source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr5	44057521	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	23	A20,A4,A7,A8,B114,B118,B12,B126,B19,B25,B53,B63,B67,B73,C15,C33,C34,C54,C57,C70,C73,C78,C84
typical_cds_rare	Chr5	44057536	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	1	A18
typical_cds_rare	Chr5	44057538	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	B122,C34
typical_cds_rare	Chr5	44057574	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	1	D11
typical_cds_rare	Chr5	44057586	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	C62,D2
typical_cds_rare	Chr5	44057593	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	B122,C34
typical_cds_rare	Chr5	44057614	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	1	B80
typical_cds_rare	Chr5	44057646	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	1	B80
typical_cds_rare	Chr5	44057647	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	1	B22
typical_cds_rare	Chr5	44057661	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	3	C61,C62,D2
lof_cds	Chr5	44057682	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	8	B3,B93,B98,C56,C66,C68,C83,D4
lof_cds	Chr5	44057685	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	8	B3,B93,B98,C56,C66,C68,C83,D4
typical_cds_rare	Chr5	44057710	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	5	A2,B110,C60,C62,C82
typical_cds_rare	Chr5	44057735	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	C61,D2
lof_cds	Chr5	44057737	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	6	B63,B83,B98,C14,C56,C83
lof_cds	Chr5	44057755	C	CCA	INDEL	2bp_insertion	frameshift_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	1	B98
typical_cds_rare	Chr5	44057755	C	CCA	INDEL	2bp_insertion	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	1	B98
typical_cds_rare	Chr5	44057759	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	B98,C14
lof_cds	Chr5	44057761	TAG	T	INDEL	2bp_deletion	frameshift_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	B98,C14
typical_cds_rare	Chr5	44057761	TAG	T	INDEL	2bp_deletion	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	B98,C14
typical_cds_rare	Chr5	44057811	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	4	B133,B91,C19,D10
typical_cds_rare	Chr5	44057825	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	5	B139,B14,B61,C5,D6
typical_cds_rare	Chr5	44057826	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	B122,C34
typical_cds_rare	Chr5	44057837	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	1	B122
lof_cds	Chr5	44057848	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	47	A1,A15,A2,A21,A9,B1,B101,B102,B112,B115,B117,B119,B121,B135,B139,B19,B23,B26,B27,B32,B40,B54,B61,B66,B68,B70,B72,B77,B8,B82,B87,B89,C22,C26,C30,C36,C4,C40,C48,C50,C64,C66,C77,C78,C87,D5,D8
typical_cds_rare	Chr5	44057877	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	1	B3
typical_cds_rare	Chr5	44057879	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	1	B40
lof_cds	Chr5	44057978	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	21	A24,A25,A5,B126,B128,B130,B21,B28,B49,B51,B52,B90,B92,C1,C41,C44,C47,C51,C55,C65,C80
lof_cds	Chr5	44057979	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	3	B122,B80,C34
typical_cds_rare	Chr5	44057979	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	3	B122,B80,C34
lof_cds	Chr5	44058055	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	B100,B35
typical_cds_rare	Chr5	44058055	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	B100,B35
lof_cds	Chr5	44058059	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	B100,B35
typical_cds_rare	Chr5	44058059	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	B100,B35
typical_cds_rare	Chr5	44058071	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	B100,B35
typical_cds_rare	Chr5	44058076	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	B100,B35
typical_cds_rare	Chr5	44058080	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	B100,B35
typical_cds_rare	Chr5	44058100	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	A2,D11
lof_cds	Chr5	44058121	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	C56,C82
typical_cds_rare	Chr5	44058121	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	C56,C82
lof_cds	Chr5	44058124	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	5	B124,B2,B38,C56,C82
typical_cds_rare	Chr5	44058124	TGA	T	INDEL	2bp_deletion	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	5	B124,B2,B38,C56,C82
lof_cds	Chr5	44058126	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	8	A2,B139,B14,B26,B61,B77,C5,D6
lof_cds	Chr5	44058136	A	ACC	INDEL	2bp_insertion	frameshift_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	34	A21,B1,B101,B103,B111,B117,B132,B16,B3,B33,B35,B77,B83,B93,B98,C14,C2,C21,C27,C31,C32,C35,C40,C56,C64,C65,C66,C68,C77,C80,C81,C83,D4,D5
lof_cds	Chr5	44058151	CTG	C	INDEL	2bp_deletion	frameshift_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	6	B124,B2,B38,C56,C69,C82
lof_cds	Chr5	44058155	T	TTA	INDEL	2bp_insertion	frameshift_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	6	B124,B2,B38,C56,C69,C82
typical_cds_rare	Chr5	44058163	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	B54,C63
lof_cds	Chr5	44058189	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	B98,C56
typical_cds_rare	Chr5	44058189	CG	C	INDEL	1bp_deletion	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	B98,C56
lof_cds	Chr5	44058201	GTA	G	INDEL	2bp_deletion	frameshift_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	B98,C56
typical_cds_rare	Chr5	44058201	GTA	G	INDEL	2bp_deletion	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	B98,C56
typical_cds_rare	Chr5	44058209	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	5	B122,B54,C34,C37,C63
typical_cds_rare	Chr5	44058227	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	B15,B93
typical_cds_rare	Chr5	44058242	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	4	B15,B54,C37,C63
lof_cds	Chr5	44058257	C	CGA	INDEL	2bp_insertion	frameshift_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	1	B15
typical_cds_rare	Chr5	44058257	C	CGA	INDEL	2bp_insertion	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	1	B15
typical_cds_rare	Chr5	44058270	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	3	B122,B80,C34
typical_cds_rare	Chr5	44058280	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	5	A2,B110,C60,C62,C82
typical_cds_rare	Chr5	44058299	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	B15,C15
lof_cds	Chr5	44058315	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	5	A25,B42,C18,C43,C61
typical_cds_rare	Chr5	44058315	A	AGG	INDEL	2bp_insertion	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	5	A25,B42,C18,C43,C61
lof_cds	Chr5	44058318	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	5	A25,B42,C18,C43,C61
typical_cds_rare	Chr5	44058318	ATG	A	INDEL	2bp_deletion	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	5	A25,B42,C18,C43,C61
lof_cds	Chr5	44058331	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	5	A25,B42,C18,C43,C61
typical_cds_rare	Chr5	44058331	C	CAT	INDEL	2bp_insertion	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	5	A25,B42,C18,C43,C61
lof_cds	Chr5	44058333	GTT	G	INDEL	2bp_deletion	frameshift_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	5	A25,B42,C18,C43,C61
typical_cds_rare	Chr5	44058333	GTT	G	INDEL	2bp_deletion	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	5	A25,B42,C18,C43,C61
typical_cds_rare	Chr5	44058354	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	4	B48,B80,C61,D2
typical_cds_rare	Chr5	44058376	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	1	B122
typical_cds_rare	Chr5	44058377	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	4	A18,B48,C61,D2
typical_cds_rare	Chr5	44058384	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	1	B80
typical_cds_rare	Chr5	44058424	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	1	B80
typical_cds_rare	Chr5	44058503	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	B122,C34
lof_cds	Chr5	44058536	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	21	A20,A4,A7,A8,B114,B118,B12,B126,B19,B25,B53,B63,B67,C15,C33,C34,C54,C57,C70,C78,C84
typical_cds_rare	Chr5	44058568	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	1	B96
typical_cds_rare	Chr5	44058577	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	1	B96
typical_cds_rare	Chr5	44058590	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	B122,C34
typical_cds_rare	Chr5	44058653	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025974	SmilChr05G003347	131025974	rna-XM_057955755.1	2	A2,D11