source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr5	1562159	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	5	B102,C1,C16,C64,C74
typical_cds_rare	Chr5	1562272	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	C62
typical_cds_rare	Chr5	1562285	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	2	C47,C81
typical_cds_rare	Chr5	1562317	AG	*	INDEL	1bp_deletion	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	B30,B39,B41
typical_cds_rare	Chr5	1562529	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	2	B108,B68
typical_cds_rare	Chr5	1562533	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	A4,B31,B55
typical_cds_rare	Chr5	1563683	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	B140
lof_cds	Chr5	1563823	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	14	B3,B30,B34,B38,B39,B41,B54,C24,C55,C56,C75,C83,D1,D9
typical_cds_rare	Chr5	1563885	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	C8
typical_cds_rare	Chr5	1563904	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	2	A22,C16
typical_cds_rare	Chr5	1563939	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	4	B46,B7,C3,C56
lof_cds	Chr5	1563965	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	B110
typical_cds_rare	Chr5	1563965	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	B110
typical_cds_rare	Chr5	1563966	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	5	B48,B75,C11,C62,C69
typical_cds_rare	Chr5	1563991	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	B20,B62,C66
typical_cds_rare	Chr5	1564033	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	4	B20,B56,B62,C66
typical_cds_rare	Chr5	1564040	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	4	B10,B115,B60,D6
lof_cds	Chr5	1564043	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	7	B106,B111,B36,B93,C17,D10,D3
lof_cds	Chr5	1564044	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	7	B106,B111,B36,B93,C17,D10,D3
typical_cds_rare	Chr5	1564059	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	4	B10,B115,B60,D6
typical_cds_rare	Chr5	1564165	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	B121,B94,C17
typical_cds_rare	Chr5	1564188	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	4	B17,B32,B79,C51
typical_cds_rare	Chr5	1564192	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	5	A7,B112,B140,B76,C39
typical_cds_rare	Chr5	1564225	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	5	A16,B31,B42,B48,C77
lof_cds	Chr5	1564226	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	5	B20,B56,C44,C62,C66
typical_cds_rare	Chr5	1564226	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	5	B20,B56,C44,C62,C66
typical_cds_rare	Chr5	1564227	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	C12,C15,C47
lof_cds	Chr5	1564228	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	2	B101,C65
typical_cds_rare	Chr5	1564228	C	CAT	INDEL	2bp_insertion	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	2	B101,C65
typical_cds_rare	Chr5	1564229	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	B17,B32,B79
typical_cds_rare	Chr5	1564263	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	D5
typical_cds_rare	Chr5	1564278	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	4	A7,B112,C39,C74
typical_cds_rare	Chr5	1564282	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	A7,B112,C39
typical_cds_rare	Chr5	1564296	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	2	A7,C39
typical_cds_rare	Chr5	1564301	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	2	C4,C51
lof_cds	Chr5	1564313	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	D2
typical_cds_rare	Chr5	1564313	T	TAA	INDEL	2bp_insertion	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	D2
lof_cds	Chr5	1564335	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	5	B102,B104,C41,C51,C71
typical_cds_rare	Chr5	1564335	ATC	A	INDEL	2bp_deletion	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	5	B102,B104,C41,C51,C71
lof_cds	Chr5	1564338	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	5	B102,B104,C41,C51,C71
typical_cds_rare	Chr5	1564338	C	CTT	INDEL	2bp_insertion	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	5	B102,B104,C41,C51,C71
typical_cds_rare	Chr5	1564340	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	4	B82,B96,C60,C84
typical_cds_rare	Chr5	1564346	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	B55
lof_cds	Chr5	1564354	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	B121,C64,C73
typical_cds_rare	Chr5	1564354	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	B121,C64,C73
typical_cds_rare	Chr5	1564382	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	B102,B104,C51
lof_cds	Chr5	1564384	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	37	A13,A4,A5,A7,B1,B110,B114,B115,B119,B121,B130,B139,B14,B22,B30,B38,B39,B4,B42,B48,B49,B5,B59,B73,B74,B75,C30,C34,C36,C43,C80,C81,C82,D10,D5,D6,D7
typical_cds_rare	Chr5	1564398	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	B102,B104,C51
typical_cds_rare	Chr5	1564403	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	C54
typical_cds_rare	Chr5	1564407	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	B102,B104,C51
typical_cds_rare	Chr5	1564417	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	B102,B104,C51
typical_cds_rare	Chr5	1564421	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	B102,B104,C51
typical_cds_rare	Chr5	1564437	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	2	B102,B104
typical_cds_rare	Chr5	1564443	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	2	B102,B104
