source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr5	25399624	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	D11,D9
lof_cds	Chr5	25399625	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	101	A14,A15,A19,A2,A21,A24,A25,A5,A6,A8,A9,B101,B103,B104,B106,B107,B108,B109,B111,B112,B113,B117,B119,B122,B131,B135,B138,B18,B2,B20,B23,B24,B31,B33,B39,B4,B40,B41,B42,B43,B46,B48,B53,B55,B6,B60,B61,B65,B66,B69,B7,B70,B73,B75,B77,B81,B86,B88,B91,B93,B95,B98,C11,C13,C15,C16,C18,C19,C20,C22,C25,C27,C30,C31,C33,C34,C37,C38,C44,C47,C49,C53,C54,C55,C62,C64,C67,C69,C70,C71,C72,C78,C86,C9,D1,D2,D4,D5,D6,D8,D9
lof_cds	Chr5	25399628	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	110	A14,A15,A19,A2,A21,A24,A25,A5,A6,A8,A9,B1,B101,B102,B103,B104,B105,B106,B107,B108,B109,B111,B112,B113,B117,B119,B121,B122,B131,B135,B138,B18,B2,B20,B23,B24,B31,B32,B33,B37,B39,B4,B40,B41,B42,B43,B46,B48,B53,B55,B6,B60,B61,B65,B66,B67,B69,B7,B70,B71,B73,B75,B77,B81,B86,B88,B93,B95,B98,C11,C13,C15,C16,C18,C19,C20,C22,C25,C27,C30,C31,C33,C34,C37,C38,C41,C44,C45,C47,C49,C53,C54,C55,C62,C64,C67,C69,C70,C71,C72,C78,C86,C87,D1,D2,D4,D5,D6,D8,D9
typical_cds_rare	Chr5	25399629	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	3	B106,B139,B71
typical_cds_rare	Chr5	25399632	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	1	D3
lof_cds	Chr5	25399636	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	1	B63
typical_cds_rare	Chr5	25399636	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	1	B63
typical_cds_rare	Chr5	25399638	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	3	B101,B106,B139
typical_cds_rare	Chr5	25399639	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B49,B83
lof_cds	Chr5	25399654	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B106,B139
typical_cds_rare	Chr5	25399654	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B106,B139
lof_cds	Chr5	25399659	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	7	A8,B113,B2,B20,B98,C15,D4
lof_cds	Chr5	25399664	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B49,B83
typical_cds_rare	Chr5	25399664	G	GCA	INDEL	2bp_insertion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B49,B83
typical_cds_rare	Chr5	25399674	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	5	A23,B131,B140,B52,C29
typical_cds_rare	Chr5	25399681	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B16,C70
typical_cds_rare	Chr5	25399684	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B106,B139
lof_cds	Chr5	25399692	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	5	B122,B3,B49,B83,B91
typical_cds_rare	Chr5	25399692	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	5	B122,B3,B49,B83,B91
typical_cds_rare	Chr5	25399698	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B68,B75
typical_cds_rare	Chr5	25399701	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	3	B3,B49,B83
lof_cds	Chr5	25399706	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	4	B3,B49,B68,B91
typical_cds_rare	Chr5	25399706	G	GGA	INDEL	2bp_insertion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	4	B3,B49,B68,B91
lof_cds	Chr5	25399707	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	104	A1,A11,A14,A19,A21,A23,A24,A25,A5,A8,A9,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B111,B112,B119,B122,B129,B131,B132,B134,B136,B140,B17,B19,B2,B20,B23,B29,B36,B39,B40,B41,B42,B44,B48,B53,B55,B56,B6,B60,B61,B65,B67,B68,B69,B7,B70,B71,B73,B77,B80,B87,B88,B89,B9,B95,B96,B97,B98,C11,C13,C14,C16,C17,C28,C3,C31,C4,C41,C43,C44,C46,C47,C50,C53,C55,C60,C62,C67,C69,C72,C74,C75,C77,C8,C80,C81,C86,C87,D11,D3,D4,D6,D8,D9
