source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr5	1869939	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	1	B13
typical_cds_rare	Chr5	1869940	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	2	B33,C8
typical_cds_rare	Chr5	1869967	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	1	B13
typical_cds_rare	Chr5	1869973	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	3	B13,B56,C74
typical_cds_rare	Chr5	1870066	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	1	D7
lof_cds	Chr5	1870068	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	11	A2,B109,B117,B135,B75,B85,C3,C31,C34,C59,C74
lof_cds	Chr5	1870075	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	12	A2,B109,B117,B135,B75,B85,C11,C3,C31,C34,C59,C74
lof_cds	Chr5	1870077	C	CAG	INDEL	2bp_insertion	frameshift_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	14	A2,B109,B117,B135,B23,B75,B85,C11,C3,C31,C34,C59,C74,D7
typical_cds_rare	Chr5	1870107	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	3	A21,B43,B95
typical_cds_rare	Chr5	1870116	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	1	B114
typical_cds_rare	Chr5	1870136	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	4	B26,B56,C22,C61
typical_cds_rare	Chr5	1870175	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	1	A1
typical_cds_rare	Chr5	1870194	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	5	B114,B13,B24,B48,C65
typical_cds_rare	Chr5	1870214	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	1	D11
typical_cds_rare	Chr5	1870278	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	2	B78,D11
lof_cds	Chr5	1870364	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	27	B11,B122,B123,B128,B134,B140,B17,B18,B2,B34,B44,B45,B61,B67,B81,B84,B90,C20,C27,C44,C47,C49,C61,C77,D11,D4,D6
lof_cds	Chr5	1870369	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	27	B11,B122,B123,B128,B134,B140,B17,B18,B2,B34,B44,B45,B61,B67,B81,B84,B90,C20,C27,C44,C47,C49,C61,C77,C83,D11,D4
typical_cds_rare	Chr5	1870403	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	2	B48,B58
lof_cds	Chr5	1870429	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	10	A25,B109,B120,B132,B15,B35,B52,B58,B94,C2
lof_cds	Chr5	1870433	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	11	A25,B109,B120,B132,B15,B35,B52,B58,B94,C2,C80
typical_cds_rare	Chr5	1870473	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	4	B125,B61,B8,C8
typical_cds_rare	Chr5	1870482	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	4	C11,C20,C26,C69
typical_cds_rare	Chr5	1870617	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	5	B6,B73,B86,C19,C30
typical_cds_rare	Chr5	1870622	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	1	B93
typical_cds_rare	Chr5	1870660	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	1	B19
typical_cds_rare	Chr5	1870664	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	1	B93
lof_cds	Chr5	1870672	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	88	A1,A15,A16,A21,A23,A3,B105,B110,B115,B117,B118,B119,B120,B126,B127,B129,B13,B131,B136,B137,B139,B140,B16,B2,B20,B27,B29,B34,B38,B41,B48,B50,B6,B62,B63,B66,B68,B73,B75,B76,B78,B86,B88,B89,B91,B97,B98,C11,C13,C19,C23,C25,C27,C29,C30,C31,C32,C33,C34,C37,C40,C41,C42,C43,C45,C46,C47,C49,C53,C56,C59,C60,C61,C62,C66,C67,C68,C70,C73,C75,C76,C77,C79,C80,C81,C83,D11,D9
lof_cds	Chr5	1870673	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	88	A1,A15,A16,A21,A23,A3,B105,B110,B115,B117,B118,B119,B120,B126,B127,B129,B13,B131,B136,B137,B139,B140,B16,B2,B20,B27,B29,B34,B38,B41,B48,B50,B6,B62,B63,B66,B68,B73,B75,B76,B78,B86,B88,B89,B91,B97,B98,C11,C13,C19,C23,C25,C27,C29,C30,C31,C32,C33,C34,C37,C40,C41,C42,C43,C45,C46,C47,C49,C53,C56,C59,C60,C61,C62,C66,C67,C68,C70,C73,C75,C76,C77,C79,C80,C81,C83,D11,D9
lof_cds	Chr5	1870750	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	1	B12
typical_cds_rare	Chr5	1870750	AGT	A	INDEL	2bp_deletion	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	1	B12
typical_cds_rare	Chr5	1870777	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	1	B137
typical_cds_rare	Chr5	1870792	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	5	A4,B58,B79,C57,D8
typical_cds_rare	Chr5	1870799	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	1	C1
lof_cds	Chr5	1870824	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	3	A20,B43,B90
typical_cds_rare	Chr5	1870824	TCA	T	INDEL	2bp_deletion	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	3	A20,B43,B90
lof_cds	Chr5	1870825	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	23	B1,B106,B118,B122,B138,B17,B18,B20,B5,B54,B56,B57,B8,B81,B88,B9,B97,C19,C21,C55,C66,C87,D4
lof_cds	Chr5	1870833	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	13	A11,A18,A2,A4,B127,B134,B58,B64,B7,B79,C57,C82,D8
typical_cds_rare	Chr5	1870859	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	3	B38,B39,C13
typical_cds_rare	Chr5	1870881	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	1	C58
typical_cds_rare	Chr5	1870883	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	3	C32,C68,C85
lof_cds	Chr5	1870893	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	1	A15
typical_cds_rare	Chr5	1870893	TG	T	INDEL	1bp_deletion	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	1	A15
lof_cds	Chr5	1870900	TAC	T	INDEL	2bp_deletion	frameshift_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	1	B12
typical_cds_rare	Chr5	1870900	TAC	T	INDEL	2bp_deletion	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	1	B12
lof_cds	Chr5	1870919	GAC	G	INDEL	2bp_deletion	frameshift_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	7	A22,B105,B78,B95,C30,C45,D5
typical_cds_rare	Chr5	1870949	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	4	B1,B23,B79,C45
typical_cds_rare	Chr5	1870962	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	2	B23,B79
lof_cds	Chr5	1870969	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	8	A11,A19,B36,B4,B79,C18,C38,C53
typical_cds_rare	Chr5	1870996	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	2	B23,B79
typical_cds_rare	Chr5	1871020	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	1	A19
typical_cds_rare	Chr5	1871027	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	1	C82
lof_cds	Chr5	1871118	TTA	T	INDEL	2bp_deletion	frameshift_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	2	A9,D3
typical_cds_rare	Chr5	1871118	TTA	T	INDEL	2bp_deletion	CDS_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	2	A9,D3
lof_cds	Chr5	1871120	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC130984964	SmilChr05G000244	130984964	rna-XM_057907666.1	20	A1,B119,B12,B120,B136,B48,B50,B52,B53,B76,B83,B86,B91,C13,C31,C37,C42,C46,C55,C68