source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr5	1042488	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	1	B33
typical_cds_rare	Chr5	1042493	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	2	B67,D2
typical_cds_rare	Chr5	1042505	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	1	B72
typical_cds_rare	Chr5	1042548	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	2	B49,C61
typical_cds_rare	Chr5	1042549	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	1	A2
typical_cds_rare	Chr5	1042559	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	1	B23
typical_cds_rare	Chr5	1042569	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	1	B50
typical_cds_rare	Chr5	1042590	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	4	B27,B74,C22,C44
typical_cds_rare	Chr5	1042609	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	2	B74,C22
typical_cds_rare	Chr5	1042622	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	2	B74,C22
typical_cds_rare	Chr5	1042632	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	1	C17
typical_cds_rare	Chr5	1042639	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	3	A24,C14,D8
typical_cds_rare	Chr5	1042673	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	1	D10
typical_cds_rare	Chr5	1042722	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	1	B91
typical_cds_rare	Chr5	1042784	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	1	B138
lof_cds	Chr5	1042928	CCA	C	INDEL	2bp_deletion	frameshift_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	9	A1,B105,B118,B5,B76,B80,C32,C7,C81
lof_cds	Chr5	1042957	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	6	A6,B129,B73,C41,C5,C66
typical_cds_rare	Chr5	1042966	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	3	A6,B73,C66
typical_cds_rare	Chr5	1042984	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	4	C28,C48,C57,C67
typical_cds_rare	Chr5	1043035	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	1	B36
lof_cds	Chr5	1043049	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	1	A20
typical_cds_rare	Chr5	1043049	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	1	A20
lof_cds	Chr5	1043094	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	8	A24,B139,B49,B88,C11,C60,C62,C79
lof_cds	Chr5	1043095	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	45	A14,A5,A9,B103,B117,B121,B124,B129,B130,B131,B138,B140,B2,B20,B26,B28,B29,B35,B40,B42,B47,B65,B73,B74,B76,B77,B78,B89,B95,C1,C14,C19,C23,C25,C28,C29,C30,C37,C52,C54,C61,C84,D3,D7,D9
lof_cds	Chr5	1043112	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	14	A16,A7,B112,B115,B117,B125,B34,B5,B90,C24,C39,C43,C71,D2
typical_cds_rare	Chr5	1043124	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	4	A21,B118,B78,B94
lof_cds	Chr5	1043143	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	20	A14,A16,A19,A7,A9,B112,B117,B121,B124,B125,B140,B5,B88,B90,C23,C24,C54,C62,C71,D2
lof_cds	Chr5	1043146	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	17	A14,A16,A7,B112,B117,B121,B124,B125,B140,B5,B88,C23,C24,C54,C62,C71,D2
typical_cds_rare	Chr5	1043196	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	3	C1,C40,D6
typical_cds_rare	Chr5	1043208	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	2	C24,C29
typical_cds_rare	Chr5	1043247	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	1	B10
lof_cds	Chr5	1043253	GAC	G	INDEL	2bp_deletion	frameshift_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	47	A10,A14,A19,A23,A3,A5,A7,A8,B125,B127,B131,B132,B133,B140,B17,B20,B23,B27,B35,B43,B50,B53,B61,B73,B75,B78,B79,C10,C13,C16,C21,C26,C28,C29,C38,C42,C47,C49,C59,C6,C62,C63,C77,C78,C81,C9,D1
lof_cds	Chr5	1043256	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	46	A10,A14,A19,A23,A3,A5,A7,A8,B125,B127,B131,B132,B133,B140,B17,B20,B23,B27,B35,B43,B50,B53,B61,B75,B78,B79,C10,C13,C16,C21,C26,C28,C29,C38,C42,C47,C49,C59,C6,C62,C63,C77,C78,C81,C9,D1
lof_cds	Chr5	1043265	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	1	B47
typical_cds_rare	Chr5	1043265	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	1	B47
lof_cds	Chr5	1043266	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	34	A5,A6,A8,B112,B114,B130,B137,B139,B14,B19,B2,B23,B28,B36,B45,B54,B7,B73,B95,C1,C19,C22,C24,C27,C43,C48,C51,C53,C57,C60,C61,C62,C7,C86
typical_cds_rare	Chr5	1043272	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	3	B112,C24,C43
typical_cds_rare	Chr5	1043292	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	3	B112,C24,C43
typical_cds_rare	Chr5	1043294	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	3	B2,C48,C57
typical_cds_rare	Chr5	1043299	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	1	B47
typical_cds_rare	Chr5	1043301	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026654	SmilChr05G000129	131026654	rna-XM_057956569.1	5	B120,B126,B127,B50,C63