lof_cds	Chr5	25399708	G	GGT	INDEL	2bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	104	A1,A11,A14,A15,A19,A21,A23,A24,A25,A5,A8,A9,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B112,B119,B122,B129,B131,B132,B134,B136,B140,B17,B19,B2,B20,B23,B29,B36,B39,B40,B41,B42,B44,B48,B53,B55,B56,B6,B60,B61,B65,B67,B68,B69,B7,B70,B71,B73,B77,B80,B87,B88,B89,B9,B95,B96,B97,B98,C11,C13,C14,C16,C17,C28,C3,C31,C4,C41,C43,C44,C46,C47,C50,C53,C55,C60,C62,C67,C69,C72,C74,C75,C77,C8,C80,C81,C86,C87,D11,D3,D4,D6,D8,D9
lof_cds	Chr5	25399722	GCA	G	INDEL	2bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	99	A1,A11,A14,A19,A21,A23,A24,A5,A8,A9,B100,B101,B102,B103,B104,B105,B106,B108,B109,B111,B112,B119,B129,B131,B132,B134,B140,B16,B19,B2,B20,B23,B29,B39,B40,B41,B42,B44,B48,B53,B55,B56,B6,B60,B61,B65,B67,B68,B69,B7,B70,B71,B77,B80,B87,B88,B89,B9,B95,B96,B97,B98,C11,C13,C14,C16,C17,C28,C3,C31,C4,C40,C41,C43,C45,C46,C47,C50,C53,C55,C60,C62,C67,C69,C72,C74,C75,C77,C8,C80,C81,C86,C87,D11,D3,D4,D6,D8,D9
lof_cds	Chr5	25399787	CGT	C	INDEL	2bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	154	A10,A14,A16,A19,A20,A21,A22,A23,A24,A25,A4,A5,A6,A8,A9,B100,B101,B102,B103,B104,B105,B108,B11,B110,B113,B114,B119,B12,B120,B123,B127,B128,B132,B133,B134,B135,B138,B139,B140,B15,B16,B18,B19,B2,B20,B23,B26,B28,B29,B3,B33,B34,B38,B4,B40,B41,B42,B43,B44,B45,B46,B48,B49,B51,B53,B55,B56,B57,B61,B64,B65,B66,B67,B7,B71,B72,B73,B75,B78,B79,B8,B85,B86,B87,B88,B89,B9,B91,B93,B95,B96,B97,B98,C1,C11,C12,C13,C15,C16,C18,C19,C20,C23,C24,C25,C29,C31,C33,C34,C37,C39,C4,C40,C43,C45,C46,C47,C48,C5,C50,C51,C53,C54,C55,C58,C59,C6,C60,C62,C63,C64,C66,C69,C70,C71,C72,C73,C74,C75,C8,C80,C81,C82,C86,C87,D10,D11,D2,D3,D4,D5,D7,D8,D9
lof_cds	Chr5	25399790	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	154	A10,A14,A16,A19,A20,A21,A22,A23,A24,A25,A4,A5,A6,A8,A9,B100,B101,B102,B103,B104,B105,B108,B11,B110,B113,B114,B119,B12,B120,B123,B127,B128,B132,B133,B134,B135,B138,B139,B140,B15,B16,B18,B19,B2,B20,B23,B26,B28,B29,B3,B33,B34,B38,B4,B40,B41,B42,B43,B44,B45,B46,B48,B49,B51,B53,B55,B56,B57,B61,B64,B65,B66,B67,B7,B71,B72,B73,B75,B78,B79,B8,B85,B86,B87,B88,B89,B9,B91,B93,B95,B96,B97,B98,C1,C11,C12,C13,C15,C16,C18,C19,C20,C23,C24,C25,C29,C31,C33,C34,C37,C39,C4,C40,C43,C45,C46,C47,C48,C5,C50,C51,C53,C54,C55,C58,C59,C6,C60,C62,C63,C64,C66,C69,C70,C71,C72,C73,C74,C75,C8,C80,C81,C82,C86,C87,D10,D11,D2,D3,D4,D5,D7,D8,D9
lof_cds	Chr5	25399805	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	3	B18,B49,B91
typical_cds_rare	Chr5	25399805	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	3	B18,B49,B91
lof_cds	Chr5	25399825	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	1	C8
typical_cds_rare	Chr5	25399825	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	1	C8
lof_cds	Chr5	25399836	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	53	A13,A18,A2,A23,A8,B1,B102,B109,B11,B115,B118,B120,B121,B126,B131,B14,B140,B21,B27,B3,B47,B52,B62,B67,B68,B70,B71,B78,B8,B82,B89,B93,C2,C23,C26,C29,C35,C36,C40,C41,C45,C56,C59,C65,C7,C78,C79,C8,C81,C85,C87,D3,D7
lof_cds	Chr5	25399838	T	TTA	INDEL	2bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	1	B60
typical_cds_rare	Chr5	25399838	T	TTA	INDEL	2bp_insertion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	1	B60
typical_cds_rare	Chr5	25399841	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B32,B60
