source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr5	1556284	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	3	A5,C12,C68
typical_cds_rare	Chr5	1556322	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	C40,C68
typical_cds_rare	Chr5	1556325	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	C70,C8
typical_cds_rare	Chr5	1556326	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	B107
typical_cds_rare	Chr5	1556327	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	B13,B2
typical_cds_rare	Chr5	1556343	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	3	A20,B90,D2
typical_cds_rare	Chr5	1556347	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	D10
typical_cds_rare	Chr5	1556361	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	3	B107,B2,C15
typical_cds_rare	Chr5	1556363	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	B35,C26
lof_cds	Chr5	1556373	CTA	C	INDEL	2bp_deletion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	5	B30,B34,B95,D1,D9
typical_cds_rare	Chr5	1556373	CTA	C	INDEL	2bp_deletion	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	5	B30,B34,B95,D1,D9
typical_cds_rare	Chr5	1556382	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	B126,B63
typical_cds_rare	Chr5	1556430	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	3	B15,B16,B97
lof_cds	Chr5	1556469	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	10	A16,B138,B18,B31,B35,B97,B98,C20,C5,C61
lof_cds	Chr5	1556474	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	A20
typical_cds_rare	Chr5	1556474	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	A20
lof_cds	Chr5	1556476	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	A20
typical_cds_rare	Chr5	1556476	C	CAA	INDEL	2bp_insertion	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	A20
typical_cds_rare	Chr5	1556478	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	A10,B117
typical_cds_rare	Chr5	1556521	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	5	B33,B7,B79,B90,C48
lof_cds	Chr5	1556540	T	TTA	INDEL	2bp_insertion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	4	B51,B9,B99,C60
typical_cds_rare	Chr5	1556540	T	TTA	INDEL	2bp_insertion	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	4	B51,B9,B99,C60
lof_cds	Chr5	1556543	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	7	A1,B102,B140,B53,C21,C22,C31
lof_cds	Chr5	1556545	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	4	B51,B9,B99,C60
typical_cds_rare	Chr5	1556545	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	4	B51,B9,B99,C60
typical_cds_rare	Chr5	1556566	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	B62,C37
typical_cds_rare	Chr5	1556576	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	B19,C21
lof_cds	Chr5	1556581	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	11	B110,B111,B121,B137,B60,B88,C21,C27,C41,C48,C80
typical_cds_rare	Chr5	1556592	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	5	B14,B62,B87,C37,C42
typical_cds_rare	Chr5	1556649	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	A22
lof_cds	Chr5	1556654	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	B104,B112
typical_cds_rare	Chr5	1556654	TCC	T	INDEL	2bp_deletion	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	B104,B112
typical_cds_rare	Chr5	1556672	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	B104,B112
lof_cds	Chr5	1556673	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	19	B100,B102,B130,B131,B30,B47,B53,B67,C17,C25,C26,C3,C47,C5,C61,C62,C63,C71,C9
typical_cds_rare	Chr5	1556678	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	3	B100,B126,B28
typical_cds_rare	Chr5	1556682	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	3	B126,C40,C7
typical_cds_rare	Chr5	1556689	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	C80,C82
typical_cds_rare	Chr5	1556694	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	5	B102,B104,B112,B91,C53
lof_cds	Chr5	1556701	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	B128,C55
typical_cds_rare	Chr5	1556701	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	B128,C55
typical_cds_rare	Chr5	1556703	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	4	B77,B86,C31,C65
typical_cds_rare	Chr5	1556704	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	4	B104,B131,B5,B87
typical_cds_rare	Chr5	1556715	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	3	B25,C36,C69
lof_cds	Chr5	1556734	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	3	B70,B71,C80
typical_cds_rare	Chr5	1556734	ATT	A	INDEL	2bp_deletion	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	3	B70,B71,C80
lof_cds	Chr5	1556736	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	89	A1,A11,A13,A16,A2,A7,A9,B100,B102,B103,B105,B106,B108,B109,B11,B110,B119,B123,B128,B130,B131,B132,B136,B137,B139,B140,B16,B17,B21,B22,B27,B30,B33,B41,B42,B47,B5,B53,B58,B61,B63,B64,B65,B67,B72,B73,B74,B75,B77,B79,B82,B83,B87,B9,B93,B95,B98,C18,C2,C21,C24,C25,C26,C27,C30,C35,C39,C41,C46,C47,C49,C5,C53,C55,C57,C58,C59,C6,C61,C62,C71,C72,C80,C81,C82,C84,C9,D3,D4
typical_cds_rare	Chr5	1556742	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	C69,D10
typical_cds_rare	Chr5	1556750	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	C8
typical_cds_rare	Chr5	1556755	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	3	B128,B50,C55
typical_cds_rare	Chr5	1556771	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	A23,A3
typical_cds_rare	Chr5	1556798	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	B90,C34
typical_cds_rare	Chr5	1556799	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	B129
