source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr5	32523419	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	148	A1,A10,A11,A14,A15,A2,A20,A21,A24,A4,A6,A7,A9,B101,B102,B103,B105,B106,B108,B110,B111,B112,B118,B119,B120,B121,B123,B124,B125,B126,B127,B13,B130,B132,B135,B136,B137,B138,B139,B14,B140,B15,B18,B20,B22,B24,B25,B27,B28,B29,B3,B30,B32,B35,B36,B37,B38,B39,B40,B41,B43,B44,B45,B47,B48,B49,B5,B50,B51,B52,B54,B56,B57,B58,B59,B60,B61,B62,B64,B69,B70,B72,B74,B75,B77,B8,B82,B83,B85,B86,B87,B88,B89,B91,B92,B95,B96,B97,B98,C1,C13,C14,C15,C16,C18,C19,C20,C21,C25,C26,C27,C28,C31,C33,C34,C36,C37,C38,C44,C46,C47,C48,C50,C53,C55,C57,C60,C61,C62,C63,C64,C66,C69,C70,C71,C73,C74,C75,C76,C77,C80,C81,C84,C87,D1,D2,D6,D8
lof_cds	Chr5	32523421	G	GGT	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	125	A10,A11,A14,A15,A2,A20,A21,A24,A4,A6,A8,A9,B101,B102,B105,B106,B108,B110,B111,B112,B118,B119,B120,B121,B123,B124,B125,B126,B13,B130,B135,B137,B138,B139,B14,B140,B15,B18,B20,B22,B24,B25,B27,B28,B29,B3,B30,B32,B35,B36,B37,B38,B39,B41,B43,B45,B47,B48,B49,B5,B50,B51,B52,B54,B56,B57,B58,B60,B61,B62,B64,B70,B75,B77,B8,B82,B83,B85,B86,B87,B89,B92,B95,B96,B97,B98,C1,C13,C15,C16,C18,C19,C20,C21,C25,C27,C31,C33,C36,C37,C38,C44,C46,C48,C50,C53,C55,C57,C60,C61,C63,C70,C71,C73,C74,C75,C77,C80,C81,C84,C87,D1,D2,D6,D8
lof_cds	Chr5	32523422	TAC	T	INDEL	2bp_deletion	frameshift_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	129	A10,A11,A14,A15,A2,A20,A21,A24,A4,A6,A8,A9,B101,B102,B105,B106,B108,B110,B111,B112,B118,B119,B120,B121,B123,B124,B125,B126,B13,B130,B135,B137,B138,B139,B14,B140,B15,B18,B20,B22,B24,B25,B27,B28,B29,B3,B30,B32,B35,B36,B37,B38,B39,B41,B43,B45,B47,B48,B49,B5,B50,B51,B52,B54,B55,B56,B57,B58,B60,B61,B62,B64,B70,B72,B75,B77,B8,B82,B83,B85,B86,B87,B89,B92,B95,B96,B97,B98,C1,C13,C15,C16,C18,C19,C20,C21,C23,C25,C27,C31,C33,C36,C37,C38,C44,C46,C48,C50,C53,C55,C57,C60,C61,C63,C70,C71,C73,C74,C75,C77,C80,C81,C84,C86,C87,D1,D2,D6,D8
lof_cds	Chr5	32523428	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	5	B108,B22,B58,C18,C87
typical_cds_rare	Chr5	32523428	G	GT	INDEL	1bp_insertion	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	5	B108,B22,B58,C18,C87
lof_cds	Chr5	32523466	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	156	A1,A10,A11,A14,A15,A2,A20,A24,A4,A5,A6,A7,A8,A9,B101,B102,B103,B105,B106,B108,B110,B111,B112,B118,B119,B12,B120,B121,B123,B124,B125,B126,B127,B128,B13,B130,B132,B135,B136,B137,B138,B139,B14,B140,B15,B16,B18,B20,B22,B24,B25,B28,B29,B3,B30,B32,B33,B35,B36,B37,B38,B39,B4,B40,B41,B43,B44,B45,B47,B48,B49,B5,B50,B51,B52,B54,B55,B56,B57,B58,B59,B60,B61,B62,B64,B69,B70,B72,B74,B75,B76,B77,B8,B82,B83,B84,B85,B86,B87,B88,B89,B90,B91,B92,B96,B97,B98,C1,C13,C14,C15,C16,C18,C19,C20,C21,C23,C24,C25,C26,C27,C28,C31,C33,C34,C36,C37,C44,C46,C47,C48,C50,C51,C53,C55,C57,C60,C61,C62,C63,C64,C66,C69,C70,C71,C73,C74,C75,C76,C77,C80,C81,C84,C87,D2,D8
lof_cds	Chr5	32523468	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	3	A13,B79,C2
typical_cds_rare	Chr5	32523468	AGG	A	INDEL	2bp_deletion	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	3	A13,B79,C2