lof_cds	Chr5	25399843	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	14	A10,B106,B124,B128,B134,B137,B139,B15,B9,C58,C75,C79,C85,D10
lof_cds	Chr5	25399861	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	28	A13,A18,A8,B102,B11,B118,B120,B126,B14,B27,B3,B47,B62,B67,B68,B71,B8,B89,C26,C36,C40,C41,C45,C56,C59,C65,C81,C85
lof_cds	Chr5	25399879	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	1	D10
typical_cds_rare	Chr5	25399879	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	1	D10
lof_cds	Chr5	25399885	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	3	B104,B122,D6
typical_cds_rare	Chr5	25399885	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	3	B104,B122,D6
lof_cds	Chr5	25399897	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B104,D6
typical_cds_rare	Chr5	25399897	TCA	T	INDEL	2bp_deletion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B104,D6
lof_cds	Chr5	25399899	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	146	A11,A14,A19,A21,A23,A24,A25,A5,A6,A8,A9,B101,B102,B104,B105,B107,B108,B109,B11,B112,B113,B114,B117,B118,B119,B120,B122,B123,B128,B130,B132,B133,B134,B135,B136,B138,B15,B16,B18,B19,B2,B20,B23,B26,B29,B3,B32,B33,B34,B35,B38,B39,B40,B42,B43,B44,B45,B48,B51,B53,B55,B57,B60,B61,B63,B64,B65,B66,B67,B69,B7,B70,B71,B72,B73,B75,B78,B79,B83,B85,B86,B87,B88,B89,B91,B92,B93,B95,B97,B98,C1,C11,C12,C13,C15,C16,C18,C19,C2,C23,C24,C29,C30,C33,C34,C37,C39,C4,C41,C43,C45,C46,C47,C49,C50,C52,C55,C56,C57,C58,C59,C6,C60,C62,C63,C64,C66,C69,C70,C71,C72,C73,C74,C80,C81,C82,C84,C87,C9,D10,D2,D3,D4,D5,D7,D8
lof_cds	Chr5	25399902	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	146	A11,A14,A19,A21,A23,A24,A25,A5,A6,A8,A9,B101,B102,B104,B105,B107,B108,B109,B11,B112,B113,B114,B117,B118,B119,B120,B122,B123,B128,B130,B132,B133,B134,B135,B136,B138,B15,B16,B18,B19,B2,B20,B23,B26,B29,B3,B32,B33,B34,B35,B38,B39,B40,B42,B43,B44,B45,B48,B51,B53,B55,B57,B60,B61,B63,B64,B65,B66,B67,B69,B7,B70,B71,B72,B73,B75,B78,B79,B83,B85,B86,B87,B88,B89,B91,B92,B93,B95,B97,B98,C1,C11,C12,C13,C15,C16,C18,C19,C2,C23,C24,C29,C30,C33,C34,C37,C39,C4,C41,C43,C45,C46,C47,C49,C50,C52,C55,C56,C57,C58,C59,C6,C60,C62,C63,C64,C66,C69,C70,C71,C72,C73,C74,C80,C81,C82,C84,C87,C9,D10,D2,D3,D4,D5,D7,D8
lof_cds	Chr5	25399912	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B114,B60
typical_cds_rare	Chr5	25399912	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B114,B60
typical_cds_rare	Chr5	25399919	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	4	A13,B130,B48,C4
typical_cds_rare	Chr5	25399926	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	1	B101
typical_cds_rare	Chr5	25399927	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B104,D6
lof_cds	Chr5	25399935	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B104,D6
typical_cds_rare	Chr5	25399935	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B104,D6
typical_cds_rare	Chr5	25399943	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B104,D6
lof_cds	Chr5	25399944	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	5	B112,B130,B69,B70,C41
typical_cds_rare	Chr5	25399944	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	5	B112,B130,B69,B70,C41
lof_cds	Chr5	25399945	C	CAG	INDEL	2bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	82	A11,A14,A19,A21,A23,A24,A25,A5,A6,A8,B101,B102,B104,B105,B114,B117,B119,B122,B123,B132,B136,B138,B15,B16,B2,B20,B26,B29,B34,B35,B38,B39,B42,B43,B51,B55,B60,B64,B7,B72,B75,B80,B83,B85,B86,B87,B88,B95,B97,B98,C11,C12,C15,C16,C18,C19,C2,C30,C34,C37,C39,C4,C43,C45,C49,C50,C55,C6,C60,C62,C63,C64,C66,C69,C72,C80,C81,C82,D10,D2,D3,D4
