source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr5	47138613	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	1	B21
typical_cds_rare	Chr5	47138764	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	4	B131,B41,B46,B53
typical_cds_rare	Chr5	47138773	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	1	B101
lof_cds	Chr5	47138782	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	1	B119
typical_cds_rare	Chr5	47138782	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	1	B119
typical_cds_rare	Chr5	47138796	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	1	B119
typical_cds_rare	Chr5	47138797	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	1	B33
typical_cds_rare	Chr5	47138808	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	4	B131,B41,B46,B53
typical_cds_rare	Chr5	47138811	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	1	D11
lof_cds	Chr5	47138827	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	86	A1,A18,A20,A23,A4,A5,A6,B1,B100,B101,B104,B107,B11,B110,B113,B115,B12,B121,B126,B13,B131,B134,B135,B137,B14,B17,B18,B2,B27,B30,B32,B35,B37,B4,B40,B48,B5,B57,B59,B6,B67,B72,B74,B76,B79,B88,B89,B90,B92,B99,C14,C15,C16,C19,C20,C21,C24,C31,C32,C35,C36,C39,C42,C44,C47,C48,C55,C56,C58,C6,C61,C62,C63,C67,C68,C7,C70,C73,C77,C79,C8,C80,C82,C87,D11,D6
typical_cds_rare	Chr5	47138850	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	3	B59,B69,B9
typical_cds_rare	Chr5	47138859	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	2	B38,B39
lof_cds	Chr5	47138863	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	2	C46,C83
typical_cds_rare	Chr5	47138863	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	2	C46,C83
typical_cds_rare	Chr5	47138866	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	2	C46,C83
typical_cds_rare	Chr5	47138885	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	2	B21,B33
typical_cds_rare	Chr5	47138887	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	2	C46,C83
lof_cds	Chr5	47138944	G	GTT	INDEL	2bp_insertion	frameshift_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	2	C46,C83
typical_cds_rare	Chr5	47138944	G	GTT	INDEL	2bp_insertion	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	2	C46,C83
lof_cds	Chr5	47138948	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	2	C46,C83
typical_cds_rare	Chr5	47138948	ATG	A	INDEL	2bp_deletion	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	2	C46,C83
typical_cds_rare	Chr5	47138957	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	2	B21,B31
typical_cds_rare	Chr5	47138968	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	1	B71
typical_cds_rare	Chr5	47138974	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	2	C46,C83
lof_cds	Chr5	47138990	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	3	B110,C62,C82
typical_cds_rare	Chr5	47138990	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	3	B110,C62,C82
typical_cds_rare	Chr5	47138995	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	2	B21,B31
lof_cds	Chr5	47139023	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	9	A15,A7,B105,B109,B114,B123,B127,C30,C49
lof_cds	Chr5	47139024	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	67	A10,A13,A14,A22,B108,B111,B112,B115,B117,B122,B124,B128,B132,B135,B137,B139,B14,B15,B18,B23,B26,B36,B4,B40,B42,B43,B44,B46,B53,B55,B56,B57,B62,B71,B75,B78,B79,B86,B9,B94,B96,B99,C14,C16,C22,C23,C25,C28,C33,C37,C38,C39,C4,C40,C45,C59,C6,C60,C62,C64,C66,C67,C71,C74,D3,D4,D5
lof_cds	Chr5	47139068	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	1	B71
typical_cds_rare	Chr5	47139068	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	1	B71
lof_cds	Chr5	47139070	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	41	A25,A3,A4,A8,B104,B118,B127,B130,B132,B136,B138,B20,B28,B35,B37,B50,B52,B54,B60,B69,B80,B87,B9,B91,B93,B94,C11,C12,C25,C33,C38,C46,C5,C53,C58,C69,C71,D11,D2,D3,D9
lof_cds	Chr5	47139094	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	29	A10,A14,A16,A19,B10,B108,B109,B11,B123,B129,B17,B2,B29,B36,B47,B64,B66,B69,B76,B81,B83,B84,B88,B95,C17,C27,C53,C75,C86
typical_cds_rare	Chr5	47139112	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	3	B134,C3,C8
typical_cds_rare	Chr5	47139115	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	4	B134,C3,C37,C8
typical_cds_rare	Chr5	47139117	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	4	A8,B24,B97,C62
typical_cds_rare	Chr5	47139145	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	1	C6
lof_cds	Chr5	47139147	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	71	A10,A13,A14,A22,B108,B111,B112,B115,B117,B122,B124,B128,B132,B135,B137,B139,B14,B15,B18,B23,B26,B36,B4,B40,B42,B43,B44,B46,B53,B55,B56,B57,B61,B62,B71,B75,B78,B79,B86,B9,B94,B96,B99,C14,C16,C22,C23,C25,C28,C33,C37,C38,C39,C4,C40,C43,C45,C59,C6,C60,C62,C64,C66,C67,C71,C74,C85,D1,D3,D4,D5
typical_cds_rare	Chr5	47139174	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	1	B93
lof_cds	Chr5	47139178	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	12	B105,B115,B3,B33,B72,B77,B80,B98,C13,C30,C50,D1
typical_cds_rare	Chr5	47139190	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	5	B48,B98,C35,C61,C80
lof_cds	Chr5	47139217	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	2	B38,B39
typical_cds_rare	Chr5	47139217	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	2	B38,B39
typical_cds_rare	Chr5	47139223	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	5	A8,B122,B24,B97,C62
typical_cds_rare	Chr5	47139231	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	4	A1,B133,B72,C86
