source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr5	468415	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	207	A11,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B101,B105,B106,B108,B109,B11,B110,B111,B113,B115,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B127,B128,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B14,B15,B16,B18,B19,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B30,B33,B34,B35,B36,B38,B39,B4,B41,B44,B46,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B57,B58,B59,B62,B63,B64,B65,B66,B68,B69,B70,B71,B72,B73,B74,B75,B76,B77,B78,B80,B81,B83,B85,B86,B87,B88,B89,B9,B90,B91,B93,B94,B95,B96,B97,B99,C1,C10,C11,C12,C13,C14,C15,C16,C18,C20,C21,C22,C25,C26,C27,C28,C29,C3,C30,C32,C33,C34,C36,C38,C39,C4,C40,C41,C42,C43,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C60,C61,C62,C63,C64,C65,C68,C71,C72,C73,C74,C75,C77,C78,C79,C80,C84,C85,C86,C87,C9,D1,D10,D11,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr5	468434	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	188	A1,A10,A11,A14,A15,A18,A19,A2,A20,A22,A24,A3,A4,A5,A6,A7,A8,A9,B1,B10,B101,B102,B103,B104,B105,B106,B107,B11,B111,B113,B114,B115,B117,B118,B119,B12,B120,B123,B124,B125,B126,B128,B130,B131,B132,B134,B135,B136,B138,B14,B140,B15,B16,B17,B2,B20,B21,B22,B24,B25,B27,B29,B3,B30,B31,B33,B34,B36,B39,B4,B42,B43,B45,B46,B47,B48,B5,B50,B53,B54,B55,B56,B58,B60,B61,B62,B64,B65,B66,B68,B69,B7,B72,B74,B75,B76,B78,B79,B80,B83,B84,B87,B89,B9,B90,B92,B95,B96,B99,C11,C13,C14,C15,C16,C17,C2,C21,C22,C24,C25,C26,C27,C29,C3,C32,C33,C34,C35,C36,C38,C39,C4,C40,C41,C42,C43,C44,C45,C46,C47,C48,C5,C50,C52,C53,C54,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C71,C72,C73,C74,C76,C77,C78,C79,C8,C80,C81,C83,C84,C85,C87,C9,D1,D11,D2,D3,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr5	468511	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	3	A19,B100,B136
typical_cds_rare	Chr5	468596	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	1	A19
lof_cds	Chr5	468675	GCC	G	INDEL	2bp_deletion	frameshift_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	236	A1,A10,A11,A14,A15,A16,A18,A19,A2,A20,A21,A22,A24,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B101,B102,B103,B104,B105,B106,B109,B11,B110,B111,B113,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B127,B128,B13,B130,B131,B133,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B33,B34,B36,B37,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B50,B52,B53,B54,B55,B56,B57,B58,B60,B61,B62,B63,B65,B66,B68,B69,B70,B71,B73,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B85,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C33,C34,C35,C36,C38,C39,C4,C40,C41,C42,C43,C44,C45,C46,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C76,C77,C78,C79,C8,C80,C81,C82,C83,C84,C85,C86,C87,C9,D1,D10,D11,D2,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr5	468679	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	98	A1,A10,A14,A16,A19,A24,A25,A7,A8,A9,B10,B100,B101,B102,B103,B106,B110,B118,B121,B122,B126,B127,B128,B13,B133,B137,B139,B140,B18,B19,B21,B23,B26,B28,B3,B30,B37,B4,B40,B44,B49,B52,B57,B61,B63,B69,B70,B71,B73,B75,B77,B79,B8,B81,B82,B86,B88,B91,B93,B94,B97,B98,C10,C12,C16,C17,C18,C19,C20,C21,C23,C24,C28,C30,C31,C34,C35,C43,C5,C51,C52,C55,C58,C59,C67,C69,C7,C70,C72,C74,C82,C86,C9,D10,D11,D4,D8,D9
typical_cds_rare	Chr5	468681	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	1	B100
typical_cds_rare	Chr5	468714	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	3	C65,C83,D1
lof_cds	Chr5	468749	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	10	A21,A25,A5,B117,B39,B83,C20,C27,C68,D3
lof_cds	Chr5	468750	CGG	C	INDEL	2bp_deletion	frameshift_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	9	A21,A25,A5,B117,B39,B83,C27,C68,D3
lof_cds	Chr5	468759	G	GAC	INDEL	2bp_insertion	frameshift_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	168	A1,A10,A11,A13,A14,A16,A18,A19,A20,A21,A23,A25,A5,A7,A8,A9,B100,B101,B102,B103,B106,B107,B108,B109,B11,B110,B112,B114,B117,B118,B120,B121,B122,B123,B126,B127,B128,B129,B13,B131,B132,B133,B137,B138,B139,B14,B140,B15,B18,B19,B2,B21,B24,B26,B27,B28,B3,B30,B31,B32,B35,B37,B38,B39,B4,B40,B41,B42,B43,B44,B46,B49,B51,B52,B57,B59,B6,B60,B61,B63,B67,B69,B7,B70,B71,B72,B73,B74,B75,B77,B79,B8,B81,B82,B83,B85,B86,B87,B88,B90,B91,B93,B94,B95,B97,B98,B99,C1,C10,C11,C12,C13,C14,C16,C17,C18,C19,C20,C21,C23,C24,C27,C28,C29,C30,C31,C33,C34,C35,C37,C38,C43,C45,C47,C49,C5,C50,C51,C52,C53,C55,C56,C58,C59,C61,C62,C63,C64,C66,C67,C68,C69,C7,C70,C72,C74,C75,C82,C83,C84,C86,C9,D10,D11,D3,D4,D6,D9
