source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr5	9563750	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	109	A1,A13,A15,A18,A2,A25,A7,A8,B1,B101,B103,B105,B107,B108,B110,B111,B114,B117,B121,B122,B127,B128,B13,B131,B137,B139,B19,B20,B21,B23,B24,B25,B26,B31,B32,B33,B35,B37,B38,B39,B46,B49,B53,B54,B55,B60,B61,B62,B65,B69,B70,B71,B74,B76,B77,B78,B81,B82,B84,B89,B9,B90,B92,B93,B94,B98,C1,C11,C12,C15,C17,C18,C2,C20,C21,C23,C25,C26,C31,C36,C4,C43,C44,C47,C48,C49,C5,C50,C51,C52,C58,C6,C60,C61,C62,C65,C69,C70,C71,C75,C76,C78,C80,C82,D1,D2,D3,D6,D7
typical_cds_rare	Chr5	9564079	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	3	B111,C19,C58
typical_cds_rare	Chr5	9564223	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	3	B26,B61,B77
typical_cds_rare	Chr5	9564309	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	1	C15
typical_cds_rare	Chr5	9564337	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	1	D10
typical_cds_rare	Chr5	9564411	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	3	B15,B40,B85
typical_cds_rare	Chr5	9564416	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	4	A24,B2,C42,C87
typical_cds_rare	Chr5	9564453	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	2	B35,C13
lof_cds	Chr5	9564476	T	TCG	INDEL	2bp_insertion	frameshift_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	28	A1,A16,A20,B108,B136,B18,B26,B27,B39,B47,B49,B56,B6,B82,B95,B96,C10,C21,C29,C40,C43,C47,C59,C67,C70,D4,D7,D8
lof_cds	Chr5	9564606	C	CCT	INDEL	2bp_insertion	frameshift_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	18	A1,A16,B136,B17,B26,B27,B47,B56,B6,B82,B95,B96,C10,C29,C43,C59,C70,D4
typical_cds_rare	Chr5	9564696	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	1	B55
typical_cds_rare	Chr5	9564721	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	3	B88,C81,C86
lof_cds	Chr5	9564725	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	3	B118,B15,B20
typical_cds_rare	Chr5	9564725	T	TC	INDEL	1bp_insertion	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	3	B118,B15,B20
typical_cds_rare	Chr5	9564728	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	3	B118,B15,B20
typical_cds_rare	Chr5	9565155	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	4	B83,C10,C15,C5
typical_cds_rare	Chr5	9565156	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	1	D10
typical_cds_rare	Chr5	9565219	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	1	D11
typical_cds_rare	Chr5	9565353	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	4	B18,B19,B55,B85
typical_cds_rare	Chr5	9565356	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	1	C53
lof_cds	Chr5	9565526	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	100	A1,A13,A15,A18,A2,A25,A7,A8,B1,B101,B103,B105,B107,B108,B110,B111,B114,B117,B121,B122,B124,B128,B131,B137,B139,B19,B20,B21,B23,B24,B25,B26,B31,B32,B33,B35,B39,B46,B49,B53,B54,B60,B61,B62,B65,B69,B70,B71,B74,B76,B77,B78,B81,B82,B84,B89,B90,B92,B93,B94,B98,C1,C11,C12,C15,C17,C18,C2,C20,C21,C23,C25,C26,C31,C36,C4,C43,C44,C47,C48,C49,C5,C50,C51,C6,C60,C61,C62,C65,C69,C70,C71,C76,C78,C82,D1,D2,D3,D6,D7
lof_cds	Chr5	9565532	GGA	G	INDEL	2bp_deletion	frameshift_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	100	A1,A13,A15,A18,A2,A25,A7,A8,B1,B101,B103,B105,B107,B108,B110,B111,B114,B117,B121,B122,B124,B128,B131,B137,B139,B19,B20,B21,B23,B24,B25,B26,B31,B32,B33,B35,B39,B46,B49,B53,B54,B60,B61,B62,B65,B69,B70,B71,B74,B76,B77,B78,B81,B82,B84,B89,B90,B92,B93,B94,B98,C1,C11,C12,C15,C17,C18,C2,C20,C21,C23,C25,C26,C31,C36,C4,C43,C44,C47,C48,C49,C5,C50,C51,C6,C60,C61,C62,C65,C69,C70,C71,C76,C78,C82,D1,D2,D3,D6,D7
