source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr5	17697676	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	3	A19,B17,B41
typical_cds_rare	Chr5	17697727	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	1	D7
lof_cds	Chr5	17697833	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	113	A1,A13,A14,A21,A23,A25,A4,A5,A6,A8,B1,B101,B102,B104,B107,B11,B110,B111,B112,B118,B12,B120,B121,B122,B127,B13,B130,B131,B133,B135,B137,B140,B16,B21,B23,B24,B27,B28,B30,B31,B34,B35,B36,B38,B40,B47,B52,B54,B57,B6,B60,B61,B62,B69,B7,B72,B73,B77,B8,B81,B84,B89,B9,B90,B91,B92,B93,B94,B95,C1,C12,C2,C20,C21,C24,C26,C28,C29,C30,C31,C33,C35,C4,C40,C43,C44,C46,C47,C48,C5,C51,C52,C56,C58,C59,C6,C60,C63,C66,C68,C70,C72,C75,C77,C80,C83,C87,D1,D3,D4,D7,D8,D9
lof_cds	Chr5	17697837	CCA	C	INDEL	2bp_deletion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	53	A11,A13,A14,A15,A19,A20,A25,A7,A8,B1,B103,B108,B111,B117,B123,B132,B134,B139,B19,B21,B22,B30,B37,B39,B41,B42,B58,B64,B79,B83,B96,B99,C15,C23,C25,C34,C35,C36,C37,C41,C43,C56,C61,C63,C65,C71,C74,C79,C82,C83,C84,C86,D5
lof_cds	Chr5	17697963	T	TCG	INDEL	2bp_insertion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	198	A1,A10,A11,A13,A14,A15,A18,A19,A2,A20,A21,A23,A25,A3,A4,A5,A6,A7,A8,B1,B10,B100,B101,B103,B104,B105,B106,B107,B108,B11,B110,B111,B112,B115,B117,B118,B12,B120,B121,B122,B123,B124,B125,B127,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B140,B16,B21,B22,B23,B24,B26,B27,B28,B3,B30,B31,B33,B35,B36,B37,B38,B39,B4,B40,B41,B42,B45,B46,B47,B48,B49,B51,B53,B54,B55,B56,B57,B58,B6,B60,B61,B62,B63,B64,B65,B68,B69,B7,B70,B71,B73,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B98,B99,C1,C12,C13,C15,C17,C18,C2,C20,C21,C23,C24,C26,C28,C29,C3,C30,C31,C34,C35,C36,C37,C39,C4,C40,C41,C43,C45,C46,C47,C48,C5,C50,C51,C52,C53,C54,C56,C58,C59,C6,C60,C61,C62,C63,C65,C68,C69,C7,C70,C71,C72,C74,C75,C77,C78,C79,C80,C82,C83,C84,C86,C87,D2,D3,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr5	17697980	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	1	B104
lof_cds	Chr5	17697981	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	1	B37
typical_cds_rare	Chr5	17697981	G	GC	INDEL	1bp_insertion	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	1	B37
lof_cds	Chr5	17698109	G	GAC	INDEL	2bp_insertion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	155	A1,A10,A13,A14,A19,A21,A22,A25,A4,A5,A6,A7,A9,B10,B100,B105,B107,B108,B11,B110,B111,B112,B113,B115,B117,B118,B122,B124,B125,B126,B132,B133,B134,B135,B137,B138,B14,B140,B15,B17,B19,B20,B21,B22,B24,B27,B29,B3,B30,B31,B32,B34,B36,B37,B46,B48,B5,B51,B52,B53,B54,B55,B57,B59,B6,B60,B63,B64,B65,B66,B68,B69,B7,B71,B73,B75,B76,B77,B79,B8,B81,B82,B83,B84,B86,B87,B89,B90,B93,B94,B95,B96,B99,C1,C11,C13,C15,C16,C17,C19,C2,C20,C23,C24,C25,C26,C31,C34,C36,C37,C38,C39,C40,C41,C42,C43,C44,C47,C5,C52,C55,C56,C57,C58,C6,C60,C61,C63,C64,C65,C67,C68,C7,C70,C71,C72,C74,C75,C76,C78,C79,C8,C80,C82,C83,C84,C86,C87,C9,D1,D3,D6,D7,D8,D9
lof_cds	Chr5	17698112	GTC	G	INDEL	2bp_deletion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	111	A1,A10,A13,A14,A22,A4,A5,A7,A9,B10,B100,B101,B108,B11,B111,B113,B115,B117,B118,B122,B125,B126,B133,B134,B135,B138,B140,B19,B22,B24,B27,B3,B30,B31,B32,B35,B36,B46,B48,B5,B51,B52,B53,B54,B55,B59,B64,B65,B68,B7,B73,B75,B77,B79,B8,B81,B84,B87,B89,B90,B93,B96,B99,C1,C11,C15,C16,C17,C19,C2,C20,C23,C25,C26,C31,C34,C36,C37,C39,C40,C42,C43,C44,C47,C5,C55,C56,C6,C60,C61,C64,C65,C67,C7,C70,C72,C74,C75,C78,C79,C8,C82,C83,C84,C86,C87,D1,D6,D7,D8,D9