lof_cds	Chr5	32523470	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	153	A1,A10,A11,A14,A15,A2,A20,A24,A4,A5,A6,A7,A8,A9,B101,B102,B103,B105,B106,B108,B110,B111,B112,B118,B119,B12,B120,B121,B123,B124,B125,B126,B127,B128,B13,B130,B132,B135,B136,B137,B138,B139,B14,B140,B15,B16,B18,B20,B22,B25,B28,B29,B3,B30,B32,B33,B35,B36,B37,B38,B39,B4,B40,B41,B43,B44,B45,B47,B48,B49,B5,B50,B51,B52,B54,B55,B56,B57,B58,B59,B60,B61,B62,B69,B70,B72,B74,B75,B76,B77,B8,B82,B83,B84,B85,B86,B87,B88,B89,B90,B91,B92,B96,B97,B98,C1,C13,C14,C15,C16,C18,C19,C20,C21,C23,C24,C25,C26,C27,C28,C31,C33,C34,C36,C37,C44,C46,C47,C48,C50,C51,C53,C55,C57,C60,C61,C62,C63,C64,C66,C69,C70,C73,C74,C75,C76,C77,C80,C81,C84,C87,D2,D8
lof_cds	Chr5	32523472	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	153	A1,A10,A11,A14,A15,A2,A20,A24,A4,A5,A6,A7,A8,A9,B101,B102,B103,B105,B106,B108,B110,B111,B112,B118,B119,B12,B120,B121,B123,B124,B125,B126,B127,B128,B13,B130,B132,B135,B136,B137,B138,B139,B14,B140,B15,B16,B18,B20,B22,B25,B28,B29,B3,B30,B32,B33,B35,B36,B37,B38,B39,B4,B40,B41,B43,B44,B45,B47,B48,B49,B5,B50,B51,B52,B54,B55,B56,B57,B58,B59,B60,B61,B62,B69,B70,B72,B74,B75,B76,B77,B8,B82,B83,B84,B85,B86,B87,B88,B89,B90,B91,B92,B96,B97,B98,C1,C13,C14,C15,C16,C18,C19,C20,C21,C23,C24,C25,C26,C27,C28,C31,C33,C34,C36,C37,C44,C46,C47,C48,C50,C51,C53,C55,C57,C60,C61,C62,C63,C64,C66,C69,C70,C73,C74,C75,C76,C77,C80,C81,C84,C87,D2,D8
lof_cds	Chr5	32523479	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	153	A1,A10,A11,A14,A15,A2,A20,A24,A4,A5,A6,A7,A8,A9,B101,B102,B103,B105,B106,B108,B110,B111,B112,B118,B119,B12,B120,B121,B123,B124,B125,B126,B127,B128,B13,B130,B132,B135,B136,B137,B138,B139,B14,B140,B15,B16,B18,B20,B22,B25,B28,B29,B3,B30,B32,B33,B35,B36,B37,B38,B39,B4,B40,B41,B43,B44,B45,B47,B48,B49,B5,B50,B51,B52,B54,B55,B56,B57,B58,B59,B60,B61,B62,B69,B70,B72,B74,B75,B76,B77,B8,B82,B83,B84,B85,B86,B87,B88,B89,B90,B91,B92,B96,B97,B98,C1,C13,C14,C15,C16,C18,C19,C20,C21,C23,C24,C25,C26,C27,C28,C31,C33,C34,C36,C37,C44,C46,C47,C48,C50,C51,C53,C55,C57,C60,C61,C62,C63,C64,C66,C69,C70,C73,C74,C75,C76,C77,C80,C81,C84,C87,D2,D8
typical_cds_rare	Chr5	32523490	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	5	A13,B108,B79,C2,C23
typical_cds_rare	Chr5	32523537	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	1	B13
typical_cds_rare	Chr5	32523555	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	1	B36
typical_cds_rare	Chr5	32523628	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	1	B13
typical_cds_rare	Chr5	32523635	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	4	B115,B58,C18,C44
typical_cds_rare	Chr5	32524294	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	1	A16
lof_cds	Chr5	32524303	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	1	B47
typical_cds_rare	Chr5	32524303	T	TA	INDEL	1bp_insertion	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	1	B47
typical_cds_rare	Chr5	32524357	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	5	B13,C1,C36,C48,C73
typical_cds_rare	Chr5	32524661	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	1	C74
typical_cds_rare	Chr5	32524689	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	1	B13
lof_cds	Chr5	32524953	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	20	A15,A2,B131,B132,B137,B28,B36,B4,B45,B59,B69,B96,C11,C17,C22,C23,C37,C50,C72,C80
