source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr4	51063929	A	AGT	INDEL	2bp_insertion	frameshift_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	45	A1,A13,A14,A16,A23,A7,A8,B100,B107,B11,B120,B125,B138,B139,B18,B21,B25,B27,B30,B35,B45,B5,B50,B51,B54,B59,B7,B8,B86,B94,C18,C23,C26,C35,C4,C58,C60,C63,C70,C77,C83,C86,C87,C9,D9
lof_cds	Chr4	51063932	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	45	A1,A13,A14,A16,A23,A7,A8,B100,B107,B11,B120,B125,B138,B139,B18,B21,B25,B27,B30,B35,B45,B5,B50,B51,B54,B59,B7,B8,B86,B94,C18,C23,C26,C35,C4,C58,C60,C63,C70,C77,C83,C86,C87,C9,D9
typical_cds_rare	Chr4	51063938	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	2	B131,B9
lof_cds	Chr4	51063966	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	20	B104,B109,B113,B121,B130,B20,B26,B41,B44,B47,B48,B52,B53,B59,B6,B63,B76,C16,C67,D10
typical_cds_rare	Chr4	51063999	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	2	B9,C77
typical_cds_rare	Chr4	51064007	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	1	B59
typical_cds_rare	Chr4	51064017	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	2	C24,C9
typical_cds_rare	Chr4	51064041	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	1	B35
typical_cds_rare	Chr4	51064065	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	5	B127,B28,B71,B77,C33
typical_cds_rare	Chr4	51064071	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	5	B135,B5,B64,B83,D10
lof_cds	Chr4	51064076	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	1	A10
typical_cds_rare	Chr4	51064076	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	1	A10
typical_cds_rare	Chr4	51064103	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	1	B2
typical_cds_rare	Chr4	51064148	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	2	B9,C77
lof_cds	Chr4	51064229	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	222	A1,A10,A11,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B111,B112,B113,B114,B115,B117,B118,B119,B12,B120,B121,B122,B124,B125,B126,B127,B128,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B139,B140,B15,B16,B17,B18,B19,B2,B20,B22,B24,B25,B26,B27,B29,B3,B30,B33,B34,B35,B36,B37,B39,B4,B40,B41,B42,B43,B45,B46,B47,B48,B49,B51,B52,B53,B54,B55,B56,B57,B58,B6,B60,B61,B62,B63,B64,B65,B66,B67,B68,B69,B7,B70,B71,B73,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C10,C12,C13,C15,C16,C17,C18,C19,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C33,C34,C35,C36,C37,C38,C39,C41,C43,C44,C45,C46,C47,C48,C5,C51,C52,C53,C54,C55,C56,C57,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C70,C71,C72,C74,C75,C76,C77,C78,C79,C8,C80,C82,C83,C84,C85,C9,D1,D2,D3,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr4	51064238	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	4	B110,B118,B65,C58
typical_cds_rare	Chr4	51064239	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	1	C48
typical_cds_rare	Chr4	51064257	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	2	B9,C77
typical_cds_rare	Chr4	51064263	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	1	B74
lof_cds	Chr4	51064281	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	5	B31,B64,C2,C48,C56
typical_cds_rare	Chr4	51064281	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	5	B31,B64,C2,C48,C56
typical_cds_rare	Chr4	51064310	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	2	A2,C42
lof_cds	Chr4	51064324	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	2	B9,C77
typical_cds_rare	Chr4	51064324	TGC	T	INDEL	2bp_deletion	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	2	B9,C77
lof_cds	Chr4	51064328	C	CCT	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	2	B9,C77
typical_cds_rare	Chr4	51064328	C	CCT	INDEL	2bp_insertion	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	2	B9,C77
typical_cds_rare	Chr4	51064330	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	1	D10
lof_cds	Chr4	51064351	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	1	B120
typical_cds_rare	Chr4	51064351	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	1	B120
lof_cds	Chr4	51064364	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	1	B120
typical_cds_rare	Chr4	51064364	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	1	B120
typical_cds_rare	Chr4	51064366	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	2	B91,D4
typical_cds_rare	Chr4	51064392	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	2	C32,C68
lof_cds	Chr4	51064488	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	8	A7,B109,B112,C63,C65,C72,C82,D3
lof_cds	Chr4	51064503	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	7	A7,B109,B112,C33,C72,C82,D3