typical_cds_rare	Chr5	468783	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	5	A21,A25,B100,B39,C68
typical_cds_rare	Chr5	468804	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	1	C70
typical_cds_rare	Chr5	468813	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	1	B100
typical_cds_rare	Chr5	468836	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	5	A22,B3,B40,B76,C72
typical_cds_rare	Chr5	468859	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	2	A7,B94
lof_cds	Chr5	468902	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	137	A14,A15,A19,A2,A20,A24,A3,A4,A5,A6,A8,B1,B10,B100,B102,B104,B105,B109,B111,B113,B114,B115,B119,B12,B121,B123,B124,B125,B126,B128,B130,B132,B134,B14,B140,B16,B17,B20,B24,B25,B29,B30,B31,B33,B34,B35,B38,B39,B42,B43,B47,B48,B50,B54,B55,B56,B58,B62,B64,B65,B66,B68,B7,B72,B74,B75,B76,B78,B79,B80,B83,B84,B87,B89,B9,B90,B92,B95,B96,B97,C13,C14,C15,C16,C2,C22,C26,C27,C29,C3,C32,C33,C36,C38,C39,C4,C40,C41,C42,C43,C44,C46,C47,C48,C50,C53,C54,C56,C57,C6,C60,C61,C63,C65,C66,C68,C69,C71,C73,C74,C76,C77,C78,C79,C8,C80,C81,C84,C85,C87,C9,D1,D11,D2,D3,D5,D7
lof_cds	Chr5	468909	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	128	A1,A10,A11,A14,A16,A18,A2,A24,A3,A4,A6,B1,B10,B101,B102,B105,B107,B109,B115,B122,B123,B125,B126,B130,B131,B133,B134,B135,B136,B138,B139,B14,B2,B20,B26,B28,B3,B31,B32,B33,B34,B36,B40,B42,B43,B46,B47,B50,B52,B54,B55,B57,B58,B6,B62,B66,B67,B68,B69,B7,B78,B82,B83,B84,B88,B89,B90,B91,B92,B95,B96,C1,C13,C14,C16,C17,C2,C24,C25,C3,C30,C31,C32,C35,C36,C37,C38,C40,C42,C44,C45,C46,C47,C48,C49,C50,C54,C57,C58,C6,C61,C62,C63,C64,C65,C66,C67,C68,C71,C73,C77,C78,C79,C8,C80,C81,C83,C84,C85,C86,C87,C9,D11,D2,D5,D6,D7,D9
typical_cds_rare	Chr5	468927	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	3	A19,B100,B136
lof_cds	Chr5	469007	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	13	A13,A25,B132,B15,B37,B59,B72,B75,B83,C1,C28,C38,C59
lof_cds	Chr5	469013	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	16	A15,A23,B112,B117,B120,B121,B16,B41,B80,B9,B98,C27,C33,C47,D10,D8
typical_cds_rare	Chr5	469022	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	3	A19,B100,B136
typical_cds_rare	Chr5	469030	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	3	A19,B100,B136
typical_cds_rare	Chr5	469031	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	2	A23,D8
lof_cds	Chr5	469053	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	7	A5,B19,B39,B64,B74,C32,C4
typical_cds_rare	Chr5	469058	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	1	B77
lof_cds	Chr5	469116	GGT	G	INDEL	2bp_deletion	frameshift_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	1	B64
typical_cds_rare	Chr5	469116	GGT	G	INDEL	2bp_deletion	CDS_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	1	B64
lof_cds	Chr5	469131	CTG	C	INDEL	2bp_deletion	frameshift_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	12	A15,B112,B117,B120,B121,B16,B72,B9,C27,C33,D10,D3
lof_cds	Chr5	469133	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	203	A10,A14,A15,A16,A18,A2,A20,A21,A23,A24,A3,A5,A6,A7,A8,A9,B1,B10,B100,B101,B102,B103,B104,B105,B106,B108,B109,B11,B110,B111,B113,B118,B119,B12,B122,B123,B124,B125,B128,B13,B130,B131,B132,B133,B134,B135,B136,B138,B14,B140,B17,B20,B22,B24,B25,B26,B27,B28,B29,B32,B34,B35,B36,B38,B39,B4,B40,B41,B44,B46,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B57,B58,B60,B61,B62,B64,B65,B66,B67,B68,B69,B7,B71,B73,B74,B75,B76,B77,B78,B79,B8,B80,B82,B83,B85,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,C1,C11,C12,C14,C15,C16,C17,C18,C2,C21,C23,C24,C25,C26,C27,C28,C3,C30,C31,C32,C33,C34,C36,C38,C39,C4,C40,C41,C42,C43,C44,C45,C46,C48,C49,C5,C50,C51,C52,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C68,C69,C7,C71,C72,C73,C74,C76,C77,C78,C79,C8,C80,C81,C82,C83,C84,C85,C86,C87,C9,D1,D10,D2,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr5	469134	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	12	A15,B112,B117,B120,B121,B16,B72,B9,C27,C33,D10,D3
lof_cds	Chr5	469150	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	17	A7,B107,B14,B19,B21,B37,B52,B56,B73,B87,B99,C16,C61,C65,C73,C80,C81
lof_cds	Chr5	469153	GCA	G	INDEL	2bp_deletion	frameshift_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	16	A7,B107,B14,B19,B37,B52,B56,B73,B87,B99,C16,C61,C65,C73,C81,D7
typical_cds_rare	Chr5	469158	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	2	A23,D8
typical_cds_rare	Chr5	469160	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	1	C25
typical_cds_rare	Chr5	469194	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026564	SmilChr05G000085	131026564	rna-XM_057956452.1	4	B100,B66,C32,C68