lof_cds	Chr5	25399946	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	80	A11,A14,A19,A21,A23,A24,A25,A5,A6,A8,B101,B102,B104,B105,B109,B114,B117,B119,B122,B123,B132,B136,B138,B15,B16,B2,B20,B26,B29,B34,B35,B43,B51,B55,B60,B64,B7,B72,B75,B80,B83,B85,B86,B87,B88,B93,B95,B97,B98,C11,C12,C15,C18,C19,C2,C23,C30,C34,C37,C39,C4,C43,C45,C49,C50,C55,C6,C60,C62,C63,C64,C66,C69,C72,C80,C82,D10,D2,D3,D4
lof_cds	Chr5	25399949	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	6	B38,B39,B42,C18,C41,C81
lof_cds	Chr5	25399962	GCC	G	INDEL	2bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	21	A11,B102,B2,B20,B55,B85,B86,B88,B95,B98,C11,C19,C30,C39,C43,C55,C62,C72,C80,D3,D4
lof_cds	Chr5	25399968	C	CGT	INDEL	2bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	5	B114,B34,C2,C37,C69
typical_cds_rare	Chr5	25399968	C	CGT	INDEL	2bp_insertion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	5	B114,B34,C2,C37,C69
lof_cds	Chr5	25399972	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	57	A11,A21,A5,A6,B102,B105,B112,B114,B117,B122,B130,B136,B15,B16,B2,B20,B29,B34,B35,B38,B51,B55,B69,B7,B70,B75,B80,B83,B85,B86,B88,B93,B95,B97,B98,C11,C12,C18,C19,C2,C30,C37,C39,C41,C43,C49,C55,C62,C63,C66,C69,C72,C80,C81,D2,D3,D4
lof_cds	Chr5	25399979	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	10	A11,B85,B86,B95,C19,C39,C43,C62,C72,D3
lof_cds	Chr5	25399990	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	39	A21,A5,A6,B105,B112,B117,B122,B16,B20,B29,B38,B51,B55,B7,B75,B80,B85,B86,B93,B95,B97,B98,C12,C19,C39,C41,C43,C49,C55,C62,C63,C66,C69,C72,C80,C81,D2,D3,D4
lof_cds	Chr5	25399992	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	40	A21,A5,A6,B105,B112,B117,B122,B16,B20,B29,B38,B51,B55,B7,B75,B80,B83,B85,B86,B93,B95,B97,B98,C12,C19,C39,C41,C43,C55,C62,C63,C66,C69,C71,C72,C80,C81,D2,D3,D4
typical_cds_rare	Chr5	25399997	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	1	D4
lof_cds	Chr5	25400005	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	51	A21,A4,A7,A9,B106,B110,B119,B123,B129,B134,B140,B16,B2,B22,B30,B31,B33,B36,B38,B39,B4,B41,B47,B50,B55,B56,B57,B59,B63,B66,B72,B76,B82,B87,B90,B92,B96,C13,C14,C17,C21,C22,C24,C32,C35,C46,C68,C70,C74,C83,C84
lof_cds	Chr5	25400021	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	17	B104,B17,B19,B24,B55,B66,B73,B80,B83,B95,C17,C19,C41,C72,D11,D3,D4
lof_cds	Chr5	25400033	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	19	B104,B112,B130,B17,B19,B24,B55,B66,B73,B80,B83,B95,C17,C19,C41,C72,D11,D3,D4
lof_cds	Chr5	25400038	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	108	A1,A10,A14,A21,A25,A4,A5,A7,A8,A9,B10,B101,B105,B106,B108,B110,B113,B118,B119,B12,B123,B124,B126,B129,B130,B134,B137,B140,B16,B18,B2,B22,B23,B27,B28,B31,B33,B35,B36,B38,B39,B4,B41,B47,B5,B50,B51,B52,B55,B56,B57,B58,B59,B60,B63,B67,B72,B75,B76,B77,B81,B82,B84,B87,B90,B92,B96,B99,C1,C10,C12,C13,C14,C20,C21,C22,C24,C25,C26,C3,C31,C32,C33,C35,C42,C46,C47,C51,C52,C53,C57,C58,C59,C63,C65,C67,C68,C70,C73,C74,C75,C76,C80,C83,C84,C86,C87,C9
typical_cds_rare	Chr5	25400064	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	4	A1,B108,B113,C74
lof_cds	Chr5	25400066	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	26	A3,B10,B113,B13,B132,B19,B21,B28,B41,B64,B65,B7,B79,B80,B84,B94,B97,C14,C28,C5,C6,C60,C8,D10,D5,D6
