source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr4	55778238	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949986.1,rna-XM_057949987.1,rna-XM_057949988.1	120	A13,A14,A2,A23,A4,B101,B103,B106,B109,B11,B111,B115,B121,B122,B123,B124,B131,B132,B133,B135,B137,B138,B15,B19,B20,B23,B24,B25,B28,B29,B3,B33,B37,B38,B39,B41,B42,B43,B45,B46,B49,B5,B50,B51,B52,B53,B55,B57,B58,B60,B62,B65,B67,B71,B73,B74,B75,B8,B81,B83,B84,B85,B86,B93,B94,B95,B97,B99,C1,C11,C12,C15,C16,C17,C20,C21,C22,C26,C27,C29,C31,C34,C35,C36,C38,C39,C4,C40,C41,C43,C44,C46,C48,C50,C51,C52,C56,C57,C58,C60,C61,C63,C64,C65,C66,C68,C69,C70,C71,C73,C8,C80,C82,C83,C84,C86,D10,D11,D4,D7
lof_cds	Chr4	55778240	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949986.1,rna-XM_057949987.1,rna-XM_057949988.1	8	A21,B138,B140,B27,B35,B79,C33,D1
lof_cds	Chr4	55778245	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949986.1,rna-XM_057949987.1,rna-XM_057949988.1	44	A1,A15,B102,B109,B11,B112,B121,B123,B125,B130,B139,B14,B22,B27,B34,B44,B5,B70,B78,B90,B91,B92,B95,C11,C12,C13,C15,C26,C28,C30,C48,C49,C5,C51,C53,C56,C69,C7,C73,C76,C79,C87,D5,D8
lof_cds	Chr4	55778279	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949986.1,rna-XM_057949987.1,rna-XM_057949988.1	48	A1,A15,B109,B110,B112,B113,B121,B125,B139,B22,B23,B27,B34,B44,B70,B71,B78,B82,B90,B91,B92,B95,C12,C15,C26,C27,C28,C3,C30,C33,C44,C45,C48,C5,C51,C53,C54,C56,C6,C65,C67,C7,C73,C79,C87,D3,D5,D9
lof_cds	Chr4	55778303	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949986.1,rna-XM_057949987.1,rna-XM_057949988.1	2	A18,B55
typical_cds_rare	Chr4	55778303	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949986.1,rna-XM_057949987.1,rna-XM_057949988.1	2	A18,B55
lof_cds	Chr4	55778334	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949986.1,rna-XM_057949987.1,rna-XM_057949988.1	7	A24,A3,B14,B32,B4,B46,B47
typical_cds_rare	Chr4	55778374	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949986.1,rna-XM_057949987.1,rna-XM_057949988.1	2	B2,C4
typical_cds_rare	Chr4	55778461	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949986.1,rna-XM_057949987.1,rna-XM_057949988.1	2	B26,B63
typical_cds_rare	Chr4	55778493	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949986.1,rna-XM_057949987.1,rna-XM_057949988.1	4	B110,B71,B92,C45
lof_cds	Chr4	55778568	T	TGC	INDEL	2bp_insertion	frameshift_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949986.1,rna-XM_057949987.1,rna-XM_057949988.1	32	A21,A7,B10,B12,B121,B13,B17,B19,B26,B30,B47,B59,B67,B69,B86,C11,C19,C21,C24,C31,C42,C43,C48,C56,C59,C62,C71,C74,C78,C81,C83,D1
typical_cds_rare	Chr4	55778572	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949986.1,rna-XM_057949987.1,rna-XM_057949988.1	4	C38,C59,C63,C84
typical_cds_rare	Chr4	55778578	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949986.1,rna-XM_057949987.1,rna-XM_057949988.1	2	A18,B99
typical_cds_rare	Chr4	55778582	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949986.1,rna-XM_057949987.1,rna-XM_057949988.1	1	C39
typical_cds_rare	Chr4	55778693	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949986.1,rna-XM_057949987.1,rna-XM_057949988.1	1	B114
typical_cds_rare	Chr4	55778698	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949986.1,rna-XM_057949987.1,rna-XM_057949988.1	1	D11
typical_cds_rare	Chr4	55778817	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949986.1,rna-XM_057949987.1,rna-XM_057949988.1	1	B114
typical_cds_rare	Chr4	55778845	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949986.1,rna-XM_057949987.1,rna-XM_057949988.1	1	B100
typical_cds_rare	Chr4	55778962	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949986.1,rna-XM_057949987.1,rna-XM_057949988.1	2	A18,C33
typical_cds_rare	Chr4	55778983	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949986.1,rna-XM_057949987.1,rna-XM_057949988.1	1	C14
typical_cds_rare	Chr4	55779017	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949986.1,rna-XM_057949987.1,rna-XM_057949988.1	2	B122,B22
lof_cds	Chr4	55779247	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949987.1	3	A18,B99,D2
typical_cds_rare	Chr4	55779247	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949987.1	3	A18,B99,D2
lof_cds	Chr4	55779249	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949987.1	3	A18,B99,D2
typical_cds_rare	Chr4	55779249	ATG	A	INDEL	2bp_deletion	CDS_variant	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949987.1	3	A18,B99,D2
lof_cds	Chr4	55779251	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131020936	SmilChr04G004065	131020936	rna-XM_057949987.1	132	A10,A11,A13,A16,A19,A20,A21,A22,A4,A5,A8,B100,B103,B105,B107,B108,B11,B110,B111,B113,B114,B115,B117,B122,B126,B127,B128,B130,B132,B136,B137,B138,B14,B16,B18,B2,B22,B23,B24,B25,B26,B27,B30,B31,B32,B33,B35,B36,B4,B40,B42,B43,B45,B46,B48,B49,B52,B53,B54,B56,B58,B59,B61,B62,B63,B65,B67,B71,B72,B73,B75,B77,B78,B79,B84,B87,B92,B94,B96,B97,C10,C13,C14,C16,C17,C18,C2,C20,C21,C22,C23,C24,C25,C27,C32,C39,C41,C44,C45,C46,C47,C49,C50,C55,C58,C59,C6,C60,C61,C63,C64,C65,C66,C67,C68,C7,C72,C75,C76,C77,C81,C83,C9,D1,D11,D3,D4,D5,D6,D7,D8,D9