rare	Chr4	51003830	CAT	C	INDEL	2bp_deletion	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	2	B91,C44
typical_cds_rare	Chr4	51003844	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	2	B54,B80
typical_cds_rare	Chr4	51003929	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	A16
typical_cds_rare	Chr4	51003963	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	D11
typical_cds_rare	Chr4	51004038	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	3	B37,B44,B69
lof_cds	Chr4	51004041	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	69	A14,A15,A2,A21,A25,A6,A8,B102,B105,B11,B112,B114,B118,B134,B135,B136,B139,B140,B16,B17,B18,B20,B23,B24,B26,B3,B30,B53,B56,B58,B67,B68,B69,B70,B73,B76,B81,B88,B90,B91,B92,B95,B96,C12,C13,C14,C18,C21,C22,C25,C30,C37,C38,C39,C4,C40,C41,C45,C47,C55,C6,C63,C7,C72,C74,C8,C86,C87,D2
typical_cds_rare	Chr4	51004087	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	B78
lof_cds	Chr4	51004109	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	3	A2,B119,C25
typical_cds_rare	Chr4	51004109	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	3	A2,B119,C25
lof_cds	Chr4	51004138	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	B139
typical_cds_rare	Chr4	51004138	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	B139
typical_cds_rare	Chr4	51004175	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	4	A11,B128,B7,C61
typical_cds_rare	Chr4	51004305	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	3	B30,B81,C6
lof_cds	Chr4	51004318	TAA	T	INDEL	2bp_deletion	frameshift_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	A4
typical_cds_rare	Chr4	51004318	TAA	T	INDEL	2bp_deletion	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	A4
lof_cds	Chr4	51004323	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	A4
typical_cds_rare	Chr4	51004323	T	TTG	INDEL	2bp_insertion	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	A4
typical_cds_rare	Chr4	51004328	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	A25
typical_cds_rare	Chr4	51004333	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	3	B13,B86,C32
typical_cds_rare	Chr4	51004365	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	2	B13,C32
typical_cds_rare	Chr4	51004376	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	5	A23,B114,B136,D10,D8
typical_cds_rare	Chr4	51004397	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	2	C41,D11
typical_cds_rare	Chr4	51004409	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	C60
typical_cds_rare	Chr4	51004437	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	5	B34,B73,C40,C41,C57
typical_cds_rare	Chr4	51004482	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	2	B110,B40
lof_cds	Chr4	51004487	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	2	C17,C32
typical_cds_rare	Chr4	51004487	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	2	C17,C32
lof_cds	Chr4	51004493	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	15	B117,B119,B14,B25,B3,B39,B45,B51,B82,B89,C25,C28,C37,C73,D4
typical_cds_rare	Chr4	51004494	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	3	A9,C18,C77
typical_cds_rare	Chr4	51004518	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	D10
typical_cds_rare	Chr4	51004529	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	2	C2,C32
typical_cds_rare	Chr4	51004578	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	4	A8,B49,B73,B81
typical_cds_rare	Chr4	51004691	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	3	B11,B75,C31
lof_cds	Chr4	51004723	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	D6
typical_cds_rare	Chr4	51004723	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	D6
lof_cds	Chr4	51004738	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	16	A10,B1,B100,B118,B18,B3,B66,B69,B71,B91,C14,C60,C69,C7,C87,D2
typical_cds_rare	Chr4	51004744	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	4	B11,B14,B75,C31
lof_cds	Chr4	51004773	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	8	B5,B73,B90,C27,C29,C39,C55,D5
typical_cds_rare	Chr4	51004789	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	B101
typical_cds_rare	Chr4	51004801	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	D10
lof_cds	Chr4	51004802	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	6	A19,B102,B126,B27,B85,C58
typical_cds_rare	Chr4	51004816	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	2	B11,B75
typical_cds_rare	Chr4	51004838	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	3	B138,B9,C72
typical_cds_rare	Chr4	51004840	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	3	B121,B25,B64
lof_cds	Chr4	51004849	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	B46
typical_cds_rare	Chr4	51004849	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	B46
typical_cds_rare	Chr4	51004868	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	1	D10
typical_cds_rare	Chr4	51004871	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	4	B82,C29,C48,C5
typical_cds_rare	Chr4	51004914	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020345	SmilChr04G003451	131020345	rna-XM_057949096.1	3	B101,B41,C24