lof_cds	Chr5	9565533	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	1	C35
typical_cds_rare	Chr5	9565533	G	GA	INDEL	1bp_insertion	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	1	C35
lof_cds	Chr5	9565537	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	11	B107,B121,B20,B32,B54,B89,B98,C26,C36,C60,C61
lof_cds	Chr5	9565561	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	4	B109,B34,B44,C77
typical_cds_rare	Chr5	9565561	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	4	B109,B34,B44,C77
typical_cds_rare	Chr5	9565595	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	1	B100
typical_cds_rare	Chr5	9565694	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	5	A21,B66,B85,C77,D1
typical_cds_rare	Chr5	9565753	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	3	B13,B59,C53
lof_cds	Chr5	9565789	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	1	C35
typical_cds_rare	Chr5	9565789	GA	G	INDEL	1bp_deletion	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	1	C35
typical_cds_rare	Chr5	9565944	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	5	A21,B66,B85,C77,D1
typical_cds_rare	Chr5	9565960	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	2	B115,C19
typical_cds_rare	Chr5	9566070	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	2	B5,B57
typical_cds_rare	Chr5	9566083	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	3	B115,C19,C3
lof_cds	Chr5	9566098	GCT	G	INDEL	2bp_deletion	frameshift_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	109	A1,A13,A15,A18,A2,A25,A7,A8,B1,B101,B103,B105,B107,B108,B110,B111,B114,B117,B121,B122,B124,B127,B128,B13,B131,B137,B139,B19,B20,B21,B23,B24,B25,B26,B31,B32,B33,B35,B37,B38,B39,B46,B49,B53,B54,B55,B60,B61,B62,B65,B69,B70,B71,B74,B76,B77,B78,B81,B82,B84,B89,B9,B90,B92,B93,B94,B98,C1,C11,C15,C17,C18,C2,C20,C21,C23,C25,C26,C31,C36,C4,C43,C44,C47,C48,C49,C5,C50,C51,C52,C58,C6,C60,C61,C62,C65,C69,C70,C71,C75,C76,C78,C80,C82,D1,D2,D3,D6,D7
lof_cds	Chr5	9566102	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	109	A1,A13,A15,A18,A2,A25,A7,A8,B1,B101,B103,B105,B107,B108,B110,B111,B114,B117,B121,B122,B124,B127,B128,B13,B131,B137,B139,B19,B20,B21,B23,B24,B25,B26,B31,B32,B33,B35,B37,B38,B39,B46,B49,B53,B54,B55,B60,B61,B62,B65,B69,B70,B71,B74,B76,B77,B78,B81,B82,B84,B89,B9,B90,B92,B93,B94,B98,C1,C11,C15,C17,C18,C2,C20,C21,C23,C25,C26,C31,C36,C4,C43,C44,C47,C48,C49,C5,C50,C51,C52,C58,C6,C60,C61,C62,C65,C69,C70,C71,C75,C76,C78,C80,C82,D1,D2,D3,D6,D7
typical_cds_rare	Chr5	9566135	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	4	B11,B9,C42,C51
typical_cds_rare	Chr5	9566137	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	1	B100
lof_cds	Chr5	9566146	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	109	A1,A13,A15,A18,A2,A25,A7,A8,B1,B101,B103,B105,B107,B108,B110,B111,B114,B117,B121,B122,B124,B127,B128,B13,B131,B137,B139,B19,B20,B21,B23,B24,B25,B26,B31,B32,B33,B35,B37,B38,B39,B46,B49,B53,B54,B55,B60,B61,B62,B65,B69,B70,B71,B74,B76,B77,B78,B81,B82,B84,B89,B9,B90,B92,B93,B94,B98,C1,C11,C15,C17,C18,C2,C20,C21,C23,C25,C26,C31,C36,C4,C43,C44,C47,C48,C49,C5,C50,C51,C52,C58,C6,C60,C61,C62,C65,C69,C70,C71,C75,C76,C78,C80,C82,D1,D2,D3,D6,D7
lof_cds	Chr5	9566190	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	7	B15,B18,B19,B24,B40,B55,B85
typical_cds_rare	Chr5	9566253	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	3	B115,C19,C3
typical_cds_rare	Chr5	9566299	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	3	B100,C53,D11