lof_cds	Chr5	32524955	CCT	C	INDEL	2bp_deletion	frameshift_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	20	A15,A2,B131,B132,B137,B28,B36,B4,B45,B59,B69,B96,C11,C17,C22,C23,C37,C50,C72,C80
typical_cds_rare	Chr5	32524972	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	1	B13
lof_cds	Chr5	32525192	GAC	G	INDEL	2bp_deletion	frameshift_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	89	A1,A11,A16,A18,A20,A21,A24,A4,A5,A6,A7,A9,B101,B105,B106,B111,B112,B118,B120,B123,B124,B125,B126,B135,B136,B137,B138,B139,B140,B15,B18,B19,B24,B25,B27,B29,B39,B42,B43,B49,B5,B51,B56,B58,B59,B62,B64,B70,B72,B74,B82,B83,B84,B87,B88,B89,B92,B95,B96,B98,B99,C14,C17,C21,C25,C26,C28,C31,C32,C40,C44,C46,C47,C50,C51,C53,C54,C55,C57,C62,C64,C66,C68,C70,C73,C75,C82,C84,D3
lof_cds	Chr5	32525195	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	89	A1,A11,A16,A18,A20,A21,A24,A4,A5,A6,A7,A9,B101,B105,B106,B111,B112,B118,B120,B123,B124,B125,B126,B135,B136,B137,B138,B139,B140,B15,B18,B19,B24,B25,B27,B29,B39,B42,B43,B49,B5,B51,B56,B58,B59,B62,B64,B70,B72,B74,B82,B83,B84,B87,B88,B89,B92,B95,B96,B98,B99,C14,C17,C21,C25,C26,C28,C31,C32,C40,C44,C46,C47,C50,C51,C53,C54,C55,C57,C62,C64,C66,C68,C70,C73,C75,C82,C84,D3
typical_cds_rare	Chr5	32525648	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	1	C77
typical_cds_rare	Chr5	32525670	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	1	C77
typical_cds_rare	Chr5	32525704	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	1	C77
typical_cds_rare	Chr5	32525757	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	1	C22
typical_cds_rare	Chr5	32525927	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	1	B13
typical_cds_rare	Chr5	32526075	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	2	B103,C12
typical_cds_rare	Chr5	32526174	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	4	B130,C47,C64,C66
lof_cds	Chr5	32526384	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	22	A16,A20,A8,B118,B12,B126,B128,B131,B19,B37,B38,B39,B41,B46,B58,B67,B79,B84,C10,C15,C25,C45
typical_cds_rare	Chr5	32526403	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	1	D11
typical_cds_rare	Chr5	32527438	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	1	C54
lof_cds	Chr5	32527558	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	1	B23
typical_cds_rare	Chr5	32527558	CT	C	INDEL	1bp_deletion	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	1	B23
typical_cds_rare	Chr5	32527606	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	1	B52
typical_cds_rare	Chr5	32527741	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1,rna-XM_057910398.1	1	C77
typical_cds_rare	Chr5	32531798	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1	5	B74,B75,B77,C74,C83
lof_cds	Chr5	32532063	A	ACT	INDEL	2bp_insertion	frameshift_variant	LOC130986870	SmilChr05G002782	130986870	rna-XM_057910397.1	130	A11,A14,A15,A16,A22,A4,A5,A7,B1,B100,B101,B102,B103,B105,B109,B11,B110,B114,B115,B117,B120,B121,B125,B127,B132,B136,B14,B16,B18,B19,B20,B22,B23,B27,B29,B3,B30,B32,B33,B34,B35,B41,B44,B46,B47,B48,B54,B55,B57,B59,B6,B63,B65,B68,B7,B70,B72,B73,B78,B79,B8,B82,B85,B86,B89,B9,B90,B91,B92,B93,B94,B95,B97,B98,B99,C10,C11,C12,C13,C15,C18,C2,C21,C23,C24,C26,C27,C28,C3,C30,C31,C36,C37,C39,C41,C45,C46,C47,C49,C50,C53,C54,C56,C57,C58,C60,C61,C62,C63,C64,C66,C67,C69,C70,C74,C77,C79,C80,C81,C82,C83,C84,C85,C86,C87,D10,D11,D4,D5,D8