source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr5	65080	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	86	A10,A13,A18,A22,A3,A5,B101,B106,B108,B109,B113,B114,B123,B127,B128,B130,B135,B136,B18,B22,B24,B26,B30,B33,B34,B42,B43,B47,B48,B50,B52,B53,B54,B55,B58,B60,B61,B62,B64,B66,B69,B71,B72,B78,B79,B8,B82,B83,B85,B88,B97,B99,C1,C13,C17,C18,C19,C20,C21,C22,C27,C3,C30,C31,C33,C34,C37,C4,C44,C50,C51,C54,C56,C58,C62,C64,C66,C75,C76,C80,C84,D11,D2,D4,D6,D9
typical_cds_rare	Chr5	65141	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	2	B58,C86
lof_cds	Chr5	65340	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	13	A20,B117,B137,B138,B4,B44,B56,B65,B94,C28,C29,C57,D10
lof_cds	Chr5	65341	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	56	A10,A13,A15,A22,A3,B10,B108,B109,B127,B128,B130,B135,B136,B22,B26,B33,B43,B47,B52,B53,B56,B58,B60,B69,B72,B74,B78,B79,B8,B82,B83,B85,B9,B97,C11,C21,C22,C27,C3,C34,C37,C41,C44,C50,C51,C54,C56,C58,C64,C66,C76,C84,D11,D2,D6,D9
lof_cds	Chr5	65350	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	6	B109,B128,B85,C4,C81,D2
typical_cds_rare	Chr5	65354	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	2	B78,C55
lof_cds	Chr5	65356	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	1	B52
typical_cds_rare	Chr5	65356	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	1	B52
lof_cds	Chr5	65360	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	1	B52
typical_cds_rare	Chr5	65360	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	1	B52
lof_cds	Chr5	65420	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	7	B18,C17,C19,C31,C4,C62,D4
typical_cds_rare	Chr5	65538	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	3	B104,C12,C83
typical_cds_rare	Chr5	65539	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	1	B13
lof_cds	Chr5	65572	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	94	A10,A13,A15,A18,A2,A22,A3,A5,A8,B10,B100,B101,B106,B108,B109,B114,B123,B127,B128,B13,B130,B135,B136,B140,B22,B24,B26,B30,B31,B33,B34,B43,B47,B48,B50,B52,B53,B54,B55,B56,B58,B60,B62,B64,B66,B69,B72,B74,B78,B79,B8,B82,B83,B88,B9,B93,B95,B96,B97,B99,C10,C11,C13,C18,C21,C22,C27,C3,C30,C33,C34,C37,C41,C44,C51,C54,C55,C56,C58,C64,C66,C69,C75,C76,C80,C81,C84,C9,D2,D4,D6,D7,D8,D9
lof_cds	Chr5	65575	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	94	A10,A13,A15,A18,A2,A22,A3,A5,A8,B10,B100,B101,B106,B108,B109,B114,B123,B127,B128,B13,B130,B135,B136,B140,B22,B24,B26,B30,B31,B33,B34,B43,B47,B48,B50,B52,B53,B54,B55,B56,B58,B60,B62,B64,B66,B69,B72,B74,B78,B79,B8,B82,B83,B88,B9,B93,B95,B96,B97,B99,C10,C11,C13,C18,C21,C22,C27,C3,C30,C33,C34,C37,C41,C44,C51,C54,C55,C56,C58,C64,C66,C69,C75,C76,C80,C81,C84,C9,D2,D4,D6,D7,D8,D9
lof_cds	Chr5	65581	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	35	A15,A19,A20,A25,B102,B105,B11,B117,B125,B133,B136,B137,B138,B16,B2,B29,B4,B44,B56,B61,B65,B70,B77,B86,B89,B94,C28,C29,C52,C53,C55,C56,C57,C81,D10
lof_cds	Chr5	65689	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	33	A15,A25,B102,B105,B11,B117,B125,B133,B136,B137,B138,B16,B2,B29,B4,B56,B61,B65,B70,B77,B86,B89,B94,B96,C28,C29,C3,C52,C53,C55,C56,C57,D10
typical_cds_rare	Chr5	65694	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	3	B131,B67,C60
lof_cds	Chr5	65718	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	105	A1,A10,A13,A16,A19,A21,A22,A23,A25,A3,A9,B101,B103,B104,B107,B113,B115,B118,B12,B120,B124,B126,B13,B130,B132,B134,B135,B136,B137,B138,B17,B2,B20,B27,B29,B3,B32,B34,B36,B39,B41,B43,B44,B55,B59,B6,B60,B66,B70,B71,B73,B74,B77,B79,B81,B91,B92,B94,B96,C10,C12,C13,C15,C16,C17,C19,C21,C22,C24,C28,C29,C32,C33,C36,C37,C38,C45,C5,C54,C56,C59,C60,C63,C64,C65,C67,C69,C70,C73,C74,C76,C77,C78,C79,C81,C82,C83,C84,C85,C86,C87,D1,D11,D2,D4
lof_cds	Chr5	65722	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	76	A1,A10,A13,A16,A19,A21,A23,A6,A9,B101,B103,B104,B107,B113,B115,B118,B12,B120,B124,B126,B132,B134,B135,B137,B17,B20,B27,B3,B32,B34,B36,B39,B41,B43,B44,B59,B6,B71,B73,B74,B76,B81,B91,B92,C12,C13,C15,C16,C17,C19,C24,C32,C36,C38,C45,C5,C59,C60,C63,C65,C67,C70,C73,C74,C76,C77,C78,C79,C81,C82,C83,C84,C85,C86,C87,D1