lof_cds	Chr4	51064527	GCA	G	INDEL	2bp_deletion	frameshift_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	14	A10,A7,B112,B120,B47,B9,C27,C33,C41,C65,C69,C76,C82,D3
lof_cds	Chr4	51064531	A	AGT	INDEL	2bp_insertion	frameshift_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	14	A10,A7,B112,B120,B47,B9,C27,C33,C41,C65,C69,C76,C82,D3
typical_cds_rare	Chr4	51064551	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	1	C69
typical_cds_rare	Chr4	51064557	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	2	B9,C77
lof_cds	Chr4	51064561	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	27	A13,A23,A25,A8,B107,B113,B125,B138,B18,B21,B27,B31,B35,B45,B5,B8,B86,C23,C26,C35,C4,C47,C63,C83,C87,C9,D9
lof_cds	Chr4	51064575	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	9	A10,A7,B77,C63,C65,C69,C76,C82,D3
typical_cds_rare	Chr4	51064708	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	4	A25,B72,C11,C14
lof_cds	Chr4	51064714	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	5	B125,B6,B91,B99,C76
typical_cds_rare	Chr4	51064714	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	5	B125,B6,B91,B99,C76
lof_cds	Chr4	51064735	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	3	A15,B107,B117
typical_cds_rare	Chr4	51064735	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	3	A15,B107,B117
typical_cds_rare	Chr4	51064737	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	2	B119,B69
typical_cds_rare	Chr4	51064741	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	1	C60
typical_cds_rare	Chr4	51064776	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	1	B76
lof_cds	Chr4	51064825	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	2	B37,B74
typical_cds_rare	Chr4	51064825	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	2	B37,B74
lof_cds	Chr4	51064833	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	1	B115
typical_cds_rare	Chr4	51064833	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	1	B115
typical_cds_rare	Chr4	51064850	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	2	B9,C77
typical_cds_rare	Chr4	51064856	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	2	A24,D7
lof_cds	Chr4	51064917	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	234	A1,A10,A11,A13,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A24,A3,A4,A5,A6,A7,A8,A9,B1,B10,B101,B102,B103,B105,B106,B107,B108,B109,B11,B110,B112,B113,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B128,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B29,B3,B30,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B45,B46,B47,B48,B49,B51,B52,B53,B54,B55,B56,B57,B58,B59,B60,B61,B63,B64,B66,B67,B69,B7,B70,B71,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C40,C41,C43,C44,C45,C46,C47,C48,C5,C50,C51,C52,C53,C54,C55,C56,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C80,C81,C82,C83,C84,C85,C86,C87,C9,D1,D10,D11,D2,D3,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr4	51064953	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	2	B106,C71
typical_cds_rare	Chr4	51064992	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	2	A2,C42
lof_cds	Chr4	51065028	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	239	A1,A10,A11,A13,A14,A15,A16,A18,A19,A2,A20,A21,A22,A24,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B11,B110,B111,B112,B114,B115,B117,B118,B119,B12,B121,B122,B123,B124,B125,B126,B127,B128,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B19,B2,B22,B23,B24,B25,B27,B28,B29,B3,B30,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B45,B47,B49,B5,B50,B51,B53,B54,B55,B56,B57,B58,B6,B61,B62,B63,B64,B65,B66,B67,B68,B69,B70,B71,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B85,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C10,C11,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C37,C38,C39,C4,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C80,C81,C82,C84,C85,C86,C87,C9,D1,D10,D11,D2,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr4	51065157	C	CCG	INDEL	2bp_insertion	frameshift_variant	LOC131023575	SmilChr04G003459	131023575	rna-XM_057953118.1	225	A1,A10,A11,A13,A14,A15,A16,A18,A19,A20,A23,A24,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B111,B112,B113,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B30,B31,B33,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B66,B67,B68,B69,B7,B70,B71,B73,B75,B76,B77,B78,B79,B8,B82,B83,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C10,C12,C13,C14,C15,C16,C17,C18,C19,C20,C21,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C41,C45,C46,C47,C49,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C81,C82,C83,C86,C87,C9,D1,D10,D11,D2,D3,D4,D5,D6,D7,D8,D9