source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr5	46538359	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	2	B20,C58
typical_cds_rare	Chr5	46538359	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	2	B20,C58
typical_cds_rare	Chr5	46538366	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	C35
lof_cds	Chr5	46538381	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	4	B24,B71,D10,D11
typical_cds_rare	Chr5	46538381	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	4	B24,B71,D10,D11
typical_cds_rare	Chr5	46538401	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	B55
typical_cds_rare	Chr5	46538436	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	D11
typical_cds_rare	Chr5	46538439	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	B32
typical_cds_rare	Chr5	46538462	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	B35
typical_cds_rare	Chr5	46538472	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	3	B127,D2,D8
typical_cds_rare	Chr5	46538487	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	3	B108,B122,B94
typical_cds_rare	Chr5	46538594	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	2	C11,C69
typical_cds_rare	Chr5	46538614	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	A5
typical_cds_rare	Chr5	46538646	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	B21
typical_cds_rare	Chr5	46538838	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	A5
typical_cds_rare	Chr5	46538858	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	2	B22,B31
lof_cds	Chr5	46538937	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	42	A1,A18,A20,A3,A6,B1,B100,B113,B12,B124,B127,B13,B14,B2,B30,B48,B5,B54,B57,B59,B72,B74,B76,B87,B90,B92,C16,C19,C20,C21,C24,C32,C41,C42,C47,C55,C61,C68,C70,C79,D2,D9
typical_cds_rare	Chr5	46538944	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	3	A10,D4,D9
lof_cds	Chr5	46538966	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	41	A1,A18,A20,A3,A6,B1,B100,B113,B124,B127,B13,B14,B2,B30,B48,B5,B54,B57,B59,B72,B74,B76,B87,B90,B92,C16,C19,C20,C21,C24,C32,C41,C42,C47,C55,C61,C68,C70,C79,D2,D9
typical_cds_rare	Chr5	46538975	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	5	B117,B46,B7,C11,C69
typical_cds_rare	Chr5	46538989	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	3	A10,D4,D9
lof_cds	Chr5	46538993	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	35	A1,A18,A6,B1,B100,B104,B113,B124,B13,B14,B2,B30,B48,B5,B57,B59,B72,B74,B76,B90,B92,C16,C19,C20,C21,C24,C32,C41,C42,C47,C55,C61,C68,C70,C79
lof_cds	Chr5	46539031	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	20	B108,B11,B122,B125,B131,B134,B18,B44,B58,B6,B94,B99,C32,C44,C63,C68,C73,C8,C87,D11
typical_cds_rare	Chr5	46539034	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	C12
typical_cds_rare	Chr5	46539104	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	A5
typical_cds_rare	Chr5	46539105	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	3	A10,D4,D9
lof_cds	Chr5	46539123	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	B22
typical_cds_rare	Chr5	46539123	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	B22
lof_cds	Chr5	46539131	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	24	A11,A24,A25,A3,A5,A6,B100,B126,B128,B130,B51,B52,B80,B81,B90,B92,C1,C41,C44,C47,C51,C55,C80,D7
typical_cds_rare	Chr5	46539153	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	4	A6,B100,B80,C41
lof_cds	Chr5	46539154	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	37	A18,A2,A4,A7,B105,B109,B114,B123,B127,B135,B136,B138,B140,B20,B28,B45,B50,B55,B70,B82,B94,C1,C12,C18,C29,C30,C43,C46,C49,C5,C58,C72,C76,C78,C8,D2,D4
typical_cds_rare	Chr5	46539167	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	B53
typical_cds_rare	Chr5	46539256	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	C34
lof_cds	Chr5	46539303	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	C10
typical_cds_rare	Chr5	46539303	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	C10
typical_cds_rare	Chr5	46539311	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	3	B108,B122,B94
lof_cds	Chr5	46539316	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	38	A21,A7,A9,B103,B125,B13,B138,B139,B15,B27,B3,B32,B34,B4,B42,B43,B47,B60,B65,B74,B77,B78,C13,C2,C45,C5,C50,C51,C56,C57,C65,C72,C78,C83,C85,D10,D6,D7
lof_cds	Chr5	46539317	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	B135
typical_cds_rare	Chr5	46539317	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	B135
typical_cds_rare	Chr5	46539318	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	B112
lof_cds	Chr5	46539409	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	4	B1,B104,B2,B37
