source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr5	25837210	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	3	A3,B35,C4
typical_cds_rare	Chr5	25837210	G	GTA	INDEL	2bp_insertion	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	3	A3,B35,C4
typical_cds_rare	Chr5	25837220	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	5	B140,B69,C19,C32,C68
typical_cds_rare	Chr5	25837221	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	3	A3,B35,C4
typical_cds_rare	Chr5	25837229	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	3	B106,B139,D10
typical_cds_rare	Chr5	25837235	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	2	C64,C66
lof_cds	Chr5	25837276	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	11	A3,B103,B115,B125,B22,B31,B36,B45,B79,C12,D11
lof_cds	Chr5	25837330	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	10	B120,B122,B138,B49,B77,B94,C20,C29,C33,C65
typical_cds_rare	Chr5	25837343	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	5	B106,B139,C64,C66,D10
lof_cds	Chr5	25837353	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	10	B120,B122,B49,B77,B94,C20,C29,C33,C37,C65
typical_cds_rare	Chr5	25837357	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	4	B69,C19,C32,C68
typical_cds_rare	Chr5	25837359	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	1	A18
typical_cds_rare	Chr5	25837444	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	1	B79
typical_cds_rare	Chr5	25837484	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	2	B117,B46
lof_cds	Chr5	25837511	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	4	B101,B131,B79,C43
typical_cds_rare	Chr5	25837511	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	4	B101,B131,B79,C43
lof_cds	Chr5	25837522	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	9	A21,A9,B106,B119,B123,B134,B2,B87,C35
typical_cds_rare	Chr5	25837537	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	4	B101,B131,B79,C43
typical_cds_rare	Chr5	25837542	TC	*	INDEL	1bp_deletion	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	3	B101,B131,B79
lof_cds	Chr5	25837554	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	4	B101,B131,B79,C43
typical_cds_rare	Chr5	25837554	AAT	A	INDEL	2bp_deletion	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	4	B101,B131,B79,C43
typical_cds_rare	Chr5	25837558	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	1	B85
typical_cds_rare	Chr5	25837576	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	2	C64,C66
typical_cds_rare	Chr5	25837652	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	1	C54
typical_cds_rare	Chr5	25837654	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	1	B79
lof_cds	Chr5	25837657	CTA	C	INDEL	2bp_deletion	frameshift_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	57	A15,A18,A20,A23,A24,A25,A6,B105,B107,B113,B115,B12,B128,B129,B135,B136,B16,B17,B19,B21,B25,B31,B37,B48,B52,B53,B58,B59,B62,B63,B65,B7,B74,B79,B83,B92,B93,C10,C15,C18,C19,C32,C33,C34,C37,C44,C49,C52,C61,C67,C72,C77,C78,C80,C83,D6,D7
lof_cds	Chr5	25837663	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	56	A15,A18,A20,A23,A24,A25,A6,B105,B107,B113,B115,B117,B12,B128,B129,B135,B136,B16,B17,B19,B21,B25,B31,B37,B48,B52,B53,B58,B62,B63,B65,B7,B74,B79,B83,B92,B93,C10,C15,C18,C19,C32,C34,C37,C44,C49,C52,C61,C67,C72,C77,C78,C80,C83,D6,D7
lof_cds	Chr5	25837664	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	57	A15,A18,A20,A23,A24,A25,A6,B105,B107,B113,B115,B117,B12,B128,B129,B135,B136,B16,B17,B19,B21,B25,B31,B37,B48,B52,B53,B58,B62,B63,B65,B69,B7,B74,B79,B83,B92,B93,C10,C15,C18,C19,C32,C34,C37,C44,C49,C52,C61,C67,C72,C77,C78,C80,C83,D6,D7
lof_cds	Chr5	25837688	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	3	B32,B5,B6
typical_cds_rare	Chr5	25837688	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	3	B32,B5,B6
typical_cds_rare	Chr5	25837715	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	2	A9,B13
typical_cds_rare	Chr5	25837731	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	1	B16
lof_cds	Chr5	25837732	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	26	A14,A23,B107,B108,B114,B118,B12,B132,B140,B34,B4,B56,B61,B73,B76,B78,B88,B9,B94,B97,B98,B99,C25,C35,C43,C72
lof_cds	Chr5	25837740	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	23	A14,A23,B107,B108,B114,B12,B132,B140,B34,B56,B61,B76,B78,B88,B9,B94,B97,B98,B99,C25,C35,C43,C72
typical_cds_rare	Chr5	25837749	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	3	B128,C19,C5
typical_cds_rare	Chr5	25837758	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	2	A9,B13
typical_cds_rare	Chr5	25837855	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	1	A10
lof_cds	Chr5	25837917	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	38	A23,A7,B101,B107,B108,B113,B121,B124,B127,B131,B22,B32,B37,B49,B5,B57,B67,B79,B81,B86,B88,B91,B95,B97,C23,C25,C26,C33,C37,C39,C43,C51,C53,C55,C77,D4,D6,D7
lof_cds	Chr5	25837936	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	23	A23,A7,B101,B107,B124,B131,B32,B37,B49,B5,B57,B81,B86,B88,B91,B95,C26,C37,C39,C43,C53,C55,D6
typical_cds_rare	Chr5	25837956	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	2	C64,C66
typical_cds_rare	Chr5	25838004	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	4	B69,C19,C32,C68