lof_cds	Chr5	17698285	GTC	G	INDEL	2bp_deletion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	7	A23,B101,B123,B52,B97,C20,C57
lof_cds	Chr5	17698288	C	CAG	INDEL	2bp_insertion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	7	A23,B101,B123,B52,B97,C20,C57
lof_cds	Chr5	17698365	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	35	A10,A18,A5,B109,B11,B112,B113,B118,B138,B140,B17,B22,B27,B34,B36,B37,B4,B55,B59,B65,B84,C12,C14,C15,C21,C23,C24,C28,C44,C56,C59,C83,C84,C9,D4
lof_cds	Chr5	17698539	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	7	B122,B131,B61,B8,B83,C10,C52
lof_cds	Chr5	17698554	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	126	A13,A18,A19,A2,A20,A22,A24,A25,A6,A7,A8,B100,B102,B103,B105,B107,B108,B109,B110,B112,B113,B114,B119,B12,B123,B124,B127,B129,B13,B130,B132,B137,B138,B139,B14,B15,B16,B17,B19,B20,B21,B25,B28,B29,B30,B31,B34,B36,B37,B4,B40,B41,B42,B43,B45,B49,B50,B51,B57,B58,B6,B63,B66,B69,B71,B74,B75,B76,B79,B82,B83,B85,B86,B88,B90,B91,B92,B93,B94,B95,B99,C1,C10,C13,C19,C22,C24,C27,C32,C34,C37,C38,C41,C46,C48,C49,C51,C52,C56,C57,C58,C59,C62,C63,C64,C65,C66,C68,C7,C71,C74,C76,C77,C78,C79,C8,C80,C81,C82,C9,D10,D11,D2,D3,D4,D8
lof_cds	Chr5	17698601	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	125	A13,A18,A19,A2,A20,A22,A24,A25,A6,A7,A8,B100,B102,B103,B105,B107,B108,B109,B110,B112,B113,B114,B119,B12,B123,B124,B127,B129,B13,B130,B132,B137,B138,B139,B14,B15,B16,B17,B19,B20,B21,B25,B28,B29,B30,B31,B34,B36,B37,B4,B40,B41,B42,B43,B45,B49,B50,B51,B57,B58,B6,B63,B66,B69,B71,B74,B75,B76,B79,B82,B83,B85,B86,B88,B90,B91,B92,B93,B94,B95,B99,C1,C10,C13,C19,C22,C24,C27,C32,C34,C37,C38,C41,C46,C48,C51,C52,C56,C57,C58,C59,C62,C63,C64,C65,C66,C68,C7,C71,C74,C76,C77,C78,C79,C8,C80,C81,C82,C9,D10,D11,D2,D3,D4,D8
lof_cds	Chr5	17698645	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	9	A2,B102,B130,B28,B69,B74,B93,C58,D8
lof_cds	Chr5	17698648	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	6	B130,B69,B74,B93,C58,D8
lof_cds	Chr5	17698653	G	GAC	INDEL	2bp_insertion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	5	B130,B69,B74,B93,C58
typical_cds_rare	Chr5	17698653	G	GAC	INDEL	2bp_insertion	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	5	B130,B69,B74,B93,C58
lof_cds	Chr5	17698666	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	4	B130,B69,B74,B93
typical_cds_rare	Chr5	17698666	T	TC	INDEL	1bp_insertion	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	4	B130,B69,B74,B93
typical_cds_rare	Chr5	17698677	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	4	B130,B69,B74,B93
lof_cds	Chr5	17698844	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	2	C19,D4
typical_cds_rare	Chr5	17698844	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	2	C19,D4
typical_cds_rare	Chr5	17698846	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	1	B104
lof_cds	Chr5	17699091	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	1	B32
typical_cds_rare	Chr5	17699091	TG	T	INDEL	1bp_deletion	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	1	B32
typical_cds_rare	Chr5	17699144	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	1	C52