lof_cds	Chr5	9566435	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	2	A2,C50
typical_cds_rare	Chr5	9566435	TG	T	INDEL	1bp_deletion	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	2	A2,C50
lof_cds	Chr5	9566468	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	199	A1,A10,A11,A13,A14,A15,A16,A19,A2,A20,A21,A22,A23,A24,A3,A4,A5,A6,A7,A8,A9,B1,B100,B102,B103,B104,B105,B106,B107,B108,B109,B11,B112,B113,B114,B115,B117,B118,B119,B12,B123,B126,B127,B128,B129,B130,B131,B132,B133,B134,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B20,B21,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B32,B34,B35,B36,B37,B38,B39,B40,B42,B43,B44,B46,B47,B48,B49,B5,B50,B51,B53,B54,B55,B56,B57,B59,B6,B60,B62,B63,B64,B66,B7,B70,B71,B72,B73,B74,B76,B79,B80,B81,B82,B83,B84,B85,B88,B9,B90,B91,B92,B94,B95,B96,C1,C10,C13,C15,C16,C17,C18,C19,C2,C20,C21,C23,C24,C27,C28,C29,C3,C30,C31,C33,C35,C36,C39,C40,C41,C42,C43,C44,C47,C48,C49,C5,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C62,C63,C64,C65,C66,C67,C7,C70,C71,C72,C73,C74,C75,C76,C77,C79,C8,C80,C81,C83,C85,C86,C87,C9,D1,D11,D2,D3,D4,D7,D8
lof_cds	Chr5	9566475	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	154	A10,A11,A14,A15,A16,A19,A2,A20,A21,A22,A23,A24,A3,A4,A5,A6,A9,B100,B102,B104,B105,B106,B109,B11,B112,B113,B115,B117,B118,B119,B12,B123,B126,B127,B129,B130,B132,B133,B134,B136,B138,B139,B14,B140,B15,B16,B17,B18,B19,B21,B25,B26,B27,B28,B29,B3,B30,B31,B34,B35,B36,B38,B39,B40,B42,B43,B44,B47,B48,B5,B50,B51,B55,B56,B57,B59,B6,B60,B62,B63,B64,B66,B7,B70,B72,B73,B76,B79,B80,B81,B82,B83,B85,B88,B9,B90,B91,B92,B95,B96,C10,C13,C16,C17,C19,C2,C24,C27,C28,C29,C3,C30,C31,C33,C35,C36,C39,C40,C41,C42,C47,C50,C52,C53,C54,C55,C56,C57,C58,C59,C6,C63,C64,C66,C67,C7,C72,C73,C74,C75,C77,C79,C8,C81,C83,C85,C86,C87,C9,D11,D3,D4,D7,D8
lof_cds	Chr5	9566515	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	19	A14,A16,A2,A24,A25,B127,B19,B31,B36,B57,B66,B73,B89,B90,B92,C26,C40,C76,D3
lof_cds	Chr5	9566542	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	20	A19,B103,B106,B127,B128,B138,B16,B37,B51,B73,B79,B91,C15,C16,C27,C31,C39,C49,C54,C57
typical_cds_rare	Chr5	9566558	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	4	B83,C10,C15,C84
typical_cds_rare	Chr5	9566596	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	1	C15
lof_cds	Chr5	9566636	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	3	B19,B23,C17
typical_cds_rare	Chr5	9566636	T	TA	INDEL	1bp_insertion	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	3	B19,B23,C17
typical_cds_rare	Chr5	9566652	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	1	C55
typical_cds_rare	Chr5	9566708	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	4	B1,B5,B57,B7
typical_cds_rare	Chr5	9566735	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	4	A21,B66,B85,C77
typical_cds_rare	Chr5	9566741	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	1	C53
typical_cds_rare	Chr5	9567650	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	2	A16,C40
typical_cds_rare	Chr5	9567804	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	1	C51
typical_cds_rare	Chr5	9567912	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	2	C73,D6
typical_cds_rare	Chr5	9567936	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	2	C73,D6
typical_cds_rare	Chr5	9568421	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	1	B24
lof_cds	Chr5	9568659	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC130985865	SmilChr05G001144	130985865	rna-XM_057909030.1	23	B101,B107,B124,B139,B19,B32,B38,B60,B61,B74,B82,B9,B90,B92,C17,C44,C49,C6,C62,C71,C76,D2,D3