source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr5	378439	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	2	A19,A23
typical_cds_rare	Chr5	378548	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	4	B30,B56,B96,C8
typical_cds_rare	Chr5	378619	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	1	B32
lof_cds	Chr5	378622	GGT	G	INDEL	2bp_deletion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	1	B32
typical_cds_rare	Chr5	378622	GGT	G	INDEL	2bp_deletion	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	1	B32
lof_cds	Chr5	378641	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	1	B63
typical_cds_rare	Chr5	378641	TTC	T	INDEL	2bp_deletion	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	1	B63
typical_cds_rare	Chr5	378656	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	5	A14,B12,B62,C70,D8
lof_cds	Chr5	378721	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	1	A6
typical_cds_rare	Chr5	378721	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	1	A6
lof_cds	Chr5	378746	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	13	A15,B120,B123,B33,B72,C16,C2,C27,C40,C47,D1,D2,D3
lof_cds	Chr5	378748	A	ATG	INDEL	2bp_insertion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	13	A15,B120,B123,B33,B72,C16,C2,C27,C40,C47,D1,D2,D3
typical_cds_rare	Chr5	378792	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	2	B93,C61
typical_cds_rare	Chr5	378802	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	2	A19,A23
typical_cds_rare	Chr5	378814	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	2	B99,C80
lof_cds	Chr5	378832	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	3	B111,B99,C80
typical_cds_rare	Chr5	378832	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	3	B111,B99,C80
typical_cds_rare	Chr5	378903	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	2	C37,C63
typical_cds_rare	Chr5	378956	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	5	C24,C27,C32,C68,C73
typical_cds_rare	Chr5	378974	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	5	A14,B121,B62,C25,D11
typical_cds_rare	Chr5	378985	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	2	B93,C61
typical_cds_rare	Chr5	379109	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	1	B22
typical_cds_rare	Chr5	379136	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	2	B83,C63
typical_cds_rare	Chr5	379156	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	2	A5,B85
typical_cds_rare	Chr5	379178	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	4	B27,B33,B41,C60
typical_cds_rare	Chr5	379187	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	2	A11,B136
typical_cds_rare	Chr5	379188	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	2	B93,C61
typical_cds_rare	Chr5	379194	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	3	A19,B93,C61
lof_cds	Chr5	379217	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	10	B127,B136,B32,B48,B50,B53,B63,B78,C34,D10
lof_cds	Chr5	379232	G	GTC	INDEL	2bp_insertion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	80	A11,A19,A2,A21,A23,A24,A5,A8,B109,B111,B112,B117,B122,B126,B128,B129,B13,B130,B134,B14,B20,B22,B24,B27,B3,B34,B35,B37,B4,B40,B46,B51,B52,B54,B58,B64,B65,B66,B68,B74,B76,B78,B79,B83,B87,B9,B93,B98,B99,C11,C14,C16,C26,C32,C33,C37,C40,C45,C46,C49,C55,C56,C60,C61,C63,C68,C69,C7,C71,C75,C77,C79,C80,C81,C83,C86,D1,D11,D5,D7
lof_cds	Chr5	379233	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	80	A11,A19,A2,A21,A23,A24,A5,A8,B109,B111,B112,B117,B122,B126,B128,B129,B13,B130,B134,B14,B20,B22,B24,B27,B3,B34,B35,B37,B4,B40,B46,B51,B52,B54,B58,B64,B65,B66,B68,B74,B76,B78,B79,B83,B87,B9,B93,B98,B99,C11,C14,C16,C26,C32,C33,C37,C40,C45,C46,C49,C55,C56,C60,C61,C63,C68,C69,C7,C71,C75,C77,C79,C80,C81,C83,C86,D1,D11,D5,D7
lof_cds	Chr5	379247	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	1	B21
typical_cds_rare	Chr5	379247	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	1	B21
lof_cds	Chr5	379310	GTT	G	INDEL	2bp_deletion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	21	A16,B10,B102,B113,B127,B136,B17,B24,B32,B48,B50,B63,C15,C34,C35,C36,C5,C52,C72,D10,D6
lof_cds	Chr5	379336	T	TGG	INDEL	2bp_insertion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	20	A11,A8,B101,B109,B117,B122,B129,B130,B20,B35,B37,B54,B68,B78,B99,C33,C45,C60,D5,D7
lof_cds	Chr5	379361	A	ACT	INDEL	2bp_insertion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	17	A16,B102,B113,B127,B136,B17,B24,B32,B63,B71,C35,C36,C5,C52,C72,D10,D6
lof_cds	Chr5	379362	GCA	G	INDEL	2bp_deletion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	19	A16,B10,B102,B113,B127,B136,B17,B24,B32,B63,C15,C34,C35,C36,C5,C52,C72,D10,D6
lof_cds	Chr5	379399	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	6	A16,B136,B17,B24,B63,C72
lof_cds	Chr5	379402	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	6	A16,B136,B17,B24,B63,C72