lof_cds	Chr5	25400086	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	18	B110,B122,B51,B54,B55,B60,B69,C13,C19,C27,C29,C31,C36,C52,C55,C71,C85,D5
lof_cds	Chr5	25400095	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	16	B110,B122,B51,B54,B55,B60,B69,C13,C19,C27,C31,C36,C55,C71,C85,D5
typical_cds_rare	Chr5	25400137	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B106,B139
lof_cds	Chr5	25400202	T	TCC	INDEL	2bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	1	C18
typical_cds_rare	Chr5	25400202	T	TCC	INDEL	2bp_insertion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	1	C18
lof_cds	Chr5	25400208	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B50,C18
typical_cds_rare	Chr5	25400208	TTC	T	INDEL	2bp_deletion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B50,C18
lof_cds	Chr5	25400246	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	5	B105,B2,C11,C49,C69
typical_cds_rare	Chr5	25400246	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	5	B105,B2,C11,C49,C69
lof_cds	Chr5	25400250	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	5	A23,B131,B140,B52,C29
typical_cds_rare	Chr5	25400250	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	5	A23,B131,B140,B52,C29
lof_cds	Chr5	25400253	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	3	B123,B75,C18
typical_cds_rare	Chr5	25400253	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	3	B123,B75,C18
lof_cds	Chr5	25400283	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	4	B122,B64,B7,C27
typical_cds_rare	Chr5	25400283	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	4	B122,B64,B7,C27
lof_cds	Chr5	25400287	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	108	A13,A16,A18,A21,A3,A4,A6,A7,A9,B1,B10,B103,B110,B111,B113,B115,B119,B123,B125,B129,B13,B131,B134,B137,B140,B16,B17,B21,B22,B25,B28,B30,B31,B32,B33,B34,B36,B37,B38,B39,B4,B40,B41,B45,B47,B48,B49,B54,B55,B56,B57,B59,B63,B64,B65,B68,B7,B72,B74,B76,B77,B79,B80,B82,B83,B84,B86,B89,B90,B92,B94,B96,B99,C10,C13,C14,C17,C21,C22,C24,C26,C28,C32,C35,C46,C48,C5,C52,C54,C6,C60,C62,C63,C64,C66,C68,C70,C73,C74,C8,C82,C83,C84,C87,D10,D11,D5,D6
typical_cds_rare	Chr5	25400300	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	1	C35
lof_cds	Chr5	25400309	T	TAC	INDEL	2bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	39	A11,A20,A5,B100,B102,B106,B108,B113,B121,B132,B137,B139,B14,B19,B2,B20,B23,B24,B50,B66,B73,B87,B88,B97,B98,C15,C16,C33,C36,C39,C4,C43,C55,C72,C76,C80,D11,D3,D9
typical_cds_rare	Chr5	25400341	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	1	D3
typical_cds_rare	Chr5	25400358	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	3	B65,B82,C78
typical_cds_rare	Chr5	25400401	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	1	B50
lof_cds	Chr5	25400413	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	5	B53,B75,C61,C77,D9
typical_cds_rare	Chr5	25400413	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	5	B53,B75,C61,C77,D9
lof_cds	Chr5	25400418	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	5	B53,B75,C61,C77,D9
typical_cds_rare	Chr5	25400418	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	5	B53,B75,C61,C77,D9
lof_cds	Chr5	25400423	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	5	B53,B75,C61,C77,D9
typical_cds_rare	Chr5	25400423	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	5	B53,B75,C61,C77,D9
typical_cds_rare	Chr5	25400425	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	3	A22,C47,C50