lof_cds	Chr5	65737	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	12	B108,B109,B128,B26,B66,B79,B85,C22,C44,C64,C66,D2
typical_cds_rare	Chr5	66401	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	2	B108,B122
lof_cds	Chr5	66455	CCT	C	INDEL	2bp_deletion	frameshift_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	17	A20,A25,B11,B133,B138,B4,B44,B56,B61,B70,B77,B86,B94,C28,C29,C52,C57
typical_cds_rare	Chr5	67040	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	2	B13,D11
lof_cds	Chr5	67046	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	105	A15,A18,A19,A2,A20,A25,A3,A5,A8,B10,B100,B102,B105,B106,B108,B109,B11,B113,B117,B123,B125,B127,B128,B13,B133,B136,B137,B140,B16,B18,B2,B22,B24,B26,B30,B31,B33,B4,B42,B43,B44,B48,B50,B52,B53,B56,B60,B61,B62,B64,B66,B70,B71,B72,B74,B77,B78,B79,B8,B85,B86,B88,B89,B9,B91,B93,B94,B95,B96,B99,C1,C10,C11,C13,C17,C18,C19,C21,C27,C28,C29,C3,C30,C31,C33,C37,C41,C44,C52,C53,C54,C55,C56,C58,C62,C64,C66,C69,C81,D10,D11,D2,D6,D7,D8
lof_cds	Chr5	67443	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	89	A10,A13,A15,A18,A20,A22,A25,A3,A5,A8,B10,B100,B105,B108,B113,B114,B123,B127,B128,B130,B133,B136,B16,B2,B22,B24,B30,B33,B4,B43,B48,B50,B52,B53,B55,B58,B60,B61,B64,B65,B66,B71,B72,B78,B79,B8,B82,B83,B85,B86,B88,B89,B9,B91,B94,B95,B96,B97,B99,C1,C17,C19,C20,C27,C3,C30,C31,C34,C37,C41,C44,C52,C53,C54,C55,C56,C58,C62,C64,C66,C76,C80,C81,C9,D10,D11,D4,D8,D9
lof_cds	Chr5	67472	A	AAC	INDEL	2bp_insertion	frameshift_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	73	A10,A20,A22,A25,A3,A5,B10,B100,B105,B108,B113,B114,B123,B127,B128,B130,B133,B136,B2,B22,B30,B43,B47,B48,B50,B52,B53,B55,B58,B60,B61,B64,B65,B66,B71,B72,B78,B79,B8,B82,B83,B85,B86,B88,B9,B94,B96,B97,B99,C1,C17,C19,C20,C27,C30,C31,C34,C37,C41,C44,C53,C54,C55,C58,C62,C76,C80,C81,C9,D10,D11,D4,D9
typical_cds_rare	Chr5	67605	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	5	A2,B112,B2,C70,C8
typical_cds_rare	Chr5	67644	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	1	A16
typical_cds_rare	Chr5	67645	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	5	B89,C32,C68,C78,C87
typical_cds_rare	Chr5	67656	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	3	B121,B58,C86
typical_cds_rare	Chr5	67697	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	1	B33
lof_cds	Chr5	67736	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	113	A10,A13,A15,A18,A19,A20,A22,A25,A3,A5,B10,B100,B101,B105,B106,B108,B109,B11,B114,B117,B123,B128,B130,B133,B135,B136,B137,B138,B140,B16,B2,B22,B24,B29,B30,B31,B33,B4,B42,B43,B44,B48,B52,B53,B54,B56,B60,B61,B64,B66,B69,B71,B72,B74,B77,B78,B8,B82,B83,B85,B86,B88,B89,B9,B91,B93,B94,B95,B96,B97,B99,C1,C10,C11,C13,C17,C18,C19,C20,C21,C22,C27,C28,C29,C3,C30,C31,C34,C37,C41,C51,C52,C53,C54,C55,C56,C57,C58,C62,C64,C66,C69,C75,C80,C81,C84,D10,D11,D2,D6,D7,D8,D9
lof_cds	Chr5	67737	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	106	A10,A13,A15,A19,A20,A22,A25,A3,A5,B10,B100,B101,B105,B106,B108,B109,B11,B114,B117,B123,B128,B130,B133,B135,B136,B138,B140,B16,B22,B24,B29,B30,B31,B33,B4,B42,B43,B44,B48,B52,B53,B54,B56,B60,B61,B64,B66,B69,B71,B72,B74,B77,B78,B8,B82,B83,B85,B86,B88,B89,B91,B93,B94,B95,B96,B97,B99,C1,C10,C11,C13,C17,C18,C19,C20,C21,C22,C27,C28,C29,C3,C31,C34,C37,C41,C51,C52,C53,C54,C55,C56,C57,C58,C62,C64,C66,C69,C80,C81,C84,D10,D2,D6,D7,D8,D9
typical_cds_rare	Chr5	67769	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	3	B121,B58,C86
lof_cds	Chr5	67776	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC131026502	SmilChr05G000015	131026502	rna-XM_057956375.1	54	A18,A2,A3,A4,A8,B10,B100,B108,B112,B122,B125,B13,B130,B137,B140,B2,B20,B26,B31,B35,B38,B39,B56,B59,B60,B75,B77,B79,B80,B9,B90,B92,B93,B95,B96,B98,C10,C11,C13,C20,C23,C30,C41,C42,C43,C48,C69,C70,C74,C75,C8,C9,D11,D7