typical_cds_rare	Chr5	379412	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	1	B111
typical_cds_rare	Chr5	379414	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	5	B136,B17,B24,C36,C72
lof_cds	Chr5	379453	C	CGT	INDEL	2bp_insertion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	37	A10,A11,A2,A24,B101,B111,B126,B130,B14,B20,B22,B27,B35,B4,B52,B54,B64,B74,B76,B78,B9,B93,C11,C16,C21,C33,C37,C46,C61,C69,C7,C77,C79,C80,C81,C83,D11
lof_cds	Chr5	379454	CCT	C	INDEL	2bp_deletion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	64	A10,A11,A19,A2,A21,A23,A24,A5,A8,B111,B112,B126,B13,B134,B14,B20,B22,B24,B27,B3,B34,B35,B4,B46,B51,B52,B54,B58,B64,B65,B66,B74,B76,B79,B83,B9,B93,B98,C11,C14,C16,C21,C26,C37,C40,C46,C49,C55,C56,C61,C63,C68,C69,C7,C71,C75,C77,C79,C80,C81,C83,C86,D1,D11
lof_cds	Chr5	379472	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	2	A10,C21
typical_cds_rare	Chr5	379472	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	2	A10,C21
typical_cds_rare	Chr5	379475	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	5	B136,C3,C72,C82,D10
typical_cds_rare	Chr5	379493	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	2	B93,C61
typical_cds_rare	Chr5	379505	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	5	B47,B85,C46,C56,C76
lof_cds	Chr5	380386	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	21	A8,B101,B126,B134,B20,B22,B24,B27,B34,B4,B65,B68,B83,B98,C26,C45,C49,C55,C60,C75,C79
typical_cds_rare	Chr5	380429	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	3	B91,C10,C41
typical_cds_rare	Chr5	380445	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	5	A20,B102,B76,C36,C44
typical_cds_rare	Chr5	380451	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	3	B102,B76,C44
typical_cds_rare	Chr5	380457	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	4	A20,B102,C36,C44
typical_cds_rare	Chr5	380460	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	3	B102,B76,C44
typical_cds_rare	Chr5	380483	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	4	B134,B28,B93,C61
typical_cds_rare	Chr5	380536	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	2	B128,C34
typical_cds_rare	Chr5	380547	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	1	B104
typical_cds_rare	Chr5	380557	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	5	A10,B129,B25,C21,C34
typical_cds_rare	Chr5	380566	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	2	A10,C21
lof_cds	Chr5	380702	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	25	A2,A23,A5,B111,B112,B134,B14,B22,B3,B46,B64,B65,B66,B74,B79,B83,B9,C14,C32,C63,C68,C7,C75,C77,D1
lof_cds	Chr5	380747	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	5	A1,A3,B140,B75,C6
typical_cds_rare	Chr5	380747	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	5	A1,A3,B140,B75,C6
lof_cds	Chr5	380749	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	4	A1,A3,B75,C6
typical_cds_rare	Chr5	380749	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	4	A1,A3,B75,C6
typical_cds_rare	Chr5	380799	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	1	B12
typical_cds_rare	Chr5	380829	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	1	B51
typical_cds_rare	Chr5	380830	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	1	B58
typical_cds_rare	Chr5	380860	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	4	B104,B105,C22,C29
typical_cds_rare	Chr5	380866	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	1	B60
typical_cds_rare	Chr5	380870	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	5	B20,B76,C60,D11,D7
typical_cds_rare	Chr5	380877	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	1	D11
lof_cds	Chr5	380882	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	21	A4,B120,B138,B32,B44,B47,B6,B60,B69,B80,B82,B88,C12,C3,C39,C4,C41,C50,C53,C72,D6
lof_cds	Chr5	380887	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	20	A4,B120,B138,B32,B44,B53,B6,B60,B69,B80,B88,B94,C12,C3,C39,C4,C41,C50,C53,D6
lof_cds	Chr5	380901	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	2	B127,C27
typical_cds_rare	Chr5	380901	G	GC	INDEL	1bp_insertion	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	2	B127,C27
lof_cds	Chr5	380902	G	GCT	INDEL	2bp_insertion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	2	B127,C27
typical_cds_rare	Chr5	380902	G	GCT	INDEL	2bp_insertion	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	2	B127,C27
lof_cds	Chr5	380904	GGT	G	INDEL	2bp_deletion	frameshift_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	2	B127,C27
typical_cds_rare	Chr5	380904	GGT	G	INDEL	2bp_deletion	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	2	B127,C27
typical_cds_rare	Chr5	380917	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026556	SmilChr05G000075	131026556	rna-XM_057956446.1	5	B47,B85,C46,C56,C76