lof_cds	Chr5	25400428	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	3	B53,C77,D9
typical_cds_rare	Chr5	25400428	G	GCA	INDEL	2bp_insertion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	3	B53,C77,D9
lof_cds	Chr5	25400430	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	5	B53,B75,C61,C77,D9
typical_cds_rare	Chr5	25400430	AAT	A	INDEL	2bp_deletion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	5	B53,B75,C61,C77,D9
lof_cds	Chr5	25400438	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	16	A19,A20,B100,B118,B127,B14,B77,B98,C1,C22,C23,C39,C45,C55,C72,C76
lof_cds	Chr5	25400464	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	1	A2
typical_cds_rare	Chr5	25400464	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	1	A2
typical_cds_rare	Chr5	25400488	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B106,B139
lof_cds	Chr5	25400494	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	4	B117,B14,B15,C55
typical_cds_rare	Chr5	25400494	CG	C	INDEL	1bp_deletion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	4	B117,B14,B15,C55
typical_cds_rare	Chr5	25400518	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	1	D3
lof_cds	Chr5	25400548	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	17	B12,B137,B28,B31,B75,B95,C10,C20,C31,C42,C51,C63,C73,C76,C86,C9,D11
typical_cds_rare	Chr5	25400561	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	A9,C39
typical_cds_rare	Chr5	25400564	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	1	C19
typical_cds_rare	Chr5	25400577	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	C49,C69
typical_cds_rare	Chr5	25400578	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	C49,C69
typical_cds_rare	Chr5	25400596	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B75,B83
lof_cds	Chr5	25400601	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	13	A20,B122,B139,B23,B66,C21,C36,C41,C44,C49,C69,C72,C77
lof_cds	Chr5	25400635	CCG	C	INDEL	2bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	10	A20,B122,B139,B23,C21,C41,C44,C55,C72,C77
lof_cds	Chr5	25400639	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	10	A20,B122,B139,B23,C21,C41,C44,C55,C72,C77
lof_cds	Chr5	25400644	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	3	B136,B34,C70
typical_cds_rare	Chr5	25400644	AAC	A	INDEL	2bp_deletion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	3	B136,B34,C70
lof_cds	Chr5	25400669	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	17	A2,B134,B31,B4,B45,B50,B64,B7,C20,C24,C26,C29,C48,C58,C64,C79,C82
lof_cds	Chr5	25400672	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	16	A2,B134,B31,B4,B45,B50,B64,B7,C20,C24,C26,C29,C48,C58,C79,C82
lof_cds	Chr5	25400691	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	C21,C41
typical_cds_rare	Chr5	25400691	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	C21,C41
lof_cds	Chr5	25400695	CGT	C	INDEL	2bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	C21,C41
typical_cds_rare	Chr5	25400695	CGT	C	INDEL	2bp_deletion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	C21,C41
typical_cds_rare	Chr5	25400722	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B124,B128
typical_cds_rare	Chr5	25400724	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B106,B139
lof_cds	Chr5	25400745	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B124,C26
typical_cds_rare	Chr5	25400745	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131025710	SmilChr05G002344	131025710	rna-XM_057955502.1	2	B124,C26