typical_cds_rare	Chr5	17699200	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	1	D11
typical_cds_rare	Chr5	17699233	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	3	A19,B17,B41
lof_cds	Chr5	17699285	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	8	B59,B62,B89,C14,C39,C45,C47,C70
lof_cds	Chr5	17699335	CCG	C	INDEL	2bp_deletion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	30	A10,A16,B101,B102,B109,B121,B122,B132,B140,B23,B31,B36,B5,B54,B70,B73,B9,B94,B98,C12,C21,C3,C31,C35,C4,C42,C47,C71,C82,D11
lof_cds	Chr5	17699433	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	68	A11,A13,A14,A15,A20,A3,B1,B103,B106,B11,B111,B115,B117,B118,B13,B134,B136,B15,B18,B2,B21,B22,B26,B3,B30,B38,B39,B44,B49,B56,B58,B60,B64,B65,B68,B7,B71,B78,B80,B84,B88,B96,B97,C15,C17,C18,C23,C25,C29,C34,C35,C36,C37,C39,C43,C44,C50,C6,C61,C70,C72,C79,C83,C84,C86,D2,D5,D9
typical_cds_rare	Chr5	17699470	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	1	B8
typical_cds_rare	Chr5	17699471	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	2	B10,C72
typical_cds_rare	Chr5	17699532	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	2	A1,B84
typical_cds_rare	Chr5	17699534	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	1	B8
lof_cds	Chr5	17699553	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	1	B8
typical_cds_rare	Chr5	17699553	G	GA	INDEL	1bp_insertion	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	1	B8
typical_cds_rare	Chr5	17699560	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	3	B140,B98,C3
typical_cds_rare	Chr5	17699636	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	3	B137,B64,C78
lof_cds	Chr5	17699637	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	3	B137,B64,C78
typical_cds_rare	Chr5	17699637	A	AG	INDEL	1bp_insertion	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	3	B137,B64,C78
lof_cds	Chr5	17699658	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	55	A11,A13,A14,A15,A20,A3,B1,B106,B111,B115,B117,B118,B126,B128,B134,B136,B18,B2,B21,B22,B26,B30,B33,B42,B44,B49,B56,B58,B64,B68,B7,B78,B80,B84,B88,B92,B96,B97,B99,C15,C22,C30,C34,C37,C4,C48,C50,C6,C61,C75,C79,C83,C86,D1,D7
typical_cds_rare	Chr5	17699695	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	5	B101,B134,B20,C3,C72
lof_cds	Chr5	17699696	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	5	B101,B134,B20,C3,C72
typical_cds_rare	Chr5	17699696	AAG	A	INDEL	2bp_deletion	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	5	B101,B134,B20,C3,C72
typical_cds_rare	Chr5	17699701	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	4	B129,B134,B9,C72
typical_cds_rare	Chr5	17699758	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	2	B111,C72
typical_cds_rare	Chr5	17699763	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	1	D3
lof_cds	Chr5	17699833	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	48	A22,A24,A9,B107,B110,B119,B123,B124,B128,B133,B135,B16,B30,B32,B36,B40,B47,B48,B6,B61,B63,B66,B70,B73,B75,B76,B81,B87,B98,C1,C16,C17,C20,C27,C46,C49,C53,C54,C57,C63,C64,C66,C73,D1,D10,D11,D2,D6
lof_cds	Chr5	17699834	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	1	D3
typical_cds_rare	Chr5	17699834	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986456	SmilChr05G001795	130986456	rna-XM_057909871.1	1	D3