source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr4	54492524	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B120
typical_cds_rare	Chr4	54492524	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B120
typical_cds_rare	Chr4	54492532	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	D10
typical_cds_rare	Chr4	54492588	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	A15
typical_cds_rare	Chr4	54492620	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	5	B1,B107,B7,C16,C33
typical_cds_rare	Chr4	54492625	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	D11
typical_cds_rare	Chr4	54492807	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B124
typical_cds_rare	Chr4	54492845	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	D10
typical_cds_rare	Chr4	54492931	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	2	B54,D11
typical_cds_rare	Chr4	54492987	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	5	B40,B48,B98,C53,D4
typical_cds_rare	Chr4	54492990	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	3	A22,B35,C47
typical_cds_rare	Chr4	54493017	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B91
typical_cds_rare	Chr4	54493027	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B41
typical_cds_rare	Chr4	54493037	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	4	B128,B59,C18,D1
typical_cds_rare	Chr4	54493043	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	3	B128,C18,D1
lof_cds	Chr4	54493074	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B104
typical_cds_rare	Chr4	54493074	A	ATC	INDEL	2bp_insertion	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B104
lof_cds	Chr4	54493075	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B104
typical_cds_rare	Chr4	54493075	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B104
typical_cds_rare	Chr4	54493150	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	5	B140,B46,B67,C13,C35
typical_cds_rare	Chr4	54493173	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	C46
typical_cds_rare	Chr4	54493209	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B4
typical_cds_rare	Chr4	54493236	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B119
typical_cds_rare	Chr4	54493240	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B4
typical_cds_rare	Chr4	54493387	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	D10
typical_cds_rare	Chr4	54493446	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B124
typical_cds_rare	Chr4	54493453	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B55
typical_cds_rare	Chr4	54493470	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	C82
typical_cds_rare	Chr4	54493553	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B7
lof_cds	Chr4	54493568	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B129
typical_cds_rare	Chr4	54493568	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B129
typical_cds_rare	Chr4	54493598	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	D11
typical_cds_rare	Chr4	54493609	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B124
typical_cds_rare	Chr4	54493658	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B135
typical_cds_rare	Chr4	54493687	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	5	A25,B121,B34,C12,C63
typical_cds_rare	Chr4	54493697	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	5	B108,B118,B61,C15,C61
typical_cds_rare	Chr4	54493726	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	5	B1,B107,B7,C16,C33
typical_cds_rare	Chr4	54493737	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B91
typical_cds_rare	Chr4	54493750	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	D11
typical_cds_rare	Chr4	54493776	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	5	B140,B46,B67,C13,C35
typical_cds_rare	Chr4	54493798	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	D11
typical_cds_rare	Chr4	54493843	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B91
typical_cds_rare	Chr4	54493846	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	D11
typical_cds_rare	Chr4	54493861	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B4
typical_cds_rare	Chr4	54493864	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	5	B11,B27,B38,B94,C10
typical_cds_rare	Chr4	54493915	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B124
lof_cds	Chr4	54493941	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	C47
typical_cds_rare	Chr4	54493941	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	C47
typical_cds_rare	Chr4	54493984	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	2	A7,C23
typical_cds_rare	Chr4	54494010	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	5	B1,B107,B7,C16,C33
typical_cds_rare	Chr4	54494132	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	3	B140,B46,B67
typical_cds_rare	Chr4	54494249	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	3	A7,B106,B62
typical_cds_rare	Chr4	54494258	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	C39
typical_cds_rare	Chr4	54494392	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	2	B104,B95
lof_cds	Chr4	54494418	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	A13
typical_cds_rare	Chr4	54494418	ACC	A	INDEL	2bp_deletion	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	A13
lof_cds	Chr4	54494683	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	40	A2,A9,B11,B12,B124,B126,B131,B132,B134,B136,B138,B2,B22,B37,B4,B43,B5,B50,B55,B7,B75,B76,B77,B83,B85,B90,C16,C2,C20,C27,C31,C40,C47,C49,C58,C71,C76,C85,D11,D5
lof_cds	Chr4	54494685	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	39	A2,A9,B11,B12,B124,B126,B131,B132,B134,B138,B2,B22,B37,B4,B43,B5,B50,B55,B7,B75,B76,B77,B83,B85,B90,C16,C2,C20,C27,C31,C40,C47,C49,C58,C71,C76,C85,D11,D5
lof_cds	Chr4	54494697	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	9	B12,B134,B138,B85,C2,C20,C27,C58,C85
lof_cds	Chr4	54494698	GGC	G	INDEL	2bp_deletion	frameshift_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	27	A2,A9,B11,B124,B126,B131,B132,B2,B37,B4,B43,B50,B7,B75,B76,B77,B90,C16,C3,C40,C47,C49,C64,C71,C76,D11,D5
lof_cds	Chr4	54494703	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	25	A2,A9,B124,B126,B131,B132,B2,B37,B4,B43,B50,B7,B75,B76,B77,B90,C16,C3,C40,C47,C49,C71,C76,D11,D5
lof_cds	Chr4	54494717	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	19	A2,B126,B131,B132,B2,B37,B4,B50,B7,B75,B76,B90,C3,C40,C47,C49,C71,D11,D5
typical_cds_rare	Chr4	54494751	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	C53
typical_cds_rare	Chr4	54494764	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	2	B4,C37
typical_cds_rare	Chr4	54494776	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	2	B104,D11
typical_cds_rare	Chr4	54494782	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B72
typical_cds_rare	Chr4	54494815	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B72
typical_cds_rare	Chr4	54494892	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B55
typical_cds_rare	Chr4	54495031	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	2	B124,D11
typical_cds_rare	Chr4	54495038	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	4	A19,B137,B37,C55
typical_cds_rare	Chr4	54495053	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	4	B1,B49,C85,D7
typical_cds_rare	Chr4	54495131	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	4	B140,B46,B67,C13
typical_cds_rare	Chr4	54495153	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	2	B35,C47
typical_cds_rare	Chr4	54495169	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	4	A19,B137,B37,C55
typical_cds_rare	Chr4	54495178	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	B72
typical_cds_rare	Chr4	54495242	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	5	B35,B4,C24,C36,C47
lof_cds	Chr4	54495403	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	C37
typical_cds_rare	Chr4	54495403	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	C37
lof_cds	Chr4	54495405	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	C37
typical_cds_rare	Chr4	54495405	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	C37
typical_cds_rare	Chr4	54495467	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	1	C51
typical_cds_rare	Chr4	54495481	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020645	SmilChr04G003851	131020645	rna-XM_057949591.1	5	B120,B133,B30,C29,C40