source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr4	54363378	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	2	B106,C77
typical_cds_rare	Chr4	54363379	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	5	A20,B119,C27,C31,C41
typical_cds_rare	Chr4	54363392	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	3	B106,C77,D11
typical_cds_rare	Chr4	54363401	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	4	A18,B33,B99,D7
typical_cds_rare	Chr4	54363455	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	2	B1,C8
typical_cds_rare	Chr4	54363467	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	B83
typical_cds_rare	Chr4	54363479	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	2	C37,D11
typical_cds_rare	Chr4	54363502	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	B83
typical_cds_rare	Chr4	54363506	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	4	B33,B85,B99,D7
typical_cds_rare	Chr4	54363516	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	B83
typical_cds_rare	Chr4	54363541	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	2	B106,C77
typical_cds_rare	Chr4	54363550	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	3	B119,C31,D11
typical_cds_rare	Chr4	54363580	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	5	B129,B30,B83,C5,C61
typical_cds_rare	Chr4	54363583	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	4	B102,B106,B64,C77
lof_cds	Chr4	54363601	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	3	B102,B64,C34
typical_cds_rare	Chr4	54363601	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	3	B102,B64,C34
lof_cds	Chr4	54363690	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	44	A11,A22,A3,B120,B125,B129,B136,B16,B23,B25,B28,B30,B41,B43,B46,B49,B52,B55,B60,B61,B69,B70,B74,B79,B81,B83,B84,B94,B95,B98,C11,C16,C18,C24,C38,C4,C50,C60,C61,C67,C7,C77,C83,D5
typical_cds_rare	Chr4	54363706	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	B65
typical_cds_rare	Chr4	54363721	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	3	B128,B77,C38
typical_cds_rare	Chr4	54363731	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	3	B126,C20,C22
typical_cds_rare	Chr4	54363754	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	3	B40,C40,C53
lof_cds	Chr4	54363770	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	18	A1,A15,A8,B1,B100,B132,B133,B138,B47,B50,B55,C17,C39,C74,D10,D11,D2,D3
typical_cds_rare	Chr4	54363778	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	4	A11,B33,B68,C48
typical_cds_rare	Chr4	54363796	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	4	A11,B33,B68,C48
typical_cds_rare	Chr4	54363809	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	3	B113,B52,C10
lof_cds	Chr4	54363922	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	B60
typical_cds_rare	Chr4	54363922	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	B60
typical_cds_rare	Chr4	54363929	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	3	B106,C77,D11
typical_cds_rare	Chr4	54363930	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	5	B95,C21,C73,C81,C84
typical_cds_rare	Chr4	54363939	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	B79
typical_cds_rare	Chr4	54363975	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	5	A18,B33,B85,B99,D7
typical_cds_rare	Chr4	54364017	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	4	B103,B69,B74,C81
lof_cds	Chr4	54364022	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	11	A15,B100,B104,B132,B50,B55,C17,C39,C67,C74,D10
typical_cds_rare	Chr4	54364045	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	4	A11,B33,B68,C48
lof_cds	Chr4	54364055	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	3	B1,B65,C8
typical_cds_rare	Chr4	54364055	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	3	B1,B65,C8
lof_cds	Chr4	54364064	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	126	A11,A16,A22,A24,A25,A5,A7,A8,B10,B102,B103,B105,B109,B11,B110,B112,B113,B114,B120,B122,B123,B125,B126,B128,B129,B13,B130,B133,B136,B137,B140,B16,B18,B19,B21,B23,B25,B26,B28,B30,B31,B36,B37,B38,B40,B42,B43,B45,B49,B52,B54,B58,B59,B6,B60,B63,B65,B66,B69,B7,B70,B71,B72,B74,B76,B77,B80,B81,B82,B83,B84,B86,B90,B92,B94,B95,B97,C11,C12,C13,C14,C15,C16,C24,C28,C29,C31,C32,C34,C35,C36,C38,C4,C41,C44,C45,C49,C5,C50,C53,C56,C60,C61,C63,C65,C68,C7,C72,C73,C74,C77,C78,C79,C8,C80,C83,C86,C87,D10,D11,D3,D5,D6,D7,D8,D9
typical_cds_rare	Chr4	54364071	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	B104
typical_cds_rare	Chr4	54364092	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	4	A11,B33,B68,C48
typical_cds_rare	Chr4	54364096	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	4	A11,B33,B68,C48