typical_cds_rare	Chr5	46539409	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	4	B1,B104,B2,B37
lof_cds	Chr5	46539410	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	62	A11,A21,A24,A25,A3,A5,A6,A7,A9,B100,B103,B125,B126,B128,B13,B130,B138,B139,B15,B27,B3,B32,B34,B4,B42,B43,B47,B49,B51,B52,B60,B65,B74,B75,B77,B78,B80,B81,B90,B92,C1,C13,C2,C41,C44,C45,C47,C5,C50,C51,C55,C56,C57,C65,C72,C78,C80,C83,C85,D10,D6,D7
lof_cds	Chr5	46539420	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	2	D10,D11
typical_cds_rare	Chr5	46539420	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	2	D10,D11
lof_cds	Chr5	46539443	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	B59
typical_cds_rare	Chr5	46539443	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	B59
lof_cds	Chr5	46539516	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	13	B100,B11,B136,B30,B35,B66,B89,C10,C34,C44,C55,C7,D5
typical_cds_rare	Chr5	46539575	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	3	B21,B68,C48
typical_cds_rare	Chr5	46539583	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	4	B110,B93,C62,C82
typical_cds_rare	Chr5	46539612	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	5	B20,B48,B98,C61,C80
typical_cds_rare	Chr5	46539614	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	2	B93,C83
typical_cds_rare	Chr5	46539616	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	D10
typical_cds_rare	Chr5	46539620	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	2	B93,C83
typical_cds_rare	Chr5	46539623	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	2	B93,C83
typical_cds_rare	Chr5	46540134	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	C35
typical_cds_rare	Chr5	46540153	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	B24
typical_cds_rare	Chr5	46540196	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	B21
typical_cds_rare	Chr5	46540197	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	B31
typical_cds_rare	Chr5	46540207	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	3	A10,D4,D9
typical_cds_rare	Chr5	46540209	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	3	B71,D10,D11
lof_cds	Chr5	46540228	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	67	A10,A14,A18,A19,A22,B101,B102,B109,B111,B117,B120,B123,B129,B133,B17,B2,B20,B22,B24,B29,B33,B34,B35,B36,B41,B46,B48,B53,B60,B63,B64,B66,B69,B7,B71,B76,B8,B81,B82,B83,B84,B85,B86,B88,B91,B95,B98,C10,C11,C15,C17,C18,C26,C27,C28,C29,C30,C42,C52,C53,C61,C69,C77,C80,C84,C86,C9
typical_cds_rare	Chr5	46540241	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	4	B28,B37,B93,C38
lof_cds	Chr5	46540249	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	B135
typical_cds_rare	Chr5	46540249	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	B135
typical_cds_rare	Chr5	46540257	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	2	B22,B31
typical_cds_rare	Chr5	46540271	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	B31
typical_cds_rare	Chr5	46540317	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	3	B71,D10,D11
typical_cds_rare	Chr5	46540355	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	B32
typical_cds_rare	Chr5	46540362	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	C10
typical_cds_rare	Chr5	46540389	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	5	B20,B48,B98,C61,C80
typical_cds_rare	Chr5	46540391	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	3	B71,D10,D11
typical_cds_rare	Chr5	46540403	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	2	C24,C3
typical_cds_rare	Chr5	46540425	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	A5
lof_cds	Chr5	46540428	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	41	A21,A7,A9,B103,B125,B13,B138,B139,B15,B27,B3,B32,B34,B4,B42,B43,B47,B60,B65,B71,B74,B75,B77,B78,C13,C2,C45,C47,C5,C50,C51,C56,C57,C65,C72,C78,C85,D10,D11,D6,D7
typical_cds_rare	Chr5	46540437	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	B22
typical_cds_rare	Chr5	46540458	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	3	B22,B31,C35
typical_cds_rare	Chr5	46540466	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	B31
typical_cds_rare	Chr5	46589905	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	4	B60,C40,C67,C70
typical_cds_rare	Chr5	46589962	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	5	B113,B47,C40,C67,D5
typical_cds_rare	Chr5	46589975	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	B53
typical_cds_rare	Chr5	46589981	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131026015	SmilChr05G003496	131026015	rna-XM_057955795.1	1	A4