source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr4	55000723	CTA	C	INDEL	2bp_deletion	frameshift_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	29	A20,A8,B101,B104,B107,B108,B118,B134,B2,B27,B31,B44,B61,B62,B64,B77,B87,B95,C22,C29,C33,C34,C40,C75,C76,C85,C9,D11,D8
lof_cds	Chr4	55000728	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	1	B127
typical_cds_rare	Chr4	55000728	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	1	B127
lof_cds	Chr4	55000748	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	1	B24
typical_cds_rare	Chr4	55000748	TTG	T	INDEL	2bp_deletion	CDS_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	1	B24
typical_cds_rare	Chr4	55000754	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	1	B24
lof_cds	Chr4	55000768	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	1	B85
typical_cds_rare	Chr4	55000768	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	1	B85
lof_cds	Chr4	55000858	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1	1	B39
typical_cds_rare	Chr4	55000858	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1	1	B39
typical_cds_rare	Chr4	55008607	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	3	B43,B45,B83
typical_cds_rare	Chr4	55008702	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	5	A18,B104,B45,C8,D11
typical_cds_rare	Chr4	55008968	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	5	A5,B94,C27,C54,C68
lof_cds	Chr4	55008979	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	9	B12,B123,B14,B140,C13,C41,C61,C70,C71
typical_cds_rare	Chr4	55009000	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	1	B4
lof_cds	Chr4	55009054	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	2	B36,C7
typical_cds_rare	Chr4	55009054	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	2	B36,C7
typical_cds_rare	Chr4	55009058	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	2	B119,B35
typical_cds_rare	Chr4	55009071	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	4	B112,C35,C68,C83
typical_cds_rare	Chr4	55009091	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	2	C6,D9
typical_cds_rare	Chr4	55009158	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	1	C52
typical_cds_rare	Chr4	55009383	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	4	A10,C64,C66,C74
typical_cds_rare	Chr4	55009386	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	3	A9,B16,C78
typical_cds_rare	Chr4	55009393	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	1	B68
lof_cds	Chr4	55009434	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949829.1,rna-XM_057949830.1	68	A10,A15,A16,A2,A23,B10,B106,B11,B110,B112,B118,B13,B133,B134,B135,B137,B14,B24,B32,B34,B36,B37,B41,B52,B53,B59,B60,B64,B68,B69,B7,B73,B74,B75,B76,B77,B80,B82,B86,B88,B91,B95,B98,B99,C16,C18,C2,C20,C24,C25,C26,C30,C32,C34,C35,C46,C47,C5,C59,C65,C68,C70,C72,C73,C74,C80,C83,D2
lof_cds	Chr4	55009498	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949830.1	6	A7,B115,B21,C17,C81,D10
lof_cds	Chr4	55009510	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949830.1	4	A7,B115,B21,C81
typical_cds_rare	Chr4	55009510	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949830.1	4	A7,B115,B21,C81
lof_cds	Chr4	55009514	A	AT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949830.1	4	A7,B115,B21,C81
typical_cds_rare	Chr4	55009514	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949830.1	4	A7,B115,B21,C81
lof_cds	Chr4	55009517	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949830.1	4	A7,B115,B21,C81
typical_cds_rare	Chr4	55009517	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131020802	SmilChr04G003938	131020802	rna-XM_057949828.1,rna-XM_057949830.1	4	A7,B115,B21,C81