typical_cds_rare	Chr4	54364125	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	C59
typical_cds_rare	Chr4	54364132	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	B46
typical_cds_rare	Chr4	54364142	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	3	B53,C42,C43
typical_cds_rare	Chr4	54364147	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	B66
lof_cds	Chr4	54364156	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	105	A10,A13,A16,A18,A19,A21,A3,B101,B105,B106,B107,B110,B112,B114,B118,B122,B123,B125,B126,B128,B129,B13,B132,B137,B140,B15,B19,B23,B24,B3,B31,B34,B36,B42,B43,B46,B5,B51,B52,B53,B54,B56,B57,B6,B60,B62,B63,B65,B66,B69,B70,B71,B72,B73,B74,B75,B76,B8,B80,B91,B93,B94,B97,C10,C11,C13,C14,C15,C17,C20,C21,C23,C32,C34,C36,C42,C43,C45,C46,C47,C49,C5,C51,C54,C56,C57,C58,C6,C61,C64,C65,C66,C7,C71,C72,C77,C79,C80,C81,C82,C85,C86,C87,D2,D8
lof_cds	Chr4	54364173	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	C86
typical_cds_rare	Chr4	54364173	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	C86
typical_cds_rare	Chr4	54364179	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	4	A11,B33,C48,C77
typical_cds_rare	Chr4	54364207	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	4	A22,B113,B115,C49
typical_cds_rare	Chr4	54364349	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	4	A18,B106,B138,B60
typical_cds_rare	Chr4	54364357	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	4	A11,B33,B68,C48
typical_cds_rare	Chr4	54364360	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	2	C37,D11
lof_cds	Chr4	54364391	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	2	B33,B8
typical_cds_rare	Chr4	54364391	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	2	B33,B8
typical_cds_rare	Chr4	54364397	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	2	C14,C71
typical_cds_rare	Chr4	54364398	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	2	C24,C3
typical_cds_rare	Chr4	54364531	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	D11
typical_cds_rare	Chr4	54364541	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	4	B22,B4,C21,C62
typical_cds_rare	Chr4	54364546	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	2	B1,B65
typical_cds_rare	Chr4	54364549	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	2	A11,B33
typical_cds_rare	Chr4	54364558	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	4	B22,C21,C34,C62
typical_cds_rare	Chr4	54364582	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	B56
typical_cds_rare	Chr4	54364608	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	3	B128,B77,C38
typical_cds_rare	Chr4	54364623	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	4	B140,B51,C67,C84
lof_cds	Chr4	54364657	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	C70
typical_cds_rare	Chr4	54364657	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	C70
lof_cds	Chr4	54364671	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	3	B24,B39,C34
typical_cds_rare	Chr4	54364671	ATC	A	INDEL	2bp_deletion	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	3	B24,B39,C34
typical_cds_rare	Chr4	54364693	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	B33
lof_cds	Chr4	54364705	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	3	B22,B40,C47
typical_cds_rare	Chr4	54364705	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	3	B22,B40,C47
typical_cds_rare	Chr4	54364713	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	A16
typical_cds_rare	Chr4	54364745	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	C82
typical_cds_rare	Chr4	54364747	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	C77
lof_cds	Chr4	54364761	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	2	B24,C34
typical_cds_rare	Chr4	54364761	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	2	B24,C34
typical_cds_rare	Chr4	54364765	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	3	B64,C25,C79
typical_cds_rare	Chr4	54364770	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	2	C39,C9
lof_cds	Chr4	54364789	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	6	B112,B43,B59,C1,C7,C71
typical_cds_rare	Chr4	54364793	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	2	C82,D5
typical_cds_rare	Chr4	54364794	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	B95
typical_cds_rare	Chr4	54364840	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	C48
typical_cds_rare	Chr4	54364860	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	B51
typical_cds_rare	Chr4	54364907	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	3	B37,B59,B93
typical_cds_rare	Chr4	54364908	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131023632	SmilChr04G003826	131023632	rna-XM_057953176.1	1	B140