typical_cds_rare	Chr5	47139245	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	3	B33,B72,D1
lof_cds	Chr5	47139259	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	73	A1,A11,A15,A2,A23,A3,A6,A7,B100,B105,B109,B114,B120,B122,B123,B127,B133,B140,B20,B22,B24,B28,B29,B34,B41,B44,B58,B60,B7,B70,B71,B72,B73,B8,B80,B82,B83,B85,B91,B97,B98,C10,C11,C15,C18,C2,C20,C24,C28,C29,C3,C30,C32,C35,C37,C41,C42,C49,C52,C54,C60,C68,C69,C72,C77,C78,C84,C86,C9,D10,D2,D7,D8
lof_cds	Chr5	47139282	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	64	A10,A13,A14,A22,B108,B111,B112,B117,B122,B124,B128,B132,B137,B139,B14,B18,B23,B26,B36,B4,B40,B42,B43,B44,B46,B53,B55,B56,B61,B62,B71,B75,B78,B79,B86,B9,B94,B99,C12,C14,C16,C22,C23,C25,C28,C33,C37,C38,C39,C4,C40,C45,C49,C59,C6,C62,C64,C66,C67,C71,C85,D1,D3,D5
typical_cds_rare	Chr5	47139352	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	2	B40,C33
typical_cds_rare	Chr5	47139373	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	3	A8,B122,B71
typical_cds_rare	Chr5	47139375	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	5	B48,B98,C35,C61,C80
typical_cds_rare	Chr5	47139381	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	1	B97
typical_cds_rare	Chr5	47139394	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	1	D11
typical_cds_rare	Chr5	47139398	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	3	B134,C3,C8
typical_cds_rare	Chr5	47139459	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	4	B131,B41,B46,B53
lof_cds	Chr5	47139460	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	69	A10,A13,A14,A22,B108,B111,B112,B115,B117,B122,B124,B128,B132,B135,B137,B139,B15,B18,B23,B26,B36,B4,B40,B42,B44,B46,B53,B55,B56,B57,B61,B62,B71,B75,B78,B79,B86,B9,B94,B96,B99,C12,C14,C16,C22,C23,C25,C28,C33,C37,C38,C39,C4,C40,C43,C45,C49,C59,C6,C62,C64,C66,C71,C74,C85,D1,D3,D4,D5
typical_cds_rare	Chr5	47139485	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	4	B140,B3,B43,C24
typical_cds_rare	Chr5	47139507	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	2	C20,D10
typical_cds_rare	Chr5	47139560	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	4	B118,B138,B60,C25
typical_cds_rare	Chr5	47139585	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	3	B134,C3,C8
typical_cds_rare	Chr5	47139609	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	3	B21,B31,B33
typical_cds_rare	Chr5	47139655	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	5	B48,B98,C35,C61,C80
lof_cds	Chr5	47139664	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	42	A10,A14,A16,A19,B10,B101,B102,B108,B109,B11,B111,B119,B123,B129,B133,B17,B2,B21,B24,B29,B31,B36,B47,B64,B66,B69,B76,B81,B83,B84,B88,B95,C1,C17,C26,C27,C43,C53,C75,C76,C9,D4
typical_cds_rare	Chr5	47139695	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	5	B119,B24,C1,C43,C76
typical_cds_rare	Chr5	47139698	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	5	B119,B24,C1,C43,C76
lof_cds	Chr5	47139711	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	33	A10,A16,A19,B10,B108,B109,B11,B111,B119,B123,B129,B133,B17,B2,B24,B29,B36,B47,B64,B66,B69,B81,B83,B84,B88,C1,C17,C26,C27,C43,C53,C75,C76
typical_cds_rare	Chr5	47139717	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	1	A22
lof_cds	Chr5	47139718	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	3	B134,C3,C8
typical_cds_rare	Chr5	47139718	C	CG	INDEL	1bp_insertion	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	3	B134,C3,C8
typical_cds_rare	Chr5	47139720	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	4	B122,B71,B75,C62
typical_cds_rare	Chr5	47139794	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	3	B24,C1,C76
typical_cds_rare	Chr5	47139804	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	2	B38,B39
lof_cds	Chr5	47139841	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	12	B101,B107,B115,B121,B32,B40,B54,B89,C26,C36,C48,C87
typical_cds_rare	Chr5	47139856	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	2	B24,C76
typical_cds_rare	Chr5	47139885	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	4	B7,C11,C69,C76
lof_cds	Chr5	47139899	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	3	B118,B138,C25
typical_cds_rare	Chr5	47139899	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	3	B118,B138,C25
lof_cds	Chr5	47139907	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	58	A1,A11,A15,A2,A23,A3,A6,A7,B105,B109,B114,B122,B123,B127,B131,B140,B20,B22,B24,B28,B29,B41,B44,B46,B53,B58,B7,B70,B71,B72,B73,B80,B82,B98,C11,C18,C2,C20,C24,C28,C29,C30,C32,C35,C41,C49,C54,C68,C69,C72,C77,C78,C86,D10,D11,D2,D7,D8
typical_cds_rare	Chr5	47139982	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	1	B24
lof_cds	Chr5	47140029	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	1	C82
typical_cds_rare	Chr5	47140029	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	1	C82
lof_cds	Chr5	47140039	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	2	B79,C22
typical_cds_rare	Chr5	47140039	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	2	B79,C22
lof_cds	Chr5	47140050	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	4	B20,B79,B98,C60
typical_cds_rare	Chr5	47140050	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	4	B20,B79,B98,C60
typical_cds_rare	Chr5	47140051	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	5	A19,B10,B129,B29,B95
typical_cds_rare	Chr5	47140053	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024598	SmilChr05G003526	131024598	rna-XM_057954107.1	1	B97