typical_cds_rare	Chr5	1564503	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	2	B119,B74
typical_cds_rare	Chr5	1564507	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	B14
typical_cds_rare	Chr5	1564508	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	2	B35,D3
typical_cds_rare	Chr5	1564521	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	B55
typical_cds_rare	Chr5	1564575	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	D6
typical_cds_rare	Chr5	1564583	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	5	B133,B14,B15,C48,D7
typical_cds_rare	Chr5	1564584	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	C32,C68,D6
typical_cds_rare	Chr5	1564588	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	A4
typical_cds_rare	Chr5	1564620	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	4	B102,B104,B133,C51
typical_cds_rare	Chr5	1564632	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	2	B5,B50
typical_cds_rare	Chr5	1564788	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	2	B129,C26
lof_cds	Chr5	1564792	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	B12,B26,B33
typical_cds_rare	Chr5	1564792	CAT	C	INDEL	2bp_deletion	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	B12,B26,B33
typical_cds_rare	Chr5	1564854	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	2	B20,C62
typical_cds_rare	Chr5	1564927	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	5	B15,B82,C48,C85,D7
typical_cds_rare	Chr5	1564950	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	B20
typical_cds_rare	Chr5	1564962	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	B86,C31,C65
typical_cds_rare	Chr5	1564984	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	C47
lof_cds	Chr5	1565020	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	B131
typical_cds_rare	Chr5	1565020	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	B131
typical_cds_rare	Chr5	1565023	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	2	B15,C26
typical_cds_rare	Chr5	1565067	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	B15,B35,C28
typical_cds_rare	Chr5	1565094	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	B133,B2,C46
typical_cds_rare	Chr5	1565097	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	4	B15,C28,C34,C48
lof_cds	Chr5	1565102	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	B133,B2,C46
typical_cds_rare	Chr5	1565102	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	B133,B2,C46
typical_cds_rare	Chr5	1565108	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	2	C22,C28
typical_cds_rare	Chr5	1565148	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	C42
typical_cds_rare	Chr5	1565240	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	A22
typical_cds_rare	Chr5	1565259	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	5	B101,B14,B15,B91,D10
typical_cds_rare	Chr5	1565268	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	4	A16,B54,B6,C5
typical_cds_rare	Chr5	1565276	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	B49
typical_cds_rare	Chr5	1565283	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	B101,C80,C84
lof_cds	Chr5	1565316	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	6	B14,B15,B82,C34,C48,D10
lof_cds	Chr5	1565321	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	6	B14,B15,B82,C34,C48,D10
lof_cds	Chr5	1565330	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	6	B14,B15,B82,C34,C48,D10
typical_cds_rare	Chr5	1565337	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	5	A11,B77,B86,C31,C65
lof_cds	Chr5	1565342	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	4	B14,C34,C48,D10
typical_cds_rare	Chr5	1565342	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	4	B14,C34,C48,D10
typical_cds_rare	Chr5	1565392	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	C21
typical_cds_rare	Chr5	1565412	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	B133
typical_cds_rare	Chr5	1565425	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	B133
lof_cds	Chr5	1565431	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	B133
typical_cds_rare	Chr5	1565431	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	B133
typical_cds_rare	Chr5	1565460	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	2	C57,D7
lof_cds	Chr5	1565492	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	B123,C13,C22
typical_cds_rare	Chr5	1565492	AGC	A	INDEL	2bp_deletion	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	3	B123,C13,C22
typical_cds_rare	Chr5	1565505	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	4	B56,B76,B96,C16
lof_cds	Chr5	1565530	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	B78
typical_cds_rare	Chr5	1565530	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	B78
lof_cds	Chr5	1565567	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	18	A16,B131,B133,B2,B74,B82,B89,B91,C22,C28,C34,C35,C46,C63,C65,C67,C77,D7
typical_cds_rare	Chr5	1565610	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	2	B51,C63
typical_cds_rare	Chr5	1565653	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	B51
typical_cds_rare	Chr5	1565655	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	2	A21,C23
typical_cds_rare	Chr5	1565680	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	2	A19,D5
typical_cds_rare	Chr5	1565782	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	1	C35
lof_cds	Chr5	1565815	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	4	A11,B123,C85,D11
typical_cds_rare	Chr5	1565815	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026588	SmilChr05G000198	131026588	rna-XM_057956485.1	4	A11,B123,C85,D11