typical_cds_rare	Chr5	25838010	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	2	C64,C66
typical_cds_rare	Chr5	25838037	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	2	B112,D3
typical_cds_rare	Chr5	25838040	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	4	A3,B125,B35,C4
typical_cds_rare	Chr5	25838044	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	4	B69,C19,C32,C68
typical_cds_rare	Chr5	25838050	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	4	A3,B125,B35,C4
typical_cds_rare	Chr5	25838061	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	4	A3,B125,B35,C4
lof_cds	Chr5	25838069	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	68	A1,A15,A19,A20,A21,A6,B102,B107,B108,B111,B115,B120,B122,B124,B126,B127,B130,B133,B14,B16,B17,B18,B22,B29,B35,B4,B40,B42,B49,B51,B54,B65,B75,B78,B79,B8,B80,B81,B83,B89,B94,B99,C1,C12,C17,C18,C22,C24,C27,C33,C34,C40,C42,C49,C50,C60,C62,C67,C72,C77,C78,C79,C8,C81,C82,C84,D11,D5
lof_cds	Chr5	25838072	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	68	A1,A15,A19,A20,A21,A6,B102,B107,B108,B111,B115,B120,B122,B124,B126,B127,B130,B133,B14,B16,B17,B18,B22,B25,B29,B35,B4,B40,B42,B49,B51,B54,B65,B75,B78,B79,B8,B80,B81,B83,B89,B94,B99,C1,C12,C17,C18,C22,C24,C27,C33,C34,C40,C49,C50,C60,C62,C67,C72,C77,C78,C79,C8,C81,C82,C84,D11,D5
lof_cds	Chr5	25838089	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	6	A19,A21,B109,B75,B8,B89
typical_cds_rare	Chr5	25838090	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	3	A3,B133,B35
typical_cds_rare	Chr5	25838092	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	5	A5,B101,B53,B70,C3
typical_cds_rare	Chr5	25838111	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	2	C64,C66
lof_cds	Chr5	25838113	T	TCC	INDEL	2bp_insertion	frameshift_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	3	B106,B139,D10
typical_cds_rare	Chr5	25838113	T	TCC	INDEL	2bp_insertion	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	3	B106,B139,D10
lof_cds	Chr5	25838121	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	6	B120,B133,B35,B46,B94,C77
lof_cds	Chr5	25838139	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	3	A3,B104,B35
typical_cds_rare	Chr5	25838139	TTG	T	INDEL	2bp_deletion	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	3	A3,B104,B35
typical_cds_rare	Chr5	25838147	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	3	A3,B104,B35
lof_cds	Chr5	25838158	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	11	B139,B23,B38,B44,B61,B7,B97,B98,C15,C76,C80
typical_cds_rare	Chr5	25838183	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	4	B69,C19,C32,C68
typical_cds_rare	Chr5	25838186	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	3	A3,B104,B35
lof_cds	Chr5	25838200	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	9	A3,B115,B125,B22,B25,B31,B36,B45,C12
typical_cds_rare	Chr5	25838204	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	4	B69,C19,C32,C68
typical_cds_rare	Chr5	25838223	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	2	A24,C42
lof_cds	Chr5	25838230	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	10	A14,A18,A8,B122,B2,B38,B7,B78,B91,D1
lof_cds	Chr5	25838233	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	10	A14,A18,A8,B122,B2,B38,B7,B78,B91,D1
lof_cds	Chr5	25838245	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	23	A21,A3,A9,B106,B119,B123,B125,B13,B134,B2,B30,B41,B85,B87,B95,C10,C35,C36,C4,C63,C73,D11,D6
lof_cds	Chr5	25838269	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	6	A3,B125,B13,B85,C4,D11
typical_cds_rare	Chr5	25838286	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	1	B101
typical_cds_rare	Chr5	25838299	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	3	B106,B139,D10
typical_cds_rare	Chr5	25838342	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	3	B106,B139,D10
typical_cds_rare	Chr5	25838344	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	5	A3,B125,B13,B85,C4
typical_cds_rare	Chr5	25838350	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	4	A3,B125,B13,C4
typical_cds_rare	Chr5	25838369	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	3	B125,B13,C4
typical_cds_rare	Chr5	25838383	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	4	B33,B40,B68,C48
typical_cds_rare	Chr5	25838385	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	3	B125,B13,C4
typical_cds_rare	Chr5	25838388	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	3	B125,B13,C4
typical_cds_rare	Chr5	25838395	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	3	B125,B13,C4
typical_cds_rare	Chr5	25838407	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	3	B106,B139,D10
lof_cds	Chr5	25838662	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	12	A3,B103,B125,B13,B22,B25,B31,B35,B36,B45,C12,D11
lof_cds	Chr5	25838668	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	10	A3,B103,B125,B22,B25,B31,B36,B45,C12,D11
lof_cds	Chr5	25838686	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	4	B26,B61,B64,B8
typical_cds_rare	Chr5	25838686	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	4	B26,B61,B64,B8
typical_cds_rare	Chr5	25838709	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025715	SmilChr05G002367	131025715	rna-XM_057955507.1	2	B90,B92