typical_cds_rare	Chr5	1556830	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	3	A16,B120,C22
typical_cds_rare	Chr5	1556844	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	C11,C69
lof_cds	Chr5	1556852	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	3	B98,C20,C5
typical_cds_rare	Chr5	1556852	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	3	B98,C20,C5
lof_cds	Chr5	1556860	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	16	A1,B11,B128,B139,B26,B35,B41,B42,B61,B74,B93,C18,C21,C58,C84,D3
lof_cds	Chr5	1556889	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	B128
typical_cds_rare	Chr5	1556889	TGA	T	INDEL	2bp_deletion	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	B128
typical_cds_rare	Chr5	1556892	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	5	A22,B77,B86,C31,C65
typical_cds_rare	Chr5	1556904	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	5	A21,B11,C57,D4,D6
typical_cds_rare	Chr5	1556915	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	4	A20,B33,B35,B92
lof_cds	Chr5	1556934	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	B35
typical_cds_rare	Chr5	1556934	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	B35
lof_cds	Chr5	1556935	T	TCC	INDEL	2bp_insertion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	B35
typical_cds_rare	Chr5	1556935	T	TCC	INDEL	2bp_insertion	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	B35
lof_cds	Chr5	1557021	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	A23,C35
typical_cds_rare	Chr5	1557021	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	A23,C35
typical_cds_rare	Chr5	1557034	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	4	A20,B125,B92,C62
typical_cds_rare	Chr5	1557045	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	3	A6,B77,B83
typical_cds_rare	Chr5	1557060	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	5	A5,A7,A8,A9,C85
typical_cds_rare	Chr5	1557064	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	4	B6,C17,C31,C66
typical_cds_rare	Chr5	1557083	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	5	A16,B30,B54,B98,C24
typical_cds_rare	Chr5	1557091	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	C27
typical_cds_rare	Chr5	1557100	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	4	A7,B46,B67,C78
typical_cds_rare	Chr5	1557121	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	A7,B30
typical_cds_rare	Chr5	1557142	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	3	B44,B52,C64
typical_cds_rare	Chr5	1557171	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	B17,B29
typical_cds_rare	Chr5	1557178	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	B16,B77
lof_cds	Chr5	1557179	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	3	B74,B75,C22
typical_cds_rare	Chr5	1557179	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	3	B74,B75,C22
typical_cds_rare	Chr5	1557183	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	C14
typical_cds_rare	Chr5	1557192	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	C86
typical_cds_rare	Chr5	1557229	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	4	B18,B32,B4,C77
lof_cds	Chr5	1557234	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	B124,C58
typical_cds_rare	Chr5	1557234	A	ATT	INDEL	2bp_insertion	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	B124,C58
lof_cds	Chr5	1557235	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	14	A21,B101,B34,B36,B42,B48,B66,B74,B75,C17,C23,C33,D11,D4
lof_cds	Chr5	1557236	TCG	T	INDEL	2bp_deletion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	13	A21,B101,B34,B36,B42,B48,B66,B74,B75,C17,C33,D11,D4
typical_cds_rare	Chr5	1557240	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	C51
lof_cds	Chr5	1557242	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	D10
typical_cds_rare	Chr5	1557242	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	D10
lof_cds	Chr5	1557245	ACT	A	INDEL	2bp_deletion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	B24,C84
typical_cds_rare	Chr5	1557245	ACT	A	INDEL	2bp_deletion	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	B24,C84
typical_cds_rare	Chr5	1557246	CT	*	INDEL	1bp_deletion	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	B24,C84
lof_cds	Chr5	1557249	T	TCC	INDEL	2bp_insertion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	B24,C84
typical_cds_rare	Chr5	1557249	T	TCC	INDEL	2bp_insertion	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	B24,C84
typical_cds_rare	Chr5	1557268	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	5	B104,C16,C23,C7,D11
lof_cds	Chr5	1557269	T	TCG	INDEL	2bp_insertion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	14	B104,B14,B15,B42,B43,B48,C20,C24,C34,C59,C72,C83,C9,D5
lof_cds	Chr5	1557271	GTA	G	INDEL	2bp_deletion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	14	B104,B14,B15,B42,B43,B48,C20,C24,C34,C59,C72,C83,C9,D5
typical_cds_rare	Chr5	1557300	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	C7
typical_cds_rare	Chr5	1557316	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	2	B29,B60
typical_cds_rare	Chr5	1557318	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	C54
lof_cds	Chr5	1557332	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	3	A4,B121,C21
typical_cds_rare	Chr5	1557332	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	3	A4,B121,C21
typical_cds_rare	Chr5	1557336	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	1	A14
lof_cds	Chr5	1557353	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	3	A4,B121,C21
typical_cds_rare	Chr5	1557353	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131024752	SmilChr05G000196	131024752	rna-XM_057954290.1	3	A4,B121,C21