source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr4	53450401	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B102
typical_cds_rare	Chr4	53450469	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	3	A5,B48,C80
lof_cds	Chr4	53450475	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	C54
typical_cds_rare	Chr4	53450475	T	TCA	INDEL	2bp_insertion	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	C54
lof_cds	Chr4	53450477	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	C54
typical_cds_rare	Chr4	53450477	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	C54
typical_cds_rare	Chr4	53450501	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B68
lof_cds	Chr4	53450523	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	2	B126,C61
typical_cds_rare	Chr4	53450523	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	2	B126,C61
lof_cds	Chr4	53450536	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	62	A18,A21,A23,A25,A7,A8,A9,B1,B100,B103,B104,B111,B117,B118,B119,B12,B123,B124,B131,B134,B14,B140,B18,B24,B35,B37,B4,B40,B44,B46,B47,B49,B50,B54,B55,B60,B64,B71,B8,B81,B98,B99,C2,C27,C29,C39,C4,C50,C51,C56,C60,C67,C72,C75,C76,C78,C82,C84,C85,D11,D7,D8
lof_cds	Chr4	53450537	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	2	B36,B82
typical_cds_rare	Chr4	53450537	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	2	B36,B82
lof_cds	Chr4	53450542	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	2	B36,D11
typical_cds_rare	Chr4	53450542	CG	C	INDEL	1bp_deletion	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	2	B36,D11
lof_cds	Chr4	53450646	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	11	B106,B111,B40,B62,B89,C10,C16,C18,C26,C55,C74
typical_cds_rare	Chr4	53450671	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B28
typical_cds_rare	Chr4	53450696	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B64
typical_cds_rare	Chr4	53450734	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B44
typical_cds_rare	Chr4	53450972	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B94
typical_cds_rare	Chr4	53450976	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	C82
typical_cds_rare	Chr4	53450981	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B94
typical_cds_rare	Chr4	53450990	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B94
lof_cds	Chr4	53451002	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	66	A1,A13,A14,A15,A18,A20,A22,A3,B100,B113,B114,B126,B128,B129,B13,B132,B15,B22,B29,B34,B48,B5,B51,B52,B57,B58,B60,B66,B71,B75,B82,B83,B89,B90,B92,B98,B99,C10,C12,C16,C21,C24,C30,C34,C37,C38,C42,C44,C47,C49,C5,C59,C61,C62,C64,C66,C68,C71,C73,C79,C86,C9,D10,D4,D5,D6
lof_cds	Chr4	53451022	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	65	A1,A13,A14,A15,A18,A20,A22,A3,B100,B113,B114,B126,B128,B129,B13,B132,B15,B22,B29,B34,B48,B5,B52,B57,B58,B60,B66,B71,B75,B82,B83,B89,B90,B92,B98,B99,C10,C12,C16,C21,C24,C30,C34,C37,C38,C42,C44,C47,C49,C5,C59,C61,C62,C64,C66,C68,C71,C73,C79,C86,C9,D10,D4,D5,D6
typical_cds_rare	Chr4	53451078	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	2	B4,C14
typical_cds_rare	Chr4	53451170	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B68
typical_cds_rare	Chr4	53451216	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	2	B44,C8
typical_cds_rare	Chr4	53451339	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	2	C11,C69
typical_cds_rare	Chr4	53451353	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	3	B44,C8,D7
typical_cds_rare	Chr4	53451361	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	3	C27,C29,C59
typical_cds_rare	Chr4	53451405	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	D11
typical_cds_rare	Chr4	53451598	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	2	B80,C5
typical_cds_rare	Chr4	53451603	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	D7
typical_cds_rare	Chr4	53451626	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B68
typical_cds_rare	Chr4	53451644	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B5
typical_cds_rare	Chr4	53451659	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	C27
typical_cds_rare	Chr4	53451686	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	3	B110,B65,B68
typical_cds_rare	Chr4	53451887	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	2	B110,B65
typical_cds_rare	Chr4	53451916	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	4	A1,B107,C63,C87
typical_cds_rare	Chr4	53451988	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	3	B113,B41,B7
typical_cds_rare	Chr4	53451997	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	2	B44,C8
lof_cds	Chr4	53452074	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	61	A11,A15,A18,A19,A2,A23,A3,A6,B101,B11,B112,B12,B120,B121,B129,B132,B133,B136,B139,B16,B17,B22,B23,B31,B36,B53,B54,B55,B59,B68,B69,B72,B79,B8,B81,B83,B85,B88,B9,B93,B95,C13,C19,C22,C27,C30,C43,C45,C46,C52,C53,C56,C6,C60,C61,C62,C7,C71,C79,D1,D2
typical_cds_rare	Chr4	53452181	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	2	C29,C59
typical_cds_rare	Chr4	53452182	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	A8
typical_cds_rare	Chr4	53452208	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	2	B80,C5
typical_cds_rare	Chr4	53452319	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	2	B110,B65
typical_cds_rare	Chr4	53452371	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B102
typical_cds_rare	Chr4	53452766	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B65
lof_cds	Chr4	53452836	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	6	B101,B122,B2,C27,C48,C82
typical_cds_rare	Chr4	53452998	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	4	B113,B41,B7,D10
typical_cds_rare	Chr4	53453157	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	5	A3,B111,B46,B89,C18
lof_cds	Chr4	53453277	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	9	A14,A2,B127,B130,B38,B94,C11,C40,C87
typical_cds_rare	Chr4	53453288	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B67
typical_cds_rare	Chr4	53453289	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B67
lof_cds	Chr4	53453332	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B115
typical_cds_rare	Chr4	53453332	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B115
typical_cds_rare	Chr4	53453407	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	C40
typical_cds_rare	Chr4	53453514	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	A11
typical_cds_rare	Chr4	53453636	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	2	C29,C59
typical_cds_rare	Chr4	53453651	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	2	B44,C8
typical_cds_rare	Chr4	53453655	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B104
typical_cds_rare	Chr4	53454365	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	2	B44,C8
lof_cds	Chr4	53454439	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B91
typical_cds_rare	Chr4	53454439	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B91
lof_cds	Chr4	53454442	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B91
typical_cds_rare	Chr4	53454442	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B91
typical_cds_rare	Chr4	53454602	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	2	B110,B65
typical_cds_rare	Chr4	53454742	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	C6
typical_cds_rare	Chr4	53454865	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B72
typical_cds_rare	Chr4	53454920	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	4	B113,B41,B7,D10
typical_cds_rare	Chr4	53454930	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	2	B38,B39
lof_cds	Chr4	53455356	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B104
typical_cds_rare	Chr4	53455356	TTC	T	INDEL	2bp_deletion	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B104
lof_cds	Chr4	53455395	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	19	A19,B100,B11,B132,B139,B22,B36,B55,B69,B72,B8,B87,B93,C14,C43,C6,C7,C71,D1
typical_cds_rare	Chr4	53455433	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	4	A7,B56,B87,C76
typical_cds_rare	Chr4	53455550	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	2	B102,C54
typical_cds_rare	Chr4	53455679	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	5	A15,B126,B132,C47,C61
typical_cds_rare	Chr4	53455705	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	3	C64,C66,C71
typical_cds_rare	Chr4	53455763	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	D7
typical_cds_rare	Chr4	53456126	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	B91
typical_cds_rare	Chr4	53456441	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	C67
typical_cds_rare	Chr4	53457224	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	1	C54
typical_cds_rare	Chr4	53457242	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	4	B42,B44,C54,C8
typical_cds_rare	Chr4	53457415	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020592	SmilChr04G003716	131020592	rna-XM_057949506.1	5	B2,